RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 A0A1W2PQY0 241 aa14.86□□□□□ -0.03
GPC1-204ENST00000426280 ASB14A6NK59 587 aa14.86□□□□□ -0.03
GPC1-204ENST00000426280 SH2B2O14492 632 aaPredicted RBP14.86□□□□□ -0.03
GPC1-204ENST00000426280 DHX16O60231 1041 aaKnown RBP14.86□□□□□ -0.03
GPC1-204ENST00000426280 RXRAP19793 462 aa14.86□□□□□ -0.03
GPC1-204ENST00000426280 ACLYP53396 1101 aa14.86□□□□□ -0.03
GPC1-204ENST00000426280 GJA9P57773 515 aa14.86□□□□□ -0.03
GPC1-204ENST00000426280 MDM2Q00987 491 aaPredicted RBP14.86□□□□□ -0.03
GPC1-204ENST00000426280 TNFAIP2Q03169 654 aa14.86□□□□□ -0.03
GPC1-204ENST00000426280 SNX17Q15036 470 aa14.86□□□□□ -0.03
GPC1-204ENST00000426280 FBXO11Q86XK2 927 aa14.86□□□□□ -0.03
GPC1-204ENST00000426280 SYTL5Q8TDW5 730 aaPredicted RBP14.86□□□□□ -0.03
GPC1-204ENST00000426280 TCEANC2Q96MN5 208 aa14.86□□□□□ -0.03
GPC1-204ENST00000426280 RIOX1Q9H6W3 641 aa14.86□□□□□ -0.03
GPC1-204ENST00000426280 TRIM43BA6NCK2 446 aa14.85□□□□□ -0.03
GPC1-204ENST00000426280 SOX1O00570 391 aaPredicted RBP14.85□□□□□ -0.03
GPC1-204ENST00000426280 DYNC1LI2O43237 492 aaPredicted RBP14.85□□□□□ -0.03
GPC1-204ENST00000426280 CDC45O75419 566 aa14.85□□□□□ -0.03
GPC1-204ENST00000426280 SLC34A2O95436 690 aa14.85□□□□□ -0.03
GPC1-204ENST00000426280 C6orf222P0C671 652 aaPredicted RBP14.85□□□□□ -0.03
GPC1-204ENST00000426280 TLE2Q04725 743 aa14.85□□□□□ -0.03
GPC1-204ENST00000426280 RNF180Q86T96 592 aa14.85□□□□□ -0.03
GPC1-204ENST00000426280 CMTR1Q8N1G2 835 aaKnown RBP14.85□□□□□ -0.03
GPC1-204ENST00000426280 PIBF1Q8WXW3 757 aa14.85□□□□□ -0.03
GPC1-204ENST00000426280 COPS5Q92905 334 aa14.85□□□□□ -0.03
GPC1-204ENST00000426280 TRIM43Q96BQ3 446 aaPredicted RBP14.85□□□□□ -0.03
GPC1-204ENST00000426280 RBAK-RBAKDNI3L0D1 243 aa14.84□□□□□ -0.03
GPC1-204ENST00000426280 PLEKHA8P1O95397 391 aa14.84□□□□□ -0.03
GPC1-204ENST00000426280 ASGR1P07306 291 aa14.84□□□□□ -0.03
GPC1-204ENST00000426280 CPA1P15085 419 aa14.84□□□□□ -0.03
GPC1-204ENST00000426280 EDNRBP24530 442 aa14.84□□□□□ -0.03
GPC1-204ENST00000426280 NKX3-2P78367 333 aa14.84□□□□□ -0.03
GPC1-204ENST00000426280 EXOSC10Q01780 885 aaKnown RBP14.84□□□□□ -0.03
GPC1-204ENST00000426280 HOMER1Q86YM7 354 aa14.84□□□□□ -0.03
GPC1-204ENST00000426280 ZNF654Q8IZM8 581 aa14.84□□□□□ -0.03
GPC1-204ENST00000426280 RGS22Q8NE09 1264 aa14.84□□□□□ -0.03
GPC1-204ENST00000426280 NUP133Q8WUM0 1156 aa14.84□□□□□ -0.03
GPC1-204ENST00000426280 ZFP91Q96JP5 570 aaPredicted RBP14.84□□□□□ -0.03
GPC1-204ENST00000426280 ABCB11O95342 1321 aa14.84□□□□□ -0.03
GPC1-204ENST00000426280 DNAH12Q6ZR08 3092 aa14.83□□□□□ -0.04
GPC1-204ENST00000426280 RBM47A0AV96 593 aaKnown RBP14.83□□□□□ -0.04
GPC1-204ENST00000426280 ZBTB5O15062 677 aa14.83□□□□□ -0.04
GPC1-204ENST00000426280 ARIH2O95376 493 aa14.83□□□□□ -0.04
GPC1-204ENST00000426280 CST5P28325 142 aaPredicted RBP14.83□□□□□ -0.04
GPC1-204ENST00000426280 GNASQ5JWF2 1037 aa14.83□□□□□ -0.04
GPC1-204ENST00000426280 IQSEC1Q6DN90 963 aa14.83□□□□□ -0.04
GPC1-204ENST00000426280 NOL8Q76FK4 1167 aaKnown RBP14.83□□□□□ -0.04
GPC1-204ENST00000426280 PPP1R13LQ8WUF5 828 aa14.83□□□□□ -0.04
GPC1-204ENST00000426280 TSEN34Q9BSV6 310 aaKnown RBP14.83□□□□□ -0.04
GPC1-204ENST00000426280 PDLIM7Q9NR12 457 aa14.83□□□□□ -0.04
GPC1-204ENST00000426280 GRIN2DO15399 1336 aa14.83□□□□□ -0.04
GPC1-204ENST00000426280 ERICH2A1L162 156 aa14.82□□□□□ -0.04
GPC1-204ENST00000426280 HOXA13P31271 388 aaPredicted RBP14.82□□□□□ -0.04
GPC1-204ENST00000426280 MCM5P33992 734 aa14.82□□□□□ -0.04
GPC1-204ENST00000426280 BMP8BP34820 402 aa14.82□□□□□ -0.04
GPC1-204ENST00000426280 CDK7P50613 346 aa14.82□□□□□ -0.04
GPC1-204ENST00000426280 C1orf53Q5VUE5 145 aa14.82□□□□□ -0.04
GPC1-204ENST00000426280 CXCL17Q6UXB2 119 aa14.82□□□□□ -0.04
GPC1-204ENST00000426280 TLK2Q86UE8 772 aa14.82□□□□□ -0.04
GPC1-204ENST00000426280 SRBD1Q8N5C6 995 aaKnown RBP14.82□□□□□ -0.04
GPC1-204ENST00000426280 NEK1Q96PY6 1258 aa14.82□□□□□ -0.04
GPC1-204ENST00000426280 AMNQ9BXJ7 453 aa14.82□□□□□ -0.04
GPC1-204ENST00000426280 VTA1Q9NP79 307 aa14.82□□□□□ -0.04
GPC1-204ENST00000426280 ADD3Q9UEY8 706 aaKnown RBP14.82□□□□□ -0.04
GPC1-204ENST00000426280 BRPF3Q9ULD4 1205 aa14.82□□□□□ -0.04
GPC1-204ENST00000426280 hCG_1642624A0A1W2PR95 340 aa14.81□□□□□ -0.04
GPC1-204ENST00000426280 CFBP00751 764 aa14.81□□□□□ -0.04
GPC1-204ENST00000426280 HSD17B4P51659 736 aa14.81□□□□□ -0.04
GPC1-204ENST00000426280 PSMC6P62333 389 aa14.81□□□□□ -0.04
GPC1-204ENST00000426280 FAAP100Q0VG06 881 aa14.81□□□□□ -0.04
GPC1-204ENST00000426280 DUSP28Q4G0W2 176 aa14.81□□□□□ -0.04
GPC1-204ENST00000426280 CATIPQ7Z7H3 387 aa14.81□□□□□ -0.04
GPC1-204ENST00000426280 WDR11Q9BZH6 1224 aa14.81□□□□□ -0.04
GPC1-204ENST00000426280 STARD7Q9NQZ5 370 aa14.81□□□□□ -0.04
GPC1-204ENST00000426280 MRPL11Q9Y3B7 192 aaKnown RBP14.81□□□□□ -0.04
GPC1-204ENST00000426280 PCDHA1Q9Y5I3 950 aa14.81□□□□□ -0.04
GPC1-204ENST00000426280 CEP290O15078 2479 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 PQBP1O60828 265 aaKnown RBP14.8□□□□□ -0.04
GPC1-204ENST00000426280 LIFRP42702 1097 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 EPHB4P54760 987 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 PDE4DQ08499 809 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 SART3Q15020 963 aaKnown RBP14.8□□□□□ -0.04
GPC1-204ENST00000426280 FSCN1Q16658 493 aaKnown RBP14.8□□□□□ -0.04
GPC1-204ENST00000426280 TSGA10IPQ3SY00 556 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 CCDC62Q6P9F0 684 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 CASC1Q6TDU7 716 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 CCDC82Q8N4S0 544 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 DNERQ8NFT8 737 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 IL31RAQ8NI17 732 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 BADQ92934 168 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 KCNB2Q92953 911 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 LRCH3Q96II8 777 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 TMEM87BQ96K49 555 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 PRDM5Q9NQX1 630 aaPredicted RBP14.8□□□□□ -0.04
GPC1-204ENST00000426280 PNMA2Q9UL42 364 aa14.8□□□□□ -0.04
GPC1-204ENST00000426280 PNMA6FA0A0J9YX94 578 aa14.79□□□□□ -0.04
GPC1-204ENST00000426280 MOXD2PA6NHM9 499 aa14.79□□□□□ -0.04
GPC1-204ENST00000426280 RGS20O76081 388 aa14.79□□□□□ -0.04
GPC1-204ENST00000426280 DDAH1O94760 285 aa14.79□□□□□ -0.04
GPC1-204ENST00000426280 EIF2AK2P19525 551 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms