RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 NUP58Q9BVL2 599 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 SAR1BQ9Y6B6 198 aa5.48□□□□□ -1.53
SMAD4-202ENST00000398417 NPHP3-ACAD11A0A0J9YXS1 232 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 POTEMA6NI47 508 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 DNM2P50570 870 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 RCAN1P53805 252 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 TMC4Q7Z404 712 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 POTEDQ86YR6 584 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 PROCA1Q8NCQ7 364 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-202ENST00000398417 NARFQ9UHQ1 456 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.47□□□□□ -1.53
SMAD4-202ENST00000398417 SPATA31A1Q5TZJ5 1347 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 LGALS16A8MUM7 142 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 ZNF185O15231 689 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 HLA-DOAP06340 250 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 CALCRLQ16602 461 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 MAP9Q49MG5 647 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 SBK1Q52WX2 424 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 CCDC174Q6PII3 467 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 EHBP1Q8NDI1 1231 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 SPAG5Q96R06 1193 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 CD209Q9NNX6 404 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 AGPAT5Q9NUQ2 364 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 NFAT5O94916 1531 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 STXBP3O00186 592 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 RASSF7Q02833 373 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 STK4Q13043 487 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 IQCEQ6IPM2 695 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 PDXDC2PQ6P474 469 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 KCTD1Q719H9 257 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 KRT26Q7Z3Y9 468 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 DYDC1Q8WWB3 177 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 HSF2BPO75031 334 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 ATP2C2O75185 946 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 STAT3P40763 770 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 HERVK_113P62684 666 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 ZYXQ15942 572 aaKnown RBP5.47□□□□□ -1.53
SMAD4-202ENST00000398417 AFAP1L1Q8TED9 768 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 KIFC2Q96AC6 838 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-202ENST00000398417 PCDHA13Q9Y5I0 950 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-202ENST00000398417 TMEM110-MUSTN1A8MSY1 372 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 CYP2C19P33261 490 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 KCNJ6P48051 423 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 NFIXQ14938 502 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 GPBP1Q86WP2 473 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 MYOCDQ8IZQ8 938 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 CCDC155Q8N6L0 562 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 TNFRSF25Q93038 417 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 DHTKD1Q96HY7 919 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-202ENST00000398417 DNAI2Q9GZS0 605 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 PANK4Q9NVE7 773 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 HYOU1Q9Y4L1 999 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 UBAP1LF5GYI3 381 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 SASH3O75995 380 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 PRKG1Q13976 671 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 USH1GQ495M9 461 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 DCAF17Q5H9S7 520 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-202ENST00000398417 FAM26FQ5R3K3 315 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 MFSD14BQ5SR56 506 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 CDKAL1Q5VV42 579 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 RAD54LQ92698 747 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 CEP104O60308 925 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 GDF11O95390 407 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 CACNB3P54284 484 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 GRB10Q13322 594 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 RNF187Q5TA31 235 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-202ENST00000398417 ELOA2Q8IYF1 753 aaPredicted RBP5.47□□□□□ -1.53
SMAD4-202ENST00000398417 CUL5Q93034 780 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 KANSL2Q9H9L4 492 aa5.47□□□□□ -1.53
SMAD4-202ENST00000398417 CXCR5P32302 372 aa5.46□□□□□ -1.53
SMAD4-202ENST00000398417 ZBED6P86452 979 aa5.46□□□□□ -1.53
SMAD4-202ENST00000398417 HLTFQ14527 1009 aaKnown RBP eCLIP5.46□□□□□ -1.53
SMAD4-202ENST00000398417 CASP8Q14790 479 aa5.46□□□□□ -1.53
SMAD4-202ENST00000398417 ZSCAN26Q16670 478 aa5.46□□□□□ -1.53
SMAD4-202ENST00000398417 FAM107BQ9H098 131 aa5.46□□□□□ -1.53
SMAD4-202ENST00000398417 LEMD3Q9Y2U8 911 aa5.46□□□□□ -1.53
SMAD4-202ENST00000398417 TBCAO75347 108 aaKnown RBP5.46□□□□□ -1.53
SMAD4-202ENST00000398417 SH3BGRP55822 239 aaPredicted RBP5.46□□□□□ -1.53
SMAD4-202ENST00000398417 KLHL30Q0D2K2 578 aa5.46□□□□□ -1.53
SMAD4-202ENST00000398417 EZH2Q15910 746 aaKnown RBP5.46□□□□□ -1.53
SMAD4-202ENST00000398417 CT47A1Q5JQC4 288 aaPredicted RBP5.46□□□□□ -1.53
SMAD4-202ENST00000398417 SFMBT2Q5VUG0 894 aa5.46□□□□□ -1.53
SMAD4-202ENST00000398417 MAEAQ7L5Y9 396 aa5.46□□□□□ -1.53
SMAD4-202ENST00000398417 ZC3H12CQ9C0D7 883 aaKnown RBP5.46□□□□□ -1.53
SMAD4-202ENST00000398417 ANKZF1Q9H8Y5 726 aa5.46□□□□□ -1.53
SMAD4-202ENST00000398417 NRXN3Q9Y4C0 1643 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 LRRC53A6NM62 1247 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 VAV2P52735 878 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 USP14P54578 494 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 GNGT1P63211 74 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 PRPF4BQ13523 1007 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 TTLL12Q14166 644 aaPredicted RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 NOA1Q8NC60 698 aaKnown RBP5.46□□□□□ -1.54
SMAD4-202ENST00000398417 SH3GLB2Q9NR46 395 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 USP21Q9UK80 565 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 MCM3P25205 808 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 APBA1Q02410 837 aa5.46□□□□□ -1.54
SMAD4-202ENST00000398417 PDXDC1Q6P996 788 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms