RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 ZNF662Q6ZS27 426 aa17.77■□□□□ 0.44
HOXD3-202ENST00000410016 ZSCAN29Q8IWY8 852 aaPredicted RBP17.77■□□□□ 0.44
HOXD3-202ENST00000410016 GUCA1BQ9UMX6 200 aa17.77■□□□□ 0.44
HOXD3-202ENST00000410016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.76■□□□□ 0.43
HOXD3-202ENST00000410016 PSMD14O00487 310 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 KLK7P49862 253 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 AMPD3Q01432 767 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 TBC1D8BQ0IIM8 1120 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 RETREG2Q8NC44 543 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 TBC1D16Q8TBP0 767 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 CNOT6LQ96LI5 555 aaKnown RBP17.76■□□□□ 0.43
HOXD3-202ENST00000410016 SEMA6BQ9H3T3 888 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 BLOC1S4Q9NUP1 217 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 MTMR4Q9NYA4 1195 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 MYO6Q9UM54 1294 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 LY75O60449 1722 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 GABPAQ06546 454 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 GRB10Q13322 594 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 HPS3Q969F9 1004 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 CCDC47Q96A33 483 aaKnown RBP17.76■□□□□ 0.43
HOXD3-202ENST00000410016 NUP58Q9BVL2 599 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 ZCCHC17Q9NP64 241 aaKnown RBP17.76■□□□□ 0.43
HOXD3-202ENST00000410016 TFR2Q9UP52 801 aa17.76■□□□□ 0.43
HOXD3-202ENST00000410016 POTEB2H3BUK9 544 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 BBOX1O75936 387 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 GYS1P13807 737 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 ADRA2BP18089 450 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 PPP1R2P41236 205 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 TXKP42681 527 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 CENPPQ6IPU0 288 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 TRAPPC11Q7Z392 1133 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 SLF2Q8IX21 1173 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 TBC1D22AQ8WUA7 517 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 USP21Q9UK80 565 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 CTAGE15A4D2H0 777 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 CTAGE8P0CG41 777 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 SNHG28P0DPA3 235 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 TRIM21P19474 475 aaKnown RBP17.75■□□□□ 0.43
HOXD3-202ENST00000410016 CYP2C19P33261 490 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 FXR2P51116 673 aaKnown RBP eCLIP17.75■□□□□ 0.43
HOXD3-202ENST00000410016 TSR1Q2NL82 804 aaKnown RBP17.75■□□□□ 0.43
HOXD3-202ENST00000410016 CTAGE6Q86UF2 777 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 CTAGE4Q8IX94 777 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 RBM17Q96I25 401 aaKnown RBP17.75■□□□□ 0.43
HOXD3-202ENST00000410016 PNMA5Q96PV4 448 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 ERGIC2Q96RQ1 377 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 DAGLAQ9Y4D2 1042 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 THSD7AQ9UPZ6 1657 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 PLIN4Q96Q06 1357 aa17.75■□□□□ 0.43
HOXD3-202ENST00000410016 FRMPD2Q68DX3 1309 aaPredicted RBP17.74■□□□□ 0.43
HOXD3-202ENST00000410016 hCG_1984214I3L0E3 225 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 POLR3GO15318 223 aaPredicted RBP17.74■□□□□ 0.43
HOXD3-202ENST00000410016 SLC37A4O43826 429 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 SERPINB2P05120 415 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 ZBED6P86452 979 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 CNNM4Q6P4Q7 775 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 FAM114A1Q8IWE2 563 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 ZNF713Q8N859 430 aaPredicted RBP17.74■□□□□ 0.43
HOXD3-202ENST00000410016 COA7Q96BR5 231 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 CALML4Q96GE6 196 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 IGKV6D-41A0A0C4DH26 115 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 RCCD1A6NED2 376 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 MYMKA6NI61 221 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 OAS2P29728 719 aaKnown RBP17.74■□□□□ 0.43
HOXD3-202ENST00000410016 HOXA10P31260 410 aaPredicted RBP17.74■□□□□ 0.43
HOXD3-202ENST00000410016 FIGNQ5HY92 759 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 NCAPH2Q6IBW4 605 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 SV2BQ7L1I2 683 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 NOA1Q8NC60 698 aaKnown RBP17.74■□□□□ 0.43
HOXD3-202ENST00000410016 NOC4LQ9BVI4 516 aaKnown RBP17.74■□□□□ 0.43
HOXD3-202ENST00000410016 SLC39A2Q9NP94 309 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 LRWD1Q9UFC0 647 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 L1RE1Q9UN81 338 aa17.74■□□□□ 0.43
HOXD3-202ENST00000410016 KRT83P78385 493 aa17.73■□□□□ 0.43
HOXD3-202ENST00000410016 CALCRLQ16602 461 aa17.73■□□□□ 0.43
HOXD3-202ENST00000410016 CCDC122Q5T0U0 273 aa17.73■□□□□ 0.43
HOXD3-202ENST00000410016 LACRTQ9GZZ8 138 aa17.73■□□□□ 0.43
HOXD3-202ENST00000410016 NHEJ1Q9H9Q4 299 aaPredicted RBP17.73■□□□□ 0.43
HOXD3-202ENST00000410016 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.73■□□□□ 0.43
HOXD3-202ENST00000410016 MYH1P12882 1939 aa17.73■□□□□ 0.43
HOXD3-202ENST00000410016 PVALEFA0A1B0GWK0 134 aa17.73■□□□□ 0.43
HOXD3-202ENST00000410016 TDP2O95551 362 aa17.73■□□□□ 0.43
HOXD3-202ENST00000410016 MTIF2P46199 727 aaKnown RBP17.73■□□□□ 0.43
HOXD3-202ENST00000410016 PDIA5Q14554 519 aa17.73■□□□□ 0.43
HOXD3-202ENST00000410016 ASPRV1Q53RT3 343 aa17.73■□□□□ 0.43
HOXD3-202ENST00000410016 CCDC170Q8IYT3 715 aa17.73■□□□□ 0.43
HOXD3-202ENST00000410016 STK17AQ9UEE5 414 aa17.73■□□□□ 0.43
HOXD3-202ENST00000410016 A0A1W2PQJ5 194 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 EIF3CLB5ME19 914 aaKnown RBP17.72■□□□□ 0.43
HOXD3-202ENST00000410016 ENC1O14682 589 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 RHOXF2BP0C7M4 288 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 AKR1B1P15121 316 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 VSNL1P62760 191 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 ST5P78524 1137 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 CDK17Q00537 523 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 MCM6Q14566 821 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 PAPD7Q5XG87 772 aaKnown RBP17.72■□□□□ 0.43
HOXD3-202ENST00000410016 UNC13DQ70J99 1090 aa17.72■□□□□ 0.43
HOXD3-202ENST00000410016 LRRC47Q8N1G4 583 aaKnown RBP17.72■□□□□ 0.43
HOXD3-202ENST00000410016 EIF3CQ99613 913 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms