RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 LETM2Q2VYF4 491 aa24.18■■□□□ 1.46
CPNE1-204ENST00000397443 LINC00301Q8NCQ3 95 aa24.18■■□□□ 1.46
CPNE1-204ENST00000397443 SPDYE3A6NKU9 549 aa24.17■■□□□ 1.46
CPNE1-204ENST00000397443 NASPP49321 788 aaPredicted RBP24.17■■□□□ 1.46
CPNE1-204ENST00000397443 OAZ1P54368 228 aa24.17■■□□□ 1.46
CPNE1-204ENST00000397443 CSPP1Q1MSJ5 1256 aa24.17■■□□□ 1.46
CPNE1-204ENST00000397443 NSMFQ6X4W1 530 aa24.17■■□□□ 1.46
CPNE1-204ENST00000397443 ANO3Q9BYT9 981 aa24.17■■□□□ 1.46
CPNE1-204ENST00000397443 TXNRD2Q9NNW7 524 aa24.17■■□□□ 1.46
CPNE1-204ENST00000397443 PNMA3Q9UL41 463 aa24.17■■□□□ 1.46
CPNE1-204ENST00000397443 SLC10A3P09131 477 aa24.16■■□□□ 1.46
CPNE1-204ENST00000397443 ME1P48163 572 aa24.16■■□□□ 1.46
CPNE1-204ENST00000397443 MB21D1Q8N884 522 aa24.16■■□□□ 1.46
CPNE1-204ENST00000397443 RCOR1Q9UKL0 485 aa24.16■■□□□ 1.46
CPNE1-204ENST00000397443 MRVI1Q9Y6F6 885 aa24.16■■□□□ 1.46
CPNE1-204ENST00000397443 SPTLC2O15270 562 aa24.16■■□□□ 1.46
CPNE1-204ENST00000397443 ANKRD23Q86SG2 305 aa24.16■■□□□ 1.46
CPNE1-204ENST00000397443 NEK8Q86SG6 692 aa24.16■■□□□ 1.46
CPNE1-204ENST00000397443 ATP2A1O14983 1001 aa24.15■■□□□ 1.46
CPNE1-204ENST00000397443 CCNT1O60563 726 aaKnown RBP24.15■■□□□ 1.46
CPNE1-204ENST00000397443 TRAPPC10P48553 1259 aa24.15■■□□□ 1.46
CPNE1-204ENST00000397443 TMEM87AQ8NBN3 555 aa24.15■■□□□ 1.46
CPNE1-204ENST00000397443 SPATC1LQ9H0A9 340 aa24.15■■□□□ 1.46
CPNE1-204ENST00000397443 RBPJLQ9UBG7 517 aa24.15■■□□□ 1.46
CPNE1-204ENST00000397443 PNMA2Q9UL42 364 aa24.15■■□□□ 1.46
CPNE1-204ENST00000397443 PIK3CDO00329 1044 aa24.14■■□□□ 1.46
CPNE1-204ENST00000397443 CNMDO75829 334 aa24.14■■□□□ 1.46
CPNE1-204ENST00000397443 YEATS4O95619 227 aa24.14■■□□□ 1.46
CPNE1-204ENST00000397443 UBXN2AP68543 259 aa24.14■■□□□ 1.46
CPNE1-204ENST00000397443 AP3B2Q13367 1082 aa24.14■■□□□ 1.46
CPNE1-204ENST00000397443 SLC39A14Q15043 492 aa24.14■■□□□ 1.46
CPNE1-204ENST00000397443 PTPAQ15257 358 aa24.14■■□□□ 1.46
CPNE1-204ENST00000397443 CYP4F22Q6NT55 531 aa24.14■■□□□ 1.46
CPNE1-204ENST00000397443 MCF2L2Q86YR7 1114 aa24.14■■□□□ 1.46
CPNE1-204ENST00000397443 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.14■■□□□ 1.46
CPNE1-204ENST00000397443 MYH7BA7E2Y1 1941 aa24.14■■□□□ 1.45
CPNE1-204ENST00000397443 FAM155AB1AL88 458 aaPredicted RBP24.14■■□□□ 1.45
CPNE1-204ENST00000397443 SLC30A10Q6XR72 485 aa24.14■■□□□ 1.45
CPNE1-204ENST00000397443 NCAPG2Q86XI2 1143 aa24.14■■□□□ 1.45
CPNE1-204ENST00000397443 A0A0G2JMZ2 1700 aa24.14■■□□□ 1.45
CPNE1-204ENST00000397443 GOLGA6L4A6NEF3 574 aa24.13■■□□□ 1.45
CPNE1-204ENST00000397443 MANSC4A6NHS7 340 aaPredicted RBP24.13■■□□□ 1.45
CPNE1-204ENST00000397443 Q3C1V9 767 aa24.13■■□□□ 1.45
CPNE1-204ENST00000397443 KCNG4Q8TDN1 519 aa24.13■■□□□ 1.45
CPNE1-204ENST00000397443 CCDC102AQ96A19 550 aa24.13■■□□□ 1.45
CPNE1-204ENST00000397443 ZIC5Q96T25 663 aa24.13■■□□□ 1.45
CPNE1-204ENST00000397443 ELP1O95163 1332 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 IGF2BP3O00425 579 aaKnown RBP eCLIP24.12■■□□□ 1.452e-7■■■■□ 20.3
CPNE1-204ENST00000397443 RPS6P62753 249 aaKnown RBP24.12■■□□□ 1.45
CPNE1-204ENST00000397443 RNF207Q6ZRF8 634 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 ACAD9Q9H845 621 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 COL20A1Q9P218 1284 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 CEP131Q9UPN4 1083 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 SLC45A1Q9Y2W3 748 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 TDP2O95551 362 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 FOSP01100 380 aaPredicted RBP24.12■■□□□ 1.45
CPNE1-204ENST00000397443 HSD17B4P51659 736 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 PTGDRQ13258 359 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 ANKRD13CQ8N6S4 541 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 PURBQ96QR8 312 aaKnown RBP24.12■■□□□ 1.45
CPNE1-204ENST00000397443 MOV10L1Q9BXT6 1211 aaKnown RBP24.12■■□□□ 1.45
CPNE1-204ENST00000397443 R3HDMLQ9H3Y0 253 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 PCDHA7Q9UN72 937 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 RABGAP1Q9Y3P9 1069 aa24.12■■□□□ 1.45
CPNE1-204ENST00000397443 BAATQ14032 418 aaPredicted RBP24.11■■□□□ 1.45
CPNE1-204ENST00000397443 WDR78Q5VTH9 848 aa24.11■■□□□ 1.45
CPNE1-204ENST00000397443 RIOX2Q8IUF8 465 aa24.11■■□□□ 1.45
CPNE1-204ENST00000397443 DDX49Q9Y6V7 483 aaKnown RBP24.11■■□□□ 1.45
CPNE1-204ENST00000397443 EDIL3O43854 480 aa24.1■■□□□ 1.45
CPNE1-204ENST00000397443 SYTL5Q8TDW5 730 aaPredicted RBP24.1■■□□□ 1.45
CPNE1-204ENST00000397443 PARK7Q99497 189 aaKnown RBP24.1■■□□□ 1.45
CPNE1-204ENST00000397443 TESPA1A2RU30 521 aaPredicted RBP24.1■■□□□ 1.45
CPNE1-204ENST00000397443 ERCC3P19447 782 aa24.1■■□□□ 1.45
CPNE1-204ENST00000397443 UBE2HP62256 183 aa24.1■■□□□ 1.45
CPNE1-204ENST00000397443 ERVK-9P63128 1117 aa24.1■■□□□ 1.45
CPNE1-204ENST00000397443 ERVK-24P63145 666 aa24.1■■□□□ 1.45
CPNE1-204ENST00000397443 ARHGAP4P98171 946 aa24.1■■□□□ 1.45
CPNE1-204ENST00000397443 TKFCQ3LXA3 575 aa24.1■■□□□ 1.45
CPNE1-204ENST00000397443 ZFP91Q96JP5 570 aaPredicted RBP24.1■■□□□ 1.45
CPNE1-204ENST00000397443 CLIC6Q96NY7 704 aa24.1■■□□□ 1.45
CPNE1-204ENST00000397443 MCTP2Q6DN12 878 aa24.09■■□□□ 1.45
CPNE1-204ENST00000397443 GPT2Q8TD30 523 aa24.09■■□□□ 1.45
CPNE1-204ENST00000397443 UIMC1Q96RL1 719 aa24.09■■□□□ 1.45
CPNE1-204ENST00000397443 A1CFQ9NQ94 594 aaKnown RBP24.09■■□□□ 1.45
CPNE1-204ENST00000397443 RBBP6Q7Z6E9 1792 aaKnown RBP24.09■■□□□ 1.45
CPNE1-204ENST00000397443 TRAK2O60296 914 aa24.08■■□□□ 1.45
CPNE1-204ENST00000397443 PTMSP20962 102 aa24.08■■□□□ 1.45
CPNE1-204ENST00000397443 APLP1P51693 650 aa24.08■■□□□ 1.45
CPNE1-204ENST00000397443 ANKRD35Q8N283 1001 aa24.08■■□□□ 1.45
CPNE1-204ENST00000397443 JMYQ8N9B5 988 aa24.08■■□□□ 1.45
CPNE1-204ENST00000397443 CHST13Q8NET6 341 aa24.08■■□□□ 1.45
CPNE1-204ENST00000397443 TMEM60Q9H2L4 133 aa24.08■■□□□ 1.45
CPNE1-204ENST00000397443 SLC37A4O43826 429 aa24.08■■□□□ 1.44
CPNE1-204ENST00000397443 SREBF1P36956 1147 aa24.08■■□□□ 1.44
CPNE1-204ENST00000397443 GRIN1Q05586 938 aa24.08■■□□□ 1.44
CPNE1-204ENST00000397443 POTEDQ86YR6 584 aa24.08■■□□□ 1.44
CPNE1-204ENST00000397443 TAAR1Q96RJ0 339 aa24.08■■□□□ 1.44
CPNE1-204ENST00000397443 NEMFO60524 1076 aa24.07■■□□□ 1.44
CPNE1-204ENST00000397443 ECM2O94769 699 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-204ENST00000397443 ATP2C1P98194 919 aaPredicted RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms