RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CALML3P27482 149 aa14.93□□□□□ -0.02
COL6A2-204ENST00000409416 USP8P40818 1118 aa14.93□□□□□ -0.02
COL6A2-204ENST00000409416 ATP2C1P98194 919 aaPredicted RBP14.93□□□□□ -0.02
COL6A2-204ENST00000409416 POLLQ9UGP5 575 aa14.93□□□□□ -0.02
COL6A2-204ENST00000409416 CNTNAP5Q8WYK1 1306 aa14.93□□□□□ -0.02
COL6A2-204ENST00000409416 H3BQF6 201 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 CYTH3O43739 400 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 CYP2C19P33261 490 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 CALCRLQ16602 461 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 NAA15Q9BXJ9 866 aaKnown RBP14.92□□□□□ -0.02
COL6A2-204ENST00000409416 ATP8A2Q9NTI2 1148 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 IL17AQ16552 155 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 PRR16Q569H4 304 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 RSRC2Q7L4I2 434 aaKnown RBP14.92□□□□□ -0.02
COL6A2-204ENST00000409416 C2CD5Q86YS7 1000 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 NOA1Q8NC60 698 aaKnown RBP14.92□□□□□ -0.02
COL6A2-204ENST00000409416 GLIS3Q8NEA6 775 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 SAMM50Q9Y512 469 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 AFF2P51816 1311 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 TTC26A0AVF1 554 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 VSNL1P62760 191 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 SPAG1Q07617 926 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 GRAPQ13588 217 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 CDKAL1Q5VV42 579 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 ZFPM1Q8IX07 1006 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 GRAPLQ8TC17 118 aaPredicted RBP14.92□□□□□ -0.02
COL6A2-204ENST00000409416 MTRQ99707 1265 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 FUT8Q9BYC5 575 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 TDRD3Q9H7E2 651 aaKnown RBP14.92□□□□□ -0.02
COL6A2-204ENST00000409416 RMND1Q9NWS8 449 aa14.92□□□□□ -0.02
COL6A2-204ENST00000409416 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.92□□□□□ -0.02
COL6A2-204ENST00000409416 EPN1Q9Y6I3 576 aaPredicted RBP14.92□□□□□ -0.02
COL6A2-204ENST00000409416 PARP4Q9UKK3 1724 aaKnown RBP14.91□□□□□ -0.02
COL6A2-204ENST00000409416 CAPN2P17655 700 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 C12orf60Q5U649 245 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 APTXQ7Z2E3 356 aaKnown RBP14.91□□□□□ -0.02
COL6A2-204ENST00000409416 FBXO33Q7Z6M2 555 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 CCDC148Q8NFR7 591 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 DCCP43146 1447 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 MYH2Q9UKX2 1941 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 RBAK-RBAKDNI3L0D1 243 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 FUT2Q10981 343 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 HERC4Q5GLZ8 1057 aaPredicted RBP14.91□□□□□ -0.02
COL6A2-204ENST00000409416 CDCA7Q9BWT1 371 aaPredicted RBP14.91□□□□□ -0.02
COL6A2-204ENST00000409416 MYO6Q9UM54 1294 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 PCDHA4Q9UN74 947 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 DUSP10Q9Y6W6 482 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 EIF3JO75822 258 aaKnown RBP14.91□□□□□ -0.02
COL6A2-204ENST00000409416 DDAH1O94760 285 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 IBSPP21815 317 aaPredicted RBP14.91□□□□□ -0.02
COL6A2-204ENST00000409416 GSTO1P78417 241 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 STK4Q13043 487 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 PABPC4Q13310 644 aaKnown RBP eCLIP14.91□□□□□ -0.02
COL6A2-204ENST00000409416 PPP2R5BQ15173 497 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 RRAGAQ7L523 313 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 RBM17Q96I25 401 aaKnown RBP14.91□□□□□ -0.02
COL6A2-204ENST00000409416 AGPAT5Q9NUQ2 364 aa14.91□□□□□ -0.02
COL6A2-204ENST00000409416 PFKFB3Q16875 520 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-204ENST00000409416 TMEM266Q2M3C6 531 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 ZNF658Q5TYW1 1059 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-204ENST00000409416 TTC19Q6DKK2 380 aaPredicted RBP14.9□□□□□ -0.02
COL6A2-204ENST00000409416 HDXQ7Z353 690 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 KSR1Q8IVT5 923 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 GOLGA6L1Q8N7Z2 621 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 CCDC43Q96MW1 224 aaKnown RBP14.9□□□□□ -0.02
COL6A2-204ENST00000409416 ANKZF1Q9H8Y5 726 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 FAM53CQ9NYF3 392 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 RWDD2AQ9UIY3 292 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 ADAM21Q9UKJ8 722 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 FAN1Q9Y2M0 1017 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 CCDC151A5D8V7 595 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 RASA1P20936 1047 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 NOP2P46087 812 aaKnown RBP14.9□□□□□ -0.02
COL6A2-204ENST00000409416 RAPGEF1Q13905 1077 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 SF3B3Q15393 1217 aaKnown RBP14.9□□□□□ -0.02
COL6A2-204ENST00000409416 CCDC181Q5TID7 509 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 KRT79Q5XKE5 535 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 ADAT2Q7Z6V5 191 aaKnown RBP14.9□□□□□ -0.02
COL6A2-204ENST00000409416 SPATA20Q8TB22 786 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 BRIP1Q9BX63 1249 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 TCEAL9Q9UHQ7 104 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 KIAA1024Q9UPX6 916 aa14.9□□□□□ -0.02
COL6A2-204ENST00000409416 E9PMD0 336 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 NKRFO15226 690 aaKnown RBP eCLIP14.89□□□□□ -0.03
COL6A2-204ENST00000409416 NDUFA10O95299 355 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 PLEKP08567 350 aaPredicted RBP14.89□□□□□ -0.03
COL6A2-204ENST00000409416 LEKR1Q6ZMV7 388 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 SH3RF1Q7Z6J0 888 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 TXLNBQ8N3L3 684 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 OR8K1Q8NGG5 319 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 ZNF287Q9HBT7 754 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 EHD2Q9NZN4 543 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 THRAP3Q9Y2W1 955 aaKnown RBP14.89□□□□□ -0.03
COL6A2-204ENST00000409416 ZBTB12Q9Y330 459 aaPredicted RBP14.89□□□□□ -0.03
COL6A2-204ENST00000409416 HLA-DOAP06340 250 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 OR52Z1P0C646 297 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 BRD3Q15059 726 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 ZSCAN26Q16670 478 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 RCSD1Q6JBY9 416 aa14.89□□□□□ -0.03
COL6A2-204ENST00000409416 PDXDC2PQ6P474 469 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms