RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 RNF207Q6ZRF8 634 aa24.83■■□□□ 1.57
CPNE1-211ENST00000420363 MORC4Q8TE76 937 aa24.83■■□□□ 1.57
CPNE1-211ENST00000420363 NUP133Q8WUM0 1156 aa24.83■■□□□ 1.57
CPNE1-211ENST00000420363 LZTS2Q9BRK4 669 aa24.83■■□□□ 1.57
CPNE1-211ENST00000420363 AMNQ9BXJ7 453 aa24.83■■□□□ 1.57
CPNE1-211ENST00000420363 MRPL11Q9Y3B7 192 aaKnown RBP24.83■■□□□ 1.57
CPNE1-211ENST00000420363 RARBP10826 455 aa24.82■■□□□ 1.56
CPNE1-211ENST00000420363 SMARCA1P28370 1054 aa24.82■■□□□ 1.56
CPNE1-211ENST00000420363 GNAQP50148 359 aa24.82■■□□□ 1.56
CPNE1-211ENST00000420363 ACVR2BQ13705 512 aa24.82■■□□□ 1.56
CPNE1-211ENST00000420363 SLC35G1Q2M3R5 365 aa24.82■■□□□ 1.56
CPNE1-211ENST00000420363 SLC30A10Q6XR72 485 aa24.82■■□□□ 1.56
CPNE1-211ENST00000420363 MCF2L2Q86YR7 1114 aa24.82■■□□□ 1.56
CPNE1-211ENST00000420363 SPZ1Q9BXG8 430 aa24.82■■□□□ 1.56
CPNE1-211ENST00000420363 KATNBL1Q9H079 304 aa24.82■■□□□ 1.56
CPNE1-211ENST00000420363 PRKAG2Q9UGJ0 569 aa24.82■■□□□ 1.56
CPNE1-211ENST00000420363 ZHX1Q9UKY1 873 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-211ENST00000420363 SLC12A7Q9Y666 1083 aa24.82■■□□□ 1.56
CPNE1-211ENST00000420363 KBTBD13C9JR72 458 aa24.81■■□□□ 1.56
CPNE1-211ENST00000420363 CYTH3O43739 400 aa24.81■■□□□ 1.56
CPNE1-211ENST00000420363 MYCNP04198 464 aaPredicted RBP24.81■■□□□ 1.56
CPNE1-211ENST00000420363 RPS6P62753 249 aaKnown RBP24.81■■□□□ 1.56
CPNE1-211ENST00000420363 ANO1Q5XXA6 986 aa24.81■■□□□ 1.56
CPNE1-211ENST00000420363 DNERQ8NFT8 737 aa24.81■■□□□ 1.56
CPNE1-211ENST00000420363 MYL10Q9BUA6 226 aa24.81■■□□□ 1.56
CPNE1-211ENST00000420363 LRRC2Q9BYS8 371 aa24.81■■□□□ 1.56
CPNE1-211ENST00000420363 VAT1LQ9HCJ6 419 aa24.81■■□□□ 1.56
CPNE1-211ENST00000420363 FAM184BQ9ULE4 1060 aa24.81■■□□□ 1.56
CPNE1-211ENST00000420363 SNX14Q9Y5W7 946 aa24.81■■□□□ 1.56
CPNE1-211ENST00000420363 ALDH5A1P51649 535 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-211ENST00000420363 GHRHRQ02643 423 aa24.8■■□□□ 1.56
CPNE1-211ENST00000420363 Q7L0L9 218 aa24.8■■□□□ 1.56
CPNE1-211ENST00000420363 DNAH12Q6ZR08 3092 aa24.8■■□□□ 1.56
CPNE1-211ENST00000420363 BAZ2BQ9UIF8 2168 aaKnown RBP24.79■■□□□ 1.56
CPNE1-211ENST00000420363 RCAN1P53805 252 aa24.79■■□□□ 1.56
CPNE1-211ENST00000420363 RTP1P59025 263 aa24.79■■□□□ 1.56
CPNE1-211ENST00000420363 SAMD3Q8N6K7 520 aa24.79■■□□□ 1.56
CPNE1-211ENST00000420363 MPHOSPH6Q99547 160 aaKnown RBP24.79■■□□□ 1.56
CPNE1-211ENST00000420363 XPNPEP3Q9NQH7 507 aa24.79■■□□□ 1.56
CPNE1-211ENST00000420363 PNMA6FA0A0J9YX94 578 aa24.78■■□□□ 1.56
CPNE1-211ENST00000420363 PPP1R11O60927 126 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-211ENST00000420363 CALML3P27482 149 aa24.78■■□□□ 1.56
CPNE1-211ENST00000420363 APOA5Q6Q788 366 aa24.78■■□□□ 1.56
CPNE1-211ENST00000420363 HOMER1Q86YM7 354 aa24.78■■□□□ 1.56
CPNE1-211ENST00000420363 FBXL16Q8N461 479 aa24.78■■□□□ 1.56
CPNE1-211ENST00000420363 JAKMIP1Q96N16 626 aaKnown RBP24.78■■□□□ 1.56
CPNE1-211ENST00000420363 PIGSQ96S52 555 aa24.78■■□□□ 1.56
CPNE1-211ENST00000420363 VTA1Q9NP79 307 aa24.78■■□□□ 1.56
CPNE1-211ENST00000420363 ATP11BQ9Y2G3 1177 aa24.78■■□□□ 1.56
CPNE1-211ENST00000420363 DUSP11O75319 330 aaKnown RBP24.77■■□□□ 1.56
CPNE1-211ENST00000420363 EDNRBP24530 442 aa24.77■■□□□ 1.56
CPNE1-211ENST00000420363 PSMA5P28066 241 aa24.77■■□□□ 1.56
CPNE1-211ENST00000420363 BLOC1S2Q6QNY1 142 aa24.77■■□□□ 1.56
CPNE1-211ENST00000420363 SLC39A5Q6ZMH5 540 aa24.77■■□□□ 1.56
CPNE1-211ENST00000420363 SYNE3Q6ZMZ3 975 aa24.77■■□□□ 1.56
CPNE1-211ENST00000420363 MICU3Q86XE3 530 aa24.77■■□□□ 1.56
CPNE1-211ENST00000420363 USP26Q9BXU7 913 aa24.77■■□□□ 1.56
CPNE1-211ENST00000420363 MAP3K20Q9NYL2 800 aaKnown RBP24.77■■□□□ 1.56
CPNE1-211ENST00000420363 PCDHA1Q9Y5I3 950 aa24.77■■□□□ 1.56
CPNE1-211ENST00000420363 B4DLN1 442 aa24.76■■□□□ 1.55
CPNE1-211ENST00000420363 EIF5BO60841 1220 aaKnown RBP24.76■■□□□ 1.55
CPNE1-211ENST00000420363 MRPL12P52815 198 aaKnown RBP24.76■■□□□ 1.55
CPNE1-211ENST00000420363 LRRC41Q15345 812 aa24.76■■□□□ 1.55
CPNE1-211ENST00000420363 CCDC144BQ3MJ40 725 aa24.76■■□□□ 1.55
CPNE1-211ENST00000420363 TCEANC2Q96MN5 208 aa24.76■■□□□ 1.55
CPNE1-211ENST00000420363 PURBQ96QR8 312 aaKnown RBP24.76■■□□□ 1.55
CPNE1-211ENST00000420363 COL6A3P12111 3177 aa24.76■■□□□ 1.55
CPNE1-211ENST00000420363 OPLAHO14841 1288 aa24.75■■□□□ 1.55
CPNE1-211ENST00000420363 ADAMTS4O75173 837 aa24.75■■□□□ 1.55
CPNE1-211ENST00000420363 HSD17B4P51659 736 aa24.75■■□□□ 1.55
CPNE1-211ENST00000420363 TMTC3Q6ZXV5 915 aa24.75■■□□□ 1.55
CPNE1-211ENST00000420363 RNF180Q86T96 592 aa24.75■■□□□ 1.55
CPNE1-211ENST00000420363 FANCBQ8NB91 859 aa24.75■■□□□ 1.55
CPNE1-211ENST00000420363 SYTL5Q8TDW5 730 aaPredicted RBP24.75■■□□□ 1.55
CPNE1-211ENST00000420363 RRP36Q96EU6 259 aaKnown RBP24.75■■□□□ 1.55
CPNE1-211ENST00000420363 RBM28Q9NW13 759 aaKnown RBP24.75■■□□□ 1.55
CPNE1-211ENST00000420363 MTMR10Q9NXD2 777 aa24.75■■□□□ 1.55
CPNE1-211ENST00000420363 SYNRGQ9UMZ2 1314 aa24.75■■□□□ 1.55
CPNE1-211ENST00000420363 PLEKHA8P1O95397 391 aa24.74■■□□□ 1.55
CPNE1-211ENST00000420363 CST5P28325 142 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-211ENST00000420363 ADCYAP1R1P41586 468 aa24.74■■□□□ 1.55
CPNE1-211ENST00000420363 LENG1Q96BZ8 264 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-211ENST00000420363 AGXT2Q9BYV1 514 aa24.74■■□□□ 1.55
CPNE1-211ENST00000420363 UPF3AQ9H1J1 476 aaKnown RBP24.74■■□□□ 1.55
CPNE1-211ENST00000420363 SEC63Q9UGP8 760 aaKnown RBP24.74■■□□□ 1.55
CPNE1-211ENST00000420363 NID2Q14112 1375 aa24.74■■□□□ 1.55
CPNE1-211ENST00000420363 ZBTB43O43298 467 aa24.73■■□□□ 1.55
CPNE1-211ENST00000420363 ADCY6O43306 1168 aa24.73■■□□□ 1.55
CPNE1-211ENST00000420363 RXRAP19793 462 aa24.73■■□□□ 1.55
CPNE1-211ENST00000420363 RPS6KB1P23443 525 aa24.73■■□□□ 1.55
CPNE1-211ENST00000420363 NKX3-2P78367 333 aa24.73■■□□□ 1.55
CPNE1-211ENST00000420363 FBXO16Q8IX29 292 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-211ENST00000420363 SRBD1Q8N5C6 995 aaKnown RBP24.73■■□□□ 1.55
CPNE1-211ENST00000420363 FERMT2Q96AC1 680 aa24.73■■□□□ 1.55
CPNE1-211ENST00000420363 PRDM5Q9NQX1 630 aaPredicted RBP24.73■■□□□ 1.55
CPNE1-211ENST00000420363 PHF24Q9UPV7 400 aa24.73■■□□□ 1.55
CPNE1-211ENST00000420363 STXBP5LQ9Y2K9 1186 aa24.73■■□□□ 1.55
CPNE1-211ENST00000420363 DLL1O00548 723 aa24.72■■□□□ 1.55
CPNE1-211ENST00000420363 PGK1P00558 417 aa24.72■■□□□ 1.55
CPNE1-211ENST00000420363 FGD1P98174 961 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms