RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 CAMK2GQ13555 558 aaPredicted RBP6.14□□□□□ -1.43
GABPB1-204ENST00000396464 PPP2R5EQ16537 467 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 NKPD1Q17RQ9 610 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 SLC4A8Q2Y0W8 1093 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 SCARA3Q6AZY7 606 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 MRM1Q6IN84 353 aaKnown RBP6.14□□□□□ -1.43
GABPB1-204ENST00000396464 FAM196AQ6ZSG2 479 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 CYFIP1Q7L576 1253 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 FAM214BQ7L5A3 538 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 ENAHQ8N8S7 591 aaPredicted RBP6.14□□□□□ -1.43
GABPB1-204ENST00000396464 VPS37AQ8NEZ2 397 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 PJA1Q8NG27 643 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 OR6P1Q8NGX9 317 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 ZNF669Q96BR6 464 aaPredicted RBP6.14□□□□□ -1.43
GABPB1-204ENST00000396464 KIRREL1Q96J84 757 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 TOX2Q96NM4 488 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 RHOBTB2Q9BYZ6 727 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 CARS2Q9HA77 564 aaKnown RBP6.14□□□□□ -1.43
GABPB1-204ENST00000396464 SLC5A4Q9NY91 659 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 CYP8B1Q9UNU6 501 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 CTNND2Q9UQB3 1225 aa6.14□□□□□ -1.43
GABPB1-204ENST00000396464 PHLDB1Q86UU1 1377 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 PITPNM2Q9BZ72 1349 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 PIP5K1CO60331 668 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 PAGE1O75459 146 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 RFPL1O75677 317 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 LMNB1P20700 586 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 CALRP27797 417 aaKnown RBP6.13□□□□□ -1.43
GABPB1-204ENST00000396464 PPM1FP49593 454 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-204ENST00000396464 GEMIN4P57678 1058 aaKnown RBP6.13□□□□□ -1.43
GABPB1-204ENST00000396464 LMNB2Q03252 620 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 TCIRG1Q13488 830 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 FBLN7Q53RD9 439 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 SFRP5Q5T4F7 317 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 CDKAL1Q5VV42 579 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 C6orf15Q6UXA7 325 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-204ENST00000396464 HDXQ7Z353 690 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 UBE3DQ7Z6J8 389 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 LSRQ86X29 649 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-204ENST00000396464 CCDC89Q8N998 374 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 NGDNQ8NEJ9 315 aaKnown RBP6.13□□□□□ -1.43
GABPB1-204ENST00000396464 JPH3Q8WXH2 748 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-204ENST00000396464 LIN37Q96GY3 246 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-204ENST00000396464 CCDC120Q96HB5 630 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 STRBPQ96SI9 672 aaKnown RBP6.13□□□□□ -1.43
GABPB1-204ENST00000396464 SARGQ9BW04 601 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 CACNA2D2Q9NY47 1150 aa6.13□□□□□ -1.43
GABPB1-204ENST00000396464 ZNF503-AS2A6NEH8 195 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 TLR3O15455 904 aaKnown RBP6.12□□□□□ -1.43
GABPB1-204ENST00000396464 ABLIM3O94929 683 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 EOMESO95936 686 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 GLI1P08151 1106 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 CPEP16870 476 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 NTF4P34130 210 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 HALP42357 657 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 CASP7P55210 303 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 ETF1P62495 437 aaKnown RBP6.12□□□□□ -1.43
GABPB1-204ENST00000396464 MESP2Q0VG99 397 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 MFSD4AQ8N468 514 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 FBXO27Q8NI29 283 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 ZSCAN18Q8TBC5 510 aaPredicted RBP6.12□□□□□ -1.43
GABPB1-204ENST00000396464 WDR66Q8TBY9 1149 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 HSPA12BQ96MM6 686 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 MIPEPQ99797 713 aa6.12□□□□□ -1.43
GABPB1-204ENST00000396464 NCOA5Q9HCD5 579 aaKnown RBP6.12□□□□□ -1.43
GABPB1-204ENST00000396464 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.12□□□□□ -1.437e-6■■■■□ 20.5
GABPB1-204ENST00000396464 PRSS47A8MTI9 375 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 PRRT4C9JH25 899 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 ADCY3O60266 1144 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 NBNO60934 754 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 PGRP06401 933 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 VDRP11473 427 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 ZSCAN20P17040 1043 aaPredicted RBP6.11□□□□□ -1.43
GABPB1-204ENST00000396464 MCM4P33991 863 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 SARSP49591 514 aaKnown RBP6.11□□□□□ -1.43
GABPB1-204ENST00000396464 STRN3Q13033 797 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 CCDC93Q567U6 631 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 ZKSCAN2Q63HK3 967 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 SV2BQ7L1I2 683 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 SLC26A8Q96RN1 970 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 HERPUD2Q9BSE4 406 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 SELENOOQ9BVL4 669 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 SPATA9Q9BWV2 254 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 LRRC3Q9BY71 257 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 TRIM8Q9BZR9 551 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 RSPH9Q9H1X1 276 aaPredicted RBP6.11□□□□□ -1.43
GABPB1-204ENST00000396464 ATP13A1Q9HD20 1204 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 PRDM11Q9NQV5 511 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 ZNRF3Q9ULT6 936 aa6.11□□□□□ -1.43
GABPB1-204ENST00000396464 DNAJC25-GNG10A0A024R161 153 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 KLRG2A4D1S0 409 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-204ENST00000396464 H3BS24 57 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 PTMAP06454 111 aaKnown RBP6.1□□□□□ -1.43
GABPB1-204ENST00000396464 CELA3AP09093 270 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 RING1Q06587 406 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 LONRF2Q1L5Z9 754 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
GABPB1-204ENST00000396464 CXorf57Q6NSI4 855 aaKnown RBP6.1□□□□□ -1.43
GABPB1-204ENST00000396464 CNNM4Q6P4Q7 775 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms