RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
SCAMP4-202ENST00000409472 KCNJ18B7U540 433 aa17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 NKRFO15226 690 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■□□□□ 8.4
SCAMP4-202ENST00000409472 FCER1AP12319 257 aa17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 EN1Q05925 392 aaPredicted RBP17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 GRB10Q13322 594 aa17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 KCNJ12Q14500 433 aa17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 RRP1BQ14684 758 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 CALCRLQ16602 461 aa17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 CASP14P31944 242 aa17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 COPB1P53618 953 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 TCP11X2Q5H9J9 407 aa17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 PNMA5Q96PV4 448 aa17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 RIC8AQ9NPQ8 531 aa17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 CALCOCO1Q9P1Z2 691 aa17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 LIMA1Q9UHB6 759 aaKnown RBP17.06■□□□□ 0.32
SCAMP4-202ENST00000409472 RHOBTB3O94955 611 aa17.05■□□□□ 0.32
SCAMP4-202ENST00000409472 CLK2P49760 499 aaKnown RBP17.05■□□□□ 0.32
SCAMP4-202ENST00000409472 STK4Q13043 487 aa17.05■□□□□ 0.32
SCAMP4-202ENST00000409472 CERKLQ49MI3 558 aaPredicted RBP17.05■□□□□ 0.32
SCAMP4-202ENST00000409472 RAD9BQ6WBX8 426 aa17.05■□□□□ 0.32
SCAMP4-202ENST00000409472 GIMAP8Q8ND71 665 aaPredicted RBP17.05■□□□□ 0.32
SCAMP4-202ENST00000409472 AK8Q96MA6 479 aa17.05■□□□□ 0.32
SCAMP4-202ENST00000409472 IDI2Q9BXS1 227 aa17.05■□□□□ 0.32
SCAMP4-202ENST00000409472 DNAI1Q9UI46 699 aa17.05■□□□□ 0.32
SCAMP4-202ENST00000409472 COL4A5P29400 1685 aa17.05■□□□□ 0.32
SCAMP4-202ENST00000409472 USP17L15C9J2P7 530 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 USP17L13C9JLJ4 530 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 AKR1B15C9JRZ8 316 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 USP17L11C9JVI0 530 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 USP17L18D6R9N7 530 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 USP17L22D6RA61 530 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 USP17L17D6RBQ6 530 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 USP17L19D6RCP7 530 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 USP17L20D6RJB6 530 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 hCG_1984214I3L0E3 225 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 N4BP3O15049 544 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 ZBTB5O15062 677 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 C21orf2O43822 256 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 FAM193AP78312 1265 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 USP17L24Q0WX57 530 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 KCNB1Q14721 858 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 QRICH1Q2TAL8 776 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 USP17L6PQ6QN14 398 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 KCNK18Q7Z418 384 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 ZNF713Q8N859 430 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 MTMR8Q96EF0 704 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 MRPL44Q9H9J2 332 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 BLOC1S4Q9NUP1 217 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 STX10O60499 249 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 MFAP3LO75121 409 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 RXRBP28702 533 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 ASIC1P78348 528 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 IRX3P78415 501 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 SLC15A2Q16348 729 aa17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 PRMT6Q96LA8 375 aaPredicted RBP17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 P2RX7Q99572 595 aaKnown RBP17.04■□□□□ 0.32
SCAMP4-202ENST00000409472 ETF1P62495 437 aaKnown RBP17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 ECM1Q16610 540 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 GPATCH4Q5T3I0 446 aaKnown RBP17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 PI4KBQ9UBF8 816 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 LRWD1Q9UFC0 647 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 RGPD3A6NKT7 1758 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 RGPD4Q7Z3J3 1758 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 SMCHD1A6NHR9 2005 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 SLC1A4P43007 532 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 PDE4DQ08499 809 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 MCM6Q14566 821 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 TTI2Q6NXR4 508 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 KIAA0895Q8NCT3 520 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 HAS1Q92839 578 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 CTAGE1Q96RT6 745 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 WDR24Q96S15 920 aa17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 DUSP9Q99956 384 aaKnown RBP17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 RGS17Q9UGC6 210 aaPredicted RBP17.03■□□□□ 0.32
SCAMP4-202ENST00000409472 ICA1Q05084 483 aa17.02■□□□□ 0.32
SCAMP4-202ENST00000409472 SLFN13Q68D06 897 aa17.02■□□□□ 0.32
SCAMP4-202ENST00000409472 TATDN1Q6P1N9 297 aa17.02■□□□□ 0.32
SCAMP4-202ENST00000409472 CUL5Q93034 780 aa17.02■□□□□ 0.32
SCAMP4-202ENST00000409472 IRX2Q9BZI1 471 aaPredicted RBP17.02■□□□□ 0.32
SCAMP4-202ENST00000409472 MYMKA6NI61 221 aa17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 LRRC10BA6NIK2 292 aa17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 PPIP5K2O43314 1243 aa17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 CDC37Q16543 378 aaPredicted RBP17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 PPFIBP1Q86W92 1011 aa17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 FCHSD1Q86WN1 690 aa17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 TRIM47Q96LD4 638 aa17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 CCDC17Q96LX7 622 aa17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 SRRTQ9BXP5 876 aaKnown RBP17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 DHX36Q9H2U1 1008 aaKnown RBP17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 L2HGDHQ9H9P8 463 aa17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 DDX41Q9UJV9 622 aaKnown RBP17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 SERPINA10Q9UK55 444 aa17.02■□□□□ 0.31
SCAMP4-202ENST00000409472 KIF2AO00139 706 aaPredicted RBP17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 FXR2P51116 673 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 FILIP1LQ4L180 1135 aa17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 PPP1R18Q6NYC8 613 aa17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 CDAN1Q8IWY9 1227 aa17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 GLIS3Q8NEA6 775 aa17.01■□□□□ 0.31
SCAMP4-202ENST00000409472 PANX2Q96RD6 677 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms