RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 TOM1L1O75674 476 aa20.14■□□□□ 0.82
SHANK3-202ENST00000414786 DDAH1O94760 285 aa20.14■□□□□ 0.82
SHANK3-202ENST00000414786 FAM186BQ8IYM0 893 aa20.14■□□□□ 0.82
SHANK3-202ENST00000414786 PPHLN1Q8NEY8 458 aaKnown RBP20.14■□□□□ 0.82
SHANK3-202ENST00000414786 JAK2O60674 1132 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 HSPH1Q92598 858 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 SLC12A6Q9UHW9 1150 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.14■□□□□ 0.817e-7■■■□□ 16.5
SHANK3-202ENST00000414786 EVI5O60447 810 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 PEX19P40855 299 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 TBK1Q9UHD2 729 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 SNAPC4Q5SXM2 1469 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 TNFAIP1Q13829 316 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 ZC3H12BQ5HYM0 836 aaKnown RBP20.14■□□□□ 0.81
SHANK3-202ENST00000414786 LZICQ8WZA0 190 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 P3H4Q92791 437 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 RIPOR2Q9Y4F9 1068 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 CEP85Q6P2H3 762 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 WDR97A6NE52 1622 aa20.14■□□□□ 0.81
SHANK3-202ENST00000414786 RNF139Q8WU17 664 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 DSTYKQ6XUX3 929 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 NLRP4Q96MN2 994 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 HNRNPDLO14979 420 aaKnown RBP20.13■□□□□ 0.81
SHANK3-202ENST00000414786 POLR2BP30876 1174 aaKnown RBP20.13■□□□□ 0.81
SHANK3-202ENST00000414786 SPOPLQ6IQ16 392 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 ANKRD44Q8N8A2 993 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 BTN2A2Q8WVV5 523 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 PI4K2BG5E9Z4 385 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 CLIC2O15247 247 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 ICA1Q05084 483 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 MTERF2Q49AM1 385 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 NRBP2Q9NSY0 501 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 NCF2P19878 526 aaPredicted RBP20.13■□□□□ 0.81
SHANK3-202ENST00000414786 BTDP43251 543 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 ANKRD13CQ8N6S4 541 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 DCAF15Q66K64 600 aa20.13■□□□□ 0.81
SHANK3-202ENST00000414786 RAD50Q92878 1312 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 ADGRL1O94910 1474 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.12■□□□□ 0.81
SHANK3-202ENST00000414786 GTPBP10A4D1E9 387 aaKnown RBP20.12■□□□□ 0.81
SHANK3-202ENST00000414786 RNF40O75150 1001 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 DAB2P98082 770 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 ARHGEF6Q15052 776 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 TRIM67Q6ZTA4 783 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 EYA2O00167 538 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 INHBAP08476 426 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 FBXL13Q8NEE6 735 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 PHACTR3Q96KR7 559 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 STX1BP61266 288 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 SCN4BQ8IWT1 228 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 CEP19Q96LK0 163 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 CALN1Q9BXU9 219 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 NFE2L3Q9Y4A8 694 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 SART1O43290 800 aaKnown RBP20.12■□□□□ 0.81
SHANK3-202ENST00000414786 OTUD7AQ8TE49 926 aaPredicted RBP20.12■□□□□ 0.81
SHANK3-202ENST00000414786 LGR6Q9HBX8 967 aa20.12■□□□□ 0.81
SHANK3-202ENST00000414786 CLTAP09496 248 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 CACNB2Q08289 660 aaPredicted RBP20.11■□□□□ 0.81
SHANK3-202ENST00000414786 ZKSCAN8Q15776 578 aaPredicted RBP20.11■□□□□ 0.81
SHANK3-202ENST00000414786 TEX2Q8IWB9 1127 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 SMAD5Q99717 465 aaKnown RBP20.11■□□□□ 0.81
SHANK3-202ENST00000414786 DNAJC17Q9NVM6 304 aaKnown RBP20.11■□□□□ 0.81
SHANK3-202ENST00000414786 MRPL11Q9Y3B7 192 aaKnown RBP20.11■□□□□ 0.81
SHANK3-202ENST00000414786 GRIN2BQ13224 1484 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 SERPIND1P05546 499 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 NFKBIL1Q9UBC1 381 aaPredicted RBP20.11■□□□□ 0.81
SHANK3-202ENST00000414786 PAK2Q13177 524 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 RUFY4Q6ZNE9 571 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 TEKT2Q9UIF3 430 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 RPSAP08865 295 aaKnown RBP20.11■□□□□ 0.81
SHANK3-202ENST00000414786 MXD4Q14582 209 aaPredicted RBP20.11■□□□□ 0.81
SHANK3-202ENST00000414786 ZNF827Q17R98 1081 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 NCLNQ969V3 563 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 DAPK1P53355 1430 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 TNRQ92752 1358 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 ZSCAN9O15535 394 aaPredicted RBP20.11■□□□□ 0.81
SHANK3-202ENST00000414786 CHMLP26374 656 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 KIF19Q2TAC6 998 aa20.11■□□□□ 0.81
SHANK3-202ENST00000414786 THOC1Q96FV9 657 aaKnown RBP20.11■□□□□ 0.81
SHANK3-202ENST00000414786 PPARAQ07869 468 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 CYP4F22Q6NT55 531 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 BASP1P80723 227 aaKnown RBP20.1■□□□□ 0.81
SHANK3-202ENST00000414786 FRA10AC1Q70Z53 315 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 TRAIPQ9BWF2 469 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 MAP3K5Q99683 1374 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 CPP00450 1065 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 LIG3P49916 1009 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 PDCD2Q16342 344 aaPredicted RBP20.1■□□□□ 0.81
SHANK3-202ENST00000414786 ABCB5Q2M3G0 1257 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 KCTD6Q8NC69 237 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 TEKT4Q8WW24 435 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 EYA1Q99502 592 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 NUP58Q9BVL2 599 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 LRRC4Q9HBW1 653 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 WDR64B1ANS9 1081 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 ABTB1Q969K4 478 aaPredicted RBP20.1■□□□□ 0.81
SHANK3-202ENST00000414786 DARS2Q6PI48 645 aaKnown RBP20.1■□□□□ 0.81
SHANK3-202ENST00000414786 TMEM87BQ96K49 555 aa20.1■□□□□ 0.81
SHANK3-202ENST00000414786 HEXIM2Q96MH2 286 aaKnown RBP20.1■□□□□ 0.81
SHANK3-202ENST00000414786 A0A1B0GUA9 196 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms