RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ZNF605Q86T29 641 aa6.95□□□□□ -1.3
HMGB1P49-201ENST00000418882 OSBP2Q969R2 916 aa6.95□□□□□ -1.3
HMGB1P49-201ENST00000418882 MMP19Q99542 508 aa6.95□□□□□ -1.3
HMGB1P49-201ENST00000418882 MTA3Q9BTC8 594 aa6.95□□□□□ -1.3
HMGB1P49-201ENST00000418882 SPATA9Q9BWV2 254 aa6.95□□□□□ -1.3
HMGB1P49-201ENST00000418882 DCP1AQ9NPI6 582 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P49-201ENST00000418882 PLA2G2DQ9UNK4 145 aa6.95□□□□□ -1.3
HMGB1P49-201ENST00000418882 HCFC2Q9Y5Z7 792 aa6.95□□□□□ -1.3
HMGB1P49-201ENST00000418882 BLACEA4D250 179 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 PRODHO43272 600 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 KRT1P04264 644 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 NTRK3Q16288 839 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 PPIL6Q8IXY8 311 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 NLGN2Q8NFZ4 835 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 AARSD1Q9BTE6 412 aaKnown RBP6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 LNPKQ9C0E8 428 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 MCOLN1Q9GZU1 580 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 OSBPL2Q9H1P3 480 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 EPB41L4BQ9H329 900 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 ZNF552Q9H707 407 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 RXFP1Q9HBX9 757 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 PDLIM7Q9NR12 457 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 FAM53CQ9NYF3 392 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 KLHL14Q9P2G3 628 aa6.94□□□□□ -1.3
HMGB1P49-201ENST00000418882 NUDT19A8MXV4 375 aa6.93□□□□□ -1.3
HMGB1P49-201ENST00000418882 AGRPO00253 132 aa6.93□□□□□ -1.3
HMGB1P49-201ENST00000418882 FAM153BP0C7A2 387 aa6.93□□□□□ -1.3
HMGB1P49-201ENST00000418882 CORO7P57737 925 aa6.93□□□□□ -1.3
HMGB1P49-201ENST00000418882 SSRP1Q08945 709 aaKnown RBP6.93□□□□□ -1.3
HMGB1P49-201ENST00000418882 HSP90AA2PQ14568 343 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P49-201ENST00000418882 TESK1Q15569 626 aa6.93□□□□□ -1.3
HMGB1P49-201ENST00000418882 NLRP10Q86W26 655 aa6.93□□□□□ -1.3
HMGB1P49-201ENST00000418882 ZNF669Q96BR6 464 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P49-201ENST00000418882 SRPK1Q96SB4 655 aaKnown RBP6.93□□□□□ -1.3
HMGB1P49-201ENST00000418882 DNAJC7Q99615 494 aa6.93□□□□□ -1.3
HMGB1P49-201ENST00000418882 KRTAP9-2Q9BYQ4 174 aa6.93□□□□□ -1.3
HMGB1P49-201ENST00000418882 IQCA1LA6NCM1 817 aa6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 OR14I1A6ND48 311 aa6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 DBHP09172 617 aa6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 GLI4P10075 376 aa6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 FGFR1P11362 822 aa6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 PABPC1P11940 636 aaKnown RBP6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 MAP4K2Q12851 820 aa6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 BMS1Q14692 1282 aaKnown RBP6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 ACBD5Q5T8D3 534 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 RPTNQ6XPR3 784 aa6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 LRRC47Q8N1G4 583 aaKnown RBP6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 RCBTB1Q8NDN9 531 aa6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 PLEKHO2Q8TD55 490 aa6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 UBXN4Q92575 508 aa6.92□□□□□ -1.3
HMGB1P49-201ENST00000418882 TRAV20A0A0B4J274 112 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 MEFVO15553 781 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 MSCO60682 206 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 CPP00450 1065 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 FPR2P25090 351 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 VIPR1P32241 457 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 YBX1P67809 324 aaKnown RBP6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 ZNF124Q15973 351 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 FAM209AQ5JX71 171 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 E4F1Q66K89 784 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 BICRALQ6AI39 1079 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 TEX2Q8IWB9 1127 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 FBXO15Q8NCQ5 510 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 DIO2Q92813 273 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 MKL1Q969V6 931 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 EXOC2Q96KP1 924 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 CCDC140Q96MF4 163 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 KRTAP4-12Q9BQ66 201 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 SGPP1Q9BX95 441 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 PIF1Q9H611 641 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 GCM1Q9NP62 436 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 CDK11AQ9UQ88 783 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 NPFFR2Q9Y5X5 522 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 KDM2BQ8NHM5 1336 aa6.91□□□□□ -1.3
HMGB1P49-201ENST00000418882 TRBV23OR9-2A0A075B6M9 112 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 A0A1W2PQ27 194 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 A0A1W2PQ64 194 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 A0A1W2PQC6 194 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 A0A1W2PQD8 194 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 SRGAP3O43295 1099 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 NPHS1O60500 1241 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 FARP2O94887 1054 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 ARL4AP40617 200 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 RAB3GAP1Q15042 981 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 CCDC144BQ3MJ40 725 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 PLEKHN1Q494U1 663 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 KCNT2Q6UVM3 1135 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 NSMFQ6X4W1 530 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 SYDE1Q6ZW31 735 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 LRP10Q7Z4F1 713 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 LILRB2Q8N423 598 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 LZTR1Q8N653 840 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 ZBTB38Q8NAP3 1195 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 KCTD13Q8WZ19 329 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 BTG4Q9NY30 223 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 MARCH2Q9P0N8 246 aa6.9□□□□□ -1.3
HMGB1P49-201ENST00000418882 ASXL2Q76L83 1435 aa6.9□□□□□ -1.31
HMGB1P49-201ENST00000418882 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms