RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 ASTN1O14525 1302 aa29.03■■■□□ 2.24
CPNE1-212ENST00000430570 CPLX1O14810 134 aa29.02■■■□□ 2.24
CPNE1-212ENST00000430570 MTFR1Q15390 333 aa29.02■■■□□ 2.24
CPNE1-212ENST00000430570 PKN1Q16512 942 aa29.02■■■□□ 2.24
CPNE1-212ENST00000430570 WWC2Q6AWC2 1192 aa29.02■■■□□ 2.24
CPNE1-212ENST00000430570 HEATR3Q7Z4Q2 680 aa29.02■■■□□ 2.24
CPNE1-212ENST00000430570 MCF2L2Q86YR7 1114 aa29.02■■■□□ 2.24
CPNE1-212ENST00000430570 SLC26A6Q9BXS9 759 aa29.02■■■□□ 2.24
CPNE1-212ENST00000430570 CD2BP2O95400 341 aaKnown RBP29.01■■■□□ 2.23
CPNE1-212ENST00000430570 CFBP00751 764 aa29.01■■■□□ 2.23
CPNE1-212ENST00000430570 ST3GAL1Q11201 340 aa29.01■■■□□ 2.23
CPNE1-212ENST00000430570 TYW1BQ6NUM6 668 aa29.01■■■□□ 2.23
CPNE1-212ENST00000430570 SYTL5Q8TDW5 730 aaPredicted RBP29.01■■■□□ 2.23
CPNE1-212ENST00000430570 RNF26Q9BY78 433 aaPredicted RBP29.01■■■□□ 2.23
CPNE1-212ENST00000430570 COL20A1Q9P218 1284 aa29.01■■■□□ 2.23
CPNE1-212ENST00000430570 CTDNEP1O95476 244 aa29■■■□□ 2.23
CPNE1-212ENST00000430570 CACNB2Q08289 660 aaPredicted RBP29■■■□□ 2.23
CPNE1-212ENST00000430570 PFKFB3Q16875 520 aaPredicted RBP29■■■□□ 2.23
CPNE1-212ENST00000430570 GTF3C6Q969F1 213 aa29■■■□□ 2.23
CPNE1-212ENST00000430570 TINF2Q9BSI4 451 aa29■■■□□ 2.23
CPNE1-212ENST00000430570 DDX49Q9Y6V7 483 aaKnown RBP29■■■□□ 2.23
CPNE1-212ENST00000430570 UBXN2AP68543 259 aa28.99■■■□□ 2.23
CPNE1-212ENST00000430570 GHRHRQ02643 423 aa28.99■■■□□ 2.23
CPNE1-212ENST00000430570 MFSD14CQ5VZR4 134 aa28.99■■■□□ 2.23
CPNE1-212ENST00000430570 ZNF467Q7Z7K2 595 aaPredicted RBP28.99■■■□□ 2.23
CPNE1-212ENST00000430570 TAAR1Q96RJ0 339 aa28.99■■■□□ 2.23
CPNE1-212ENST00000430570 SCG2P13521 617 aa28.98■■■□□ 2.23
CPNE1-212ENST00000430570 PRKAR2AP13861 404 aaKnown RBP28.98■■■□□ 2.23
CPNE1-212ENST00000430570 HOXA13P31271 388 aaPredicted RBP28.98■■■□□ 2.23
CPNE1-212ENST00000430570 HSD17B4P51659 736 aa28.98■■■□□ 2.23
CPNE1-212ENST00000430570 SSRP1Q08945 709 aaKnown RBP28.98■■■□□ 2.23
CPNE1-212ENST00000430570 PRAMEF19Q5SWL8 479 aa28.98■■■□□ 2.23
CPNE1-212ENST00000430570 MAP3K21Q5TCX8 1036 aa28.98■■■□□ 2.23
CPNE1-212ENST00000430570 MAMDC4Q6UXC1 1216 aa28.98■■■□□ 2.23
CPNE1-212ENST00000430570 MAF1Q9H063 256 aa28.98■■■□□ 2.23
CPNE1-212ENST00000430570 RBBP6Q7Z6E9 1792 aaKnown RBP28.98■■■□□ 2.23
CPNE1-212ENST00000430570 STXBP3O00186 592 aa28.97■■■□□ 2.23
CPNE1-212ENST00000430570 ST18O60284 1047 aa28.97■■■□□ 2.23
CPNE1-212ENST00000430570 AKAP17AQ02040 695 aaKnown RBP28.97■■■□□ 2.23
CPNE1-212ENST00000430570 CPLX2Q6PUV4 134 aaKnown RBP28.97■■■□□ 2.23
CPNE1-212ENST00000430570 TRPV1Q8NER1 839 aa28.97■■■□□ 2.23
CPNE1-212ENST00000430570 UNC93B1Q9H1C4 597 aa28.97■■■□□ 2.23
CPNE1-212ENST00000430570 GCOM1H8Y6P7 765 aaPredicted RBP28.96■■■□□ 2.23
CPNE1-212ENST00000430570 SNAI1O95863 264 aaPredicted RBP28.96■■■□□ 2.23
CPNE1-212ENST00000430570 POLR2MP0CAP2 368 aa28.96■■■□□ 2.23
CPNE1-212ENST00000430570 BARHL2Q9NY43 387 aa28.96■■■□□ 2.23
CPNE1-212ENST00000430570 RBM27Q9P2N5 1060 aaKnown RBP28.96■■■□□ 2.23
CPNE1-212ENST00000430570 CCL5P13501 91 aa28.95■■■□□ 2.23
CPNE1-212ENST00000430570 CCND3P30281 292 aaPredicted RBP28.95■■■□□ 2.23
CPNE1-212ENST00000430570 ALDH5A1P51649 535 aaPredicted RBP28.95■■■□□ 2.23
CPNE1-212ENST00000430570 NAPAP54920 295 aa28.95■■■□□ 2.23
CPNE1-212ENST00000430570 TRIM22Q8IYM9 498 aa28.95■■■□□ 2.23
CPNE1-212ENST00000430570 MSL3Q8N5Y2 521 aaKnown RBP28.95■■■□□ 2.23
CPNE1-212ENST00000430570 SHISA4Q96DD7 197 aa28.95■■■□□ 2.23
CPNE1-212ENST00000430570 ZSCAN31Q96LW9 406 aaPredicted RBP28.95■■■□□ 2.23
CPNE1-212ENST00000430570 MAP3K20Q9NYL2 800 aaKnown RBP28.95■■■□□ 2.23
CPNE1-212ENST00000430570 MEIS2O14770 477 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 USP17L6PQ6QN14 398 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 ARMCX2Q7L311 632 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 CCDC83Q8IWF9 413 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 SAMD3Q8N6K7 520 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 PSTPIP2Q9H939 334 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.94■■■□□ 2.22
CPNE1-212ENST00000430570 ADD3Q9UEY8 706 aaKnown RBP28.94■■■□□ 2.22
CPNE1-212ENST00000430570 MCM3APO60318 1980 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 RPTORQ8N122 1335 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 SYNGAP1Q96PV0 1343 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 hCG_1984214I3L0E3 225 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 CYBAP13498 195 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 FCHSD1Q86WN1 690 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 ZNF713Q8N859 430 aaPredicted RBP28.94■■■□□ 2.22
CPNE1-212ENST00000430570 NSUN7Q8NE18 718 aaKnown RBP28.94■■■□□ 2.22
CPNE1-212ENST00000430570 AIFM3Q96NN9 605 aa28.94■■■□□ 2.22
CPNE1-212ENST00000430570 HMX1Q9NP08 348 aaPredicted RBP28.94■■■□□ 2.22
CPNE1-212ENST00000430570 ASB14A6NK59 587 aa28.93■■■□□ 2.22
CPNE1-212ENST00000430570 CCDC85CA6NKD9 419 aa28.93■■■□□ 2.22
CPNE1-212ENST00000430570 CDKL5O76039 1030 aa28.93■■■□□ 2.22
CPNE1-212ENST00000430570 DEXIO95424 95 aa28.93■■■□□ 2.22
CPNE1-212ENST00000430570 IL27Q8NEV9 243 aa28.93■■■□□ 2.22
CPNE1-212ENST00000430570 DNERQ8NFT8 737 aa28.93■■■□□ 2.22
CPNE1-212ENST00000430570 RNF208Q9H0X6 261 aa28.93■■■□□ 2.22
CPNE1-212ENST00000430570 CENPFP49454 3210 aa28.92■■■□□ 2.22
CPNE1-212ENST00000430570 SMCO2A6NFE2 343 aa28.92■■■□□ 2.22
CPNE1-212ENST00000430570 JAK2O60674 1132 aa28.92■■■□□ 2.22
CPNE1-212ENST00000430570 FDPSP14324 419 aaKnown RBP28.92■■■□□ 2.22
CPNE1-212ENST00000430570 UBE2SQ16763 222 aa28.92■■■□□ 2.22
CPNE1-212ENST00000430570 PPP1R18Q6NYC8 613 aa28.92■■■□□ 2.22
CPNE1-212ENST00000430570 MORC4Q8TE76 937 aa28.92■■■□□ 2.22
CPNE1-212ENST00000430570 RMDN3Q96TC7 470 aa28.92■■■□□ 2.22
CPNE1-212ENST00000430570 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.92■■■□□ 2.226e-9■□□□□ 10.4
CPNE1-212ENST00000430570 SH2B1Q9NRF2 756 aaPredicted RBP28.92■■■□□ 2.22
CPNE1-212ENST00000430570 VPS54Q9P1Q0 977 aa28.92■■■□□ 2.22
CPNE1-212ENST00000430570 PIK3CDO00329 1044 aa28.91■■■□□ 2.22
CPNE1-212ENST00000430570 ADAMTS3O15072 1205 aa28.91■■■□□ 2.22
CPNE1-212ENST00000430570 ZNF865P0CJ78 1059 aaPredicted RBP28.91■■■□□ 2.22
CPNE1-212ENST00000430570 SMARCC2Q8TAQ2 1214 aa28.91■■■□□ 2.22
CPNE1-212ENST00000430570 KATNBL1Q9H079 304 aa28.91■■■□□ 2.22
CPNE1-212ENST00000430570 PXMP2Q9NR77 195 aa28.91■■■□□ 2.22
CPNE1-212ENST00000430570 STK36Q9NRP7 1315 aa28.9■■■□□ 2.22
CPNE1-212ENST00000430570 EDNRBP24530 442 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms