RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 NUP88Q99567 741 aaPredicted RBP19.74■□□□□ 0.75
CROCCP2-202ENST00000412962 MMTAG2Q9BU76 263 aaKnown RBP19.74■□□□□ 0.75
CROCCP2-202ENST00000412962 KCND1Q9NSA2 647 aa19.74■□□□□ 0.75
CROCCP2-202ENST00000412962 MYH7BA7E2Y1 1941 aa19.74■□□□□ 0.75
CROCCP2-202ENST00000412962 TBX2Q13207 712 aaPredicted RBP19.73■□□□□ 0.75
CROCCP2-202ENST00000412962 RRP1BQ14684 758 aaKnown RBP19.73■□□□□ 0.75
CROCCP2-202ENST00000412962 KMT5BQ4FZB7 885 aa19.73■□□□□ 0.75
CROCCP2-202ENST00000412962 E4F1Q66K89 784 aaPredicted RBP19.73■□□□□ 0.75
CROCCP2-202ENST00000412962 MAGEF1Q9HAY2 307 aa19.73■□□□□ 0.75
CROCCP2-202ENST00000412962 RIOK3O14730 519 aaKnown RBP19.73■□□□□ 0.75
CROCCP2-202ENST00000412962 KLRC4O43908 158 aa19.73■□□□□ 0.75
CROCCP2-202ENST00000412962 PRCPP42785 496 aa19.73■□□□□ 0.75
CROCCP2-202ENST00000412962 GMCL1P1Q8NEA9 526 aa19.73■□□□□ 0.75
CROCCP2-202ENST00000412962 ZBTB12Q9Y330 459 aaPredicted RBP19.73■□□□□ 0.75
CROCCP2-202ENST00000412962 PCDHA1Q9Y5I3 950 aa19.73■□□□□ 0.75
CROCCP2-202ENST00000412962 NDUFB10O96000 172 aa19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 VIL1P09327 827 aaKnown RBP19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 KCNB1Q14721 858 aa19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 CCDC112Q8NEF3 446 aa19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 GTF2F1P35269 517 aaKnown RBP eCLIP19.72■□□□□ 0.758e-7■■□□□ 11.7
CROCCP2-202ENST00000412962 FXR2P51116 673 aaKnown RBP eCLIP19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 DLGAP5Q15398 846 aa19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 TMEM266Q2M3C6 531 aa19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 NYAP1Q6ZVC0 841 aa19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 CALML4Q96GE6 196 aa19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 GMLQ99445 158 aa19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 LRWD1Q9UFC0 647 aa19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 HDAC9Q9UKV0 1011 aa19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 KCNJ6P48051 423 aa19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 PPP4R3AQ6IN85 833 aa19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.72■□□□□ 0.75
CROCCP2-202ENST00000412962 USP17L15C9J2P7 530 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 USP17L13C9JLJ4 530 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 USP17L11C9JVI0 530 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 USP17L18D6R9N7 530 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 USP17L22D6RA61 530 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 USP17L17D6RBQ6 530 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 USP17L19D6RCP7 530 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 USP17L20D6RJB6 530 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 TEX33O43247 280 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 USP17L24Q0WX57 530 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 PTPN14Q15678 1187 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 USP17L6PQ6QN14 398 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 OGFOD1Q8N543 542 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 GMCL1Q96IK5 515 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 CTAGE1Q96RT6 745 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 TMX1Q9H3N1 280 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 ZNF70Q9UC06 446 aaPredicted RBP19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 ADD3Q9UEY8 706 aaKnown RBP19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 DDX25Q9UHL0 483 aaKnown RBP19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 IKQ13123 557 aaPredicted RBP19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 ADSSL1Q8N142 457 aa19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 HERC5Q9UII4 1024 aaKnown RBP19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 ATF5Q9Y2D1 282 aaPredicted RBP19.71■□□□□ 0.75
CROCCP2-202ENST00000412962 POTEMA6NI47 508 aa19.7■□□□□ 0.74
CROCCP2-202ENST00000412962 RHOBTB3O94955 611 aa19.7■□□□□ 0.74
CROCCP2-202ENST00000412962 SNAP25P60880 206 aa19.7■□□□□ 0.74
CROCCP2-202ENST00000412962 CEP135Q66GS9 1140 aa19.7■□□□□ 0.74
CROCCP2-202ENST00000412962 TRIM9Q9C026 710 aa19.7■□□□□ 0.74
CROCCP2-202ENST00000412962 ZNF592Q92610 1267 aa19.7■□□□□ 0.74
CROCCP2-202ENST00000412962 RAB34Q9BZG1 259 aa19.7■□□□□ 0.74
CROCCP2-202ENST00000412962 GLT8D2Q9H1C3 349 aa19.7■□□□□ 0.74
CROCCP2-202ENST00000412962 GRB10Q13322 594 aa19.69■□□□□ 0.74
CROCCP2-202ENST00000412962 FILIP1LQ4L180 1135 aa19.69■□□□□ 0.74
CROCCP2-202ENST00000412962 PPP1R13BQ96KQ4 1090 aa19.69■□□□□ 0.74
CROCCP2-202ENST00000412962 A0A1W2PRG0 241 aa19.69■□□□□ 0.74
CROCCP2-202ENST00000412962 PSDA5PKW4 1024 aaPredicted RBP19.69■□□□□ 0.74
CROCCP2-202ENST00000412962 ASIC1P78348 528 aa19.69■□□□□ 0.74
CROCCP2-202ENST00000412962 GIMAP8Q8ND71 665 aaPredicted RBP19.69■□□□□ 0.74
CROCCP2-202ENST00000412962 SLC16A10Q8TF71 515 aa19.69■□□□□ 0.74
CROCCP2-202ENST00000412962 CGNQ9P2M7 1197 aaKnown RBP19.69■□□□□ 0.74
CROCCP2-202ENST00000412962 TRIM49BA6NDI0 452 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 BMP3P12645 472 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 CCT6AP40227 531 aaKnown RBP19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 ADKP55263 362 aaKnown RBP19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 KRT31Q15323 416 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 SYDE2Q5VT97 1194 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 TC2NQ8N9U0 490 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 FAM151AQ8WW52 585 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 CDK5RAP3Q96JB5 506 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 C7orf25Q9BPX7 421 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 VEZTQ9HBM0 779 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 CNTNAP1P78357 1384 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 STIM1Q13586 685 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 PDIA5Q14554 519 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 SPDYE2Q495Y8 402 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 TMEM139Q8IV31 216 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 NIM1KQ8IY84 436 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 SPICE1Q8N0Z3 855 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 PNMA5Q96PV4 448 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 AMNQ9BXJ7 453 aa19.68■□□□□ 0.74
CROCCP2-202ENST00000412962 GCFC2P16383 781 aaKnown RBP19.67■□□□□ 0.74
CROCCP2-202ENST00000412962 AMPD3Q01432 767 aa19.67■□□□□ 0.74
CROCCP2-202ENST00000412962 SEMA3FQ13275 785 aa19.67■□□□□ 0.74
CROCCP2-202ENST00000412962 HAS1Q92839 578 aa19.67■□□□□ 0.74
CROCCP2-202ENST00000412962 GJA10Q969M2 543 aa19.67■□□□□ 0.74
CROCCP2-202ENST00000412962 ANO3Q9BYT9 981 aa19.67■□□□□ 0.74
CROCCP2-202ENST00000412962 EXOC1Q9NV70 894 aa19.67■□□□□ 0.74
CROCCP2-202ENST00000412962 LIMA1Q9UHB6 759 aaKnown RBP19.67■□□□□ 0.74
CROCCP2-202ENST00000412962 ZNRF3Q9ULT6 936 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms