RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 RBM8AQ9Y5S9 174 aaKnown RBP16.02■□□□□ 0.16
CXCL12-205ENST00000395794 ASTN1O14525 1302 aa16.01■□□□□ 0.15
CXCL12-205ENST00000395794 MROH7Q68CQ1 1323 aa16.01■□□□□ 0.15
CXCL12-205ENST00000395794 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.01■□□□□ 0.15
CXCL12-205ENST00000395794 MYADML2A6NDP7 307 aa16.01■□□□□ 0.15
CXCL12-205ENST00000395794 KLRF2D3W0D1 207 aa16.01■□□□□ 0.15
CXCL12-205ENST00000395794 DYNC1LI2O43237 492 aaPredicted RBP16.01■□□□□ 0.15
CXCL12-205ENST00000395794 ADCY6O43306 1168 aa16.01■□□□□ 0.15
CXCL12-205ENST00000395794 CLTBP09497 229 aa16.01■□□□□ 0.15
CXCL12-205ENST00000395794 TRAF1Q13077 416 aa16.01■□□□□ 0.15
CXCL12-205ENST00000395794 TMEM67Q5HYA8 995 aa16.01■□□□□ 0.15
CXCL12-205ENST00000395794 CCSAPQ6IQ19 270 aaPredicted RBP16.01■□□□□ 0.15
CXCL12-205ENST00000395794 CASC1Q6TDU7 716 aa16.01■□□□□ 0.15
CXCL12-205ENST00000395794 JMJD4Q9H9V9 463 aa16.01■□□□□ 0.15
CXCL12-205ENST00000395794 PDLIM7Q9NR12 457 aa16.01■□□□□ 0.15
CXCL12-205ENST00000395794 Q9Y3F1 56 aa16.01■□□□□ 0.15
CXCL12-205ENST00000395794 CABYRO75952 493 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 SMPD1P17405 629 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 FSCN1Q16658 493 aaKnown RBP16■□□□□ 0.15
CXCL12-205ENST00000395794 QRICH1Q2TAL8 776 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 BMP2KLQ5H9B9 411 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 TAPT1Q6NXT6 567 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 ANKRD33Q7Z3H0 272 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 CATIPQ7Z7H3 387 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 TOX2Q96NM4 488 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 ESYT1Q9BSJ8 1104 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 AMNQ9BXJ7 453 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 PDGFCQ9NRA1 345 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 TMEM39AQ9NV64 488 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 GNEQ9Y223 722 aaKnown RBP16■□□□□ 0.15
CXCL12-205ENST00000395794 DDX49Q9Y6V7 483 aaKnown RBP16■□□□□ 0.15
CXCL12-205ENST00000395794 DNAH12Q6ZR08 3092 aa16■□□□□ 0.15
CXCL12-205ENST00000395794 A0A0U1RQG5 324 aaPredicted RBP15.99■□□□□ 0.15
CXCL12-205ENST00000395794 RAG1P15918 1043 aa15.99■□□□□ 0.15
CXCL12-205ENST00000395794 NKX3-2P78367 333 aa15.99■□□□□ 0.15
CXCL12-205ENST00000395794 BEX3Q00994 111 aa15.99■□□□□ 0.15
CXCL12-205ENST00000395794 LRIT3Q3SXY7 679 aa15.99■□□□□ 0.15
CXCL12-205ENST00000395794 BRDTQ58F21 947 aaPredicted RBP15.99■□□□□ 0.15
CXCL12-205ENST00000395794 CHST3Q7LGC8 479 aa15.99■□□□□ 0.15
CXCL12-205ENST00000395794 STAG2Q8N3U4 1231 aa15.99■□□□□ 0.15
CXCL12-205ENST00000395794 WDR11Q9BZH6 1224 aa15.99■□□□□ 0.15
CXCL12-205ENST00000395794 ANO2Q9NQ90 1003 aa15.99■□□□□ 0.15
CXCL12-205ENST00000395794 TRIOBPQ9H2D6 2365 aa15.99■□□□□ 0.15
CXCL12-205ENST00000395794 SMCHD1A6NHR9 2005 aa15.99■□□□□ 0.15
CXCL12-205ENST00000395794 TRIM43BA6NCK2 446 aa15.98■□□□□ 0.15
CXCL12-205ENST00000395794 PALM3A6NDB9 673 aaPredicted RBP15.98■□□□□ 0.15
CXCL12-205ENST00000395794 KIAA0355O15063 1070 aa15.98■□□□□ 0.15
CXCL12-205ENST00000395794 TLR3O15455 904 aaKnown RBP15.98■□□□□ 0.15
CXCL12-205ENST00000395794 IRX5P78411 483 aaPredicted RBP15.98■□□□□ 0.15
CXCL12-205ENST00000395794 GRM4Q14833 912 aa15.98■□□□□ 0.15
CXCL12-205ENST00000395794 DUSP28Q4G0W2 176 aa15.98■□□□□ 0.15
CXCL12-205ENST00000395794 SH3RF1Q7Z6J0 888 aa15.98■□□□□ 0.15
CXCL12-205ENST00000395794 NSUN6Q8TEA1 469 aaKnown RBP15.98■□□□□ 0.15
CXCL12-205ENST00000395794 BADQ92934 168 aa15.98■□□□□ 0.15
CXCL12-205ENST00000395794 TRIM43Q96BQ3 446 aaPredicted RBP15.98■□□□□ 0.15
CXCL12-205ENST00000395794 CCDC136Q96JN2 1154 aa15.98■□□□□ 0.15
CXCL12-205ENST00000395794 MAD2L2Q9UI95 211 aa15.98■□□□□ 0.15
CXCL12-205ENST00000395794 RANBP2P49792 3224 aaKnown RBP15.98■□□□□ 0.15
CXCL12-205ENST00000395794 ARVCFO00192 962 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 ZBTB5O15062 677 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 MCM5P33992 734 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 CPT1AP50416 773 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 PPP2R5BQ15173 497 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 RNF20Q5VTR2 975 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 CXCL17Q6UXB2 119 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 NFXL1Q6ZNB6 911 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 STOX1Q6ZVD7 989 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 HOMER1Q86YM7 354 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 TMTC2Q8N394 836 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 SCFD2Q8WU76 684 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 LRCH3Q96II8 777 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 SEZ6LQ9BYH1 1024 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 LSG1Q9H089 658 aaKnown RBP15.97■□□□□ 0.15
CXCL12-205ENST00000395794 GPHNQ9NQX3 736 aaPredicted RBP15.97■□□□□ 0.15
CXCL12-205ENST00000395794 PCDHA1Q9Y5I3 950 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 TAF6LQ9Y6J9 622 aa15.97■□□□□ 0.15
CXCL12-205ENST00000395794 RBM47A0AV96 593 aaKnown RBP15.96■□□□□ 0.15
CXCL12-205ENST00000395794 SOX1O00570 391 aaPredicted RBP15.96■□□□□ 0.15
CXCL12-205ENST00000395794 NKRFO15226 690 aaKnown RBP eCLIP15.96■□□□□ 0.15
CXCL12-205ENST00000395794 CTAGE5O15320 804 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 PRC1O43663 620 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 CFBP00751 764 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 EDNRBP24530 442 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 KIF5BP33176 963 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 CDK7P50613 346 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 FAAP100Q0VG06 881 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 ARHGEF16Q5VV41 709 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 GPR153Q6NV75 609 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 MB21D2Q8IYB1 491 aaPredicted RBP15.96■□□□□ 0.15
CXCL12-205ENST00000395794 OR6J1Q8NGC5 347 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 CTCFLQ8NI51 663 aaPredicted RBP15.96■□□□□ 0.15
CXCL12-205ENST00000395794 SP7Q8TDD2 431 aaPredicted RBP15.96■□□□□ 0.15
CXCL12-205ENST00000395794 SYTL5Q8TDW5 730 aaPredicted RBP15.96■□□□□ 0.15
CXCL12-205ENST00000395794 IWS1Q96ST2 819 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 RMDN3Q96TC7 470 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 MTA3Q9BTC8 594 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 POLR3EQ9NVU0 708 aa15.96■□□□□ 0.15
CXCL12-205ENST00000395794 CCDC69A6NI79 296 aa15.95■□□□□ 0.14
CXCL12-205ENST00000395794 SLC27A2O14975 620 aa15.95■□□□□ 0.14
CXCL12-205ENST00000395794 NEFLP07196 543 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms