RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 OGFRQ9NZT2 677 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 LARSQ9P2J5 1176 aaKnown RBP12.74□□□□□ -0.37
PTCH1-208ENST00000430669 CCND2P30279 289 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 LRRC63Q05C16 580 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 RCSD1Q6JBY9 416 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 TSNARE1Q96NA8 513 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 ADD3Q9UEY8 706 aaKnown RBP12.74□□□□□ -0.37
PTCH1-208ENST00000430669 FAM160B1Q5W0V3 765 aa12.74□□□□□ -0.37
PTCH1-208ENST00000430669 KLHL30Q0D2K2 578 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 MAP3K14Q99558 947 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 ASNSP08243 561 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 PKNOX2Q96KN3 472 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 CLIC6Q96NY7 704 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 THAP9Q9H5L6 903 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 PLA2G4DQ86XP0 818 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 JPH2Q9BR39 696 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-208ENST00000430669 CD209Q9NNX6 404 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 STAT1P42224 750 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 PPP2R5AQ15172 486 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 CDC37Q16543 378 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-208ENST00000430669 ARFGAP2Q8N6H7 521 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 ENAHQ8N8S7 591 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-208ENST00000430669 CAPZA3Q96KX2 299 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 EXOSC10Q01780 885 aaKnown RBP12.73□□□□□ -0.37
PTCH1-208ENST00000430669 GRM4Q14833 912 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 PPP1R7Q15435 360 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 MCM6Q14566 821 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 ATP6V0A1Q93050 837 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 CALR3Q96L12 384 aaKnown RBP12.73□□□□□ -0.37
PTCH1-208ENST00000430669 PARP2Q9UGN5 583 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 ANKRD36CQ5JPF3 1778 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 TBC1D10CQ8IV04 446 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 TBCKQ8TEA7 893 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 DCP1AQ9NPI6 582 aaPredicted RBP12.73□□□□□ -0.37
PTCH1-208ENST00000430669 FANCLQ9NW38 375 aa12.73□□□□□ -0.37
PTCH1-208ENST00000430669 WHAMMP3Q1A5X7 153 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 KIF2CQ99661 725 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 DISC1Q9NRI5 854 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 MAN1B1Q9UKM7 699 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 A0A1W2PRG0 241 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 C8orf74Q6P047 294 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 SARM1Q6SZW1 724 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 KCTD1Q719H9 257 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 HERC5Q9UII4 1024 aaKnown RBP12.72□□□□□ -0.37
PTCH1-208ENST00000430669 KIAA1024Q9UPX6 916 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 CALCOCO2Q13137 446 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 ZNF577Q9BSK1 485 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 MIS12Q9H081 205 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 GPHNQ9NQX3 736 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-208ENST00000430669 HOMER2Q9NSB8 354 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 GOLGA8HP0CJ92 632 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 ENOX1Q8TC92 643 aaKnown RBP12.72□□□□□ -0.37
PTCH1-208ENST00000430669 INCENPQ9NQS7 918 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 PROM2Q8N271 834 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 MYH15Q9Y2K3 1946 aa12.72□□□□□ -0.37
PTCH1-208ENST00000430669 CRKP46108 304 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 SBK1Q52WX2 424 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 LSM14BQ9BX40 385 aaKnown RBP12.71□□□□□ -0.37
PTCH1-208ENST00000430669 TRIM6Q9C030 488 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-208ENST00000430669 PHLPP2Q6ZVD8 1323 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 ERICH4A6NGS2 130 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 TMEM110-MUSTN1A8MSY1 372 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 GSG1L2A8MUP6 293 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 DDX39AO00148 427 aaKnown RBP12.71□□□□□ -0.37
PTCH1-208ENST00000430669 LARGE1O95461 756 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 GBP1P32455 592 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 COPB1P53618 953 aaKnown RBP12.71□□□□□ -0.37
PTCH1-208ENST00000430669 TMEM206Q9H813 350 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 DBNDD1Q9H9R9 158 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 HAUS2Q9NVX0 235 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 BARHL2Q9NY43 387 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 TBC1D7Q9P0N9 293 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 ZBTB5O15062 677 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 FAM26FQ5R3K3 315 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 CYB5R4Q7L1T6 521 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 ZBTB8OSQ8IWT0 167 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 GIMAP8Q8ND71 665 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-208ENST00000430669 SAR1BQ9Y6B6 198 aa12.71□□□□□ -0.37
PTCH1-208ENST00000430669 SPOPO43791 374 aa12.71□□□□□ -0.38
PTCH1-208ENST00000430669 FKBP3Q00688 224 aaKnown RBP12.71□□□□□ -0.38
PTCH1-208ENST00000430669 TRMT44Q8IYL2 757 aaKnown RBP12.71□□□□□ -0.38
PTCH1-208ENST00000430669 SMCR8Q8TEV9 937 aaPredicted RBP12.71□□□□□ -0.38
PTCH1-208ENST00000430669 CNOT6LQ96LI5 555 aaKnown RBP12.71□□□□□ -0.38
PTCH1-208ENST00000430669 SP4Q02446 784 aa12.71□□□□□ -0.38
PTCH1-208ENST00000430669 AOC3Q16853 763 aa12.71□□□□□ -0.38
PTCH1-208ENST00000430669 NSMFQ6X4W1 530 aa12.71□□□□□ -0.38
PTCH1-208ENST00000430669 RRAGAQ7L523 313 aa12.71□□□□□ -0.38
PTCH1-208ENST00000430669 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.71□□□□□ -0.38
PTCH1-208ENST00000430669 RUNDC3BQ96NL0 473 aa12.71□□□□□ -0.38
PTCH1-208ENST00000430669 PANX2Q96RD6 677 aa12.71□□□□□ -0.38
PTCH1-208ENST00000430669 RAB17Q9H0T7 212 aa12.71□□□□□ -0.38
PTCH1-208ENST00000430669 FEM1BQ9UK73 627 aa12.71□□□□□ -0.38
PTCH1-208ENST00000430669 TESPA1A2RU30 521 aaPredicted RBP12.71□□□□□ -0.38
PTCH1-208ENST00000430669 K7ENM7 598 aa12.71□□□□□ -0.38
PTCH1-208ENST00000430669 MIS18BP1Q6P0N0 1132 aa12.71□□□□□ -0.38
PTCH1-208ENST00000430669 PLCB1Q9NQ66 1216 aa12.71□□□□□ -0.38
PTCH1-208ENST00000430669 BCS1LQ9Y276 419 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms