RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 NFKBIBQ15653 356 aa27.73■■■□□ 2.03
LRFN4-202ENST00000393952 TKFCQ3LXA3 575 aa27.73■■■□□ 2.03
LRFN4-202ENST00000393952 ANO1Q5XXA6 986 aa27.73■■■□□ 2.03
LRFN4-202ENST00000393952 SPATC1LQ9H0A9 340 aa27.73■■■□□ 2.03
LRFN4-202ENST00000393952 RABGAP1Q9Y3P9 1069 aa27.73■■■□□ 2.03
LRFN4-202ENST00000393952 MCF2L2Q86YR7 1114 aa27.73■■■□□ 2.03
LRFN4-202ENST00000393952 SMCR8Q8TEV9 937 aaPredicted RBP27.73■■■□□ 2.03
LRFN4-202ENST00000393952 RTEL1Q9NZ71 1219 aa27.73■■■□□ 2.03
LRFN4-202ENST00000393952 PCDHB6Q9Y5E3 794 aa27.73■■■□□ 2.03
LRFN4-202ENST00000393952 AP3B2Q13367 1082 aa27.72■■■□□ 2.03
LRFN4-202ENST00000393952 TEX2Q8IWB9 1127 aa27.72■■■□□ 2.03
LRFN4-202ENST00000393952 TBCKQ8TEA7 893 aa27.72■■■□□ 2.03
LRFN4-202ENST00000393952 GTF3C2Q8WUA4 911 aaPredicted RBP27.72■■■□□ 2.03
LRFN4-202ENST00000393952 ZIC5Q96T25 663 aa27.72■■■□□ 2.03
LRFN4-202ENST00000393952 PARK7Q99497 189 aaKnown RBP27.72■■■□□ 2.03
LRFN4-202ENST00000393952 ANO3Q9BYT9 981 aa27.72■■■□□ 2.03
LRFN4-202ENST00000393952 POLR3EQ9NVU0 708 aa27.72■■■□□ 2.03
LRFN4-202ENST00000393952 MYH7BA7E2Y1 1941 aa27.72■■■□□ 2.03
LRFN4-202ENST00000393952 TRAPPC10P48553 1259 aa27.71■■■□□ 2.03
LRFN4-202ENST00000393952 NASPP49321 788 aaPredicted RBP27.71■■■□□ 2.03
LRFN4-202ENST00000393952 HSD17B4P51659 736 aa27.71■■■□□ 2.03
LRFN4-202ENST00000393952 SF3A1Q15459 793 aaKnown RBP27.71■■■□□ 2.03
LRFN4-202ENST00000393952 TTC38Q5R3I4 469 aa27.71■■■□□ 2.03
LRFN4-202ENST00000393952 FCHSD1Q86WN1 690 aa27.71■■■□□ 2.03
LRFN4-202ENST00000393952 RIOX2Q8IUF8 465 aa27.71■■■□□ 2.03
LRFN4-202ENST00000393952 LEO1Q8WVC0 666 aaPredicted RBP27.71■■■□□ 2.03
LRFN4-202ENST00000393952 SPATA32Q96LK8 384 aa27.71■■■□□ 2.03
LRFN4-202ENST00000393952 SCAND2PQ9GZW5 306 aaPredicted RBP27.71■■■□□ 2.03
LRFN4-202ENST00000393952 RASSF10A6NK89 507 aa27.7■■■□□ 2.03
LRFN4-202ENST00000393952 GOLGA6L22H0YM25 854 aa27.7■■■□□ 2.03
LRFN4-202ENST00000393952 FOSP01100 380 aaPredicted RBP27.7■■■□□ 2.03
LRFN4-202ENST00000393952 GHRHRQ02643 423 aa27.7■■■□□ 2.03
LRFN4-202ENST00000393952 DEFB115Q30KQ5 88 aa27.7■■■□□ 2.03
LRFN4-202ENST00000393952 MCTP2Q6DN12 878 aa27.7■■■□□ 2.03
LRFN4-202ENST00000393952 MOV10L1Q9BXT6 1211 aaKnown RBP27.7■■■□□ 2.03
LRFN4-202ENST00000393952 ACAD9Q9H845 621 aa27.7■■■□□ 2.03
LRFN4-202ENST00000393952 SPDYE3A6NKU9 549 aa27.69■■■□□ 2.02
LRFN4-202ENST00000393952 INHBEP58166 350 aa27.69■■■□□ 2.02
LRFN4-202ENST00000393952 Q3C1V9 767 aa27.69■■■□□ 2.02
LRFN4-202ENST00000393952 NSMFQ6X4W1 530 aa27.69■■■□□ 2.02
LRFN4-202ENST00000393952 PRPF40AO75400 957 aaKnown RBP27.69■■■□□ 2.02
LRFN4-202ENST00000393952 SREBF2Q12772 1141 aa27.69■■■□□ 2.02
LRFN4-202ENST00000393952 SLC30A10Q6XR72 485 aa27.69■■■□□ 2.02
LRFN4-202ENST00000393952 NEK8Q86SG6 692 aa27.69■■■□□ 2.02
LRFN4-202ENST00000393952 IFNL1Q8IU54 200 aa27.69■■■□□ 2.02
LRFN4-202ENST00000393952 CHST13Q8NET6 341 aa27.69■■■□□ 2.02
LRFN4-202ENST00000393952 ZCCHC17Q9NP64 241 aaKnown RBP27.69■■■□□ 2.02
LRFN4-202ENST00000393952 RCOR1Q9UKL0 485 aa27.69■■■□□ 2.02
LRFN4-202ENST00000393952 YEATS4O95619 227 aa27.68■■■□□ 2.02
LRFN4-202ENST00000393952 GCLCP48506 637 aaPredicted RBP27.68■■■□□ 2.02
LRFN4-202ENST00000393952 ERVK-9P63128 1117 aa27.68■■■□□ 2.02
LRFN4-202ENST00000393952 ERVK-24P63145 666 aa27.68■■■□□ 2.02
LRFN4-202ENST00000393952 STK38Q15208 465 aa27.68■■■□□ 2.02
LRFN4-202ENST00000393952 ZNF174Q15697 407 aa27.68■■■□□ 2.02
LRFN4-202ENST00000393952 RNF207Q6ZRF8 634 aa27.68■■■□□ 2.02
LRFN4-202ENST00000393952 TMEM87AQ8NBN3 555 aa27.68■■■□□ 2.02
LRFN4-202ENST00000393952 LINC00301Q8NCQ3 95 aa27.68■■■□□ 2.02
LRFN4-202ENST00000393952 CAPNS2Q96L46 248 aa27.68■■■□□ 2.02
LRFN4-202ENST00000393952 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.68■■■□□ 2.02
LRFN4-202ENST00000393952 RPS6P62753 249 aaKnown RBP27.67■■■□□ 2.02
LRFN4-202ENST00000393952 PTPAQ15257 358 aa27.67■■■□□ 2.02
LRFN4-202ENST00000393952 NCAPG2Q86XI2 1143 aa27.67■■■□□ 2.02
LRFN4-202ENST00000393952 SAMD3Q8N6K7 520 aa27.67■■■□□ 2.02
LRFN4-202ENST00000393952 ANKRD13CQ8N6S4 541 aa27.67■■■□□ 2.02
LRFN4-202ENST00000393952 COL20A1Q9P218 1284 aa27.67■■■□□ 2.02
LRFN4-202ENST00000393952 DDX11L8A8MPP1 907 aa27.66■■■□□ 2.02
LRFN4-202ENST00000393952 EDIL3O43854 480 aa27.66■■■□□ 2.02
LRFN4-202ENST00000393952 BAATQ14032 418 aaPredicted RBP27.66■■■□□ 2.02
LRFN4-202ENST00000393952 CSPP1Q1MSJ5 1256 aa27.66■■■□□ 2.02
LRFN4-202ENST00000393952 LETM2Q2VYF4 491 aa27.66■■■□□ 2.02
LRFN4-202ENST00000393952 SYTL5Q8TDW5 730 aaPredicted RBP27.66■■■□□ 2.02
LRFN4-202ENST00000393952 R3HDMLQ9H3Y0 253 aa27.66■■■□□ 2.02
LRFN4-202ENST00000393952 LMBRD1Q9NUN5 540 aa27.66■■■□□ 2.02
LRFN4-202ENST00000393952 MAP3K20Q9NYL2 800 aaKnown RBP27.66■■■□□ 2.02
LRFN4-202ENST00000393952 SLC25A27O95847 323 aa27.65■■■□□ 2.02
LRFN4-202ENST00000393952 ERCC3P19447 782 aa27.65■■■□□ 2.02
LRFN4-202ENST00000393952 SLC39A14Q15043 492 aa27.65■■■□□ 2.02
LRFN4-202ENST00000393952 TAF1CQ15572 869 aaPredicted RBP27.65■■■□□ 2.02
LRFN4-202ENST00000393952 GPRC5AQ8NFJ5 357 aa27.65■■■□□ 2.02
LRFN4-202ENST00000393952 A1CFQ9NQ94 594 aaKnown RBP27.65■■■□□ 2.02
LRFN4-202ENST00000393952 ELP1O95163 1332 aa27.65■■■□□ 2.02
LRFN4-202ENST00000393952 AOC2O75106 756 aa27.65■■■□□ 2.02
LRFN4-202ENST00000393952 MCM7P33993 719 aa27.65■■■□□ 2.02
LRFN4-202ENST00000393952 SREBF1P36956 1147 aa27.65■■■□□ 2.02
LRFN4-202ENST00000393952 TM4SF4P48230 202 aa27.65■■■□□ 2.02
LRFN4-202ENST00000393952 NOGQ13253 232 aa27.65■■■□□ 2.02
LRFN4-202ENST00000393952 MORF4L1Q9UBU8 362 aa27.65■■■□□ 2.02
LRFN4-202ENST00000393952 FBXO40Q9UH90 709 aa27.65■■■□□ 2.02
LRFN4-202ENST00000393952 ADGRA2Q96PE1 1338 aa27.64■■■□□ 2.01
LRFN4-202ENST00000393952 SPTLC2O15270 562 aa27.64■■■□□ 2.01
LRFN4-202ENST00000393952 COPB2P35606 906 aa27.64■■■□□ 2.01
LRFN4-202ENST00000393952 ARHGAP4P98171 946 aa27.64■■■□□ 2.01
LRFN4-202ENST00000393952 CYP39A1Q9NYL5 469 aa27.64■■■□□ 2.01
LRFN4-202ENST00000393952 CEP131Q9UPN4 1083 aa27.64■■■□□ 2.01
LRFN4-202ENST00000393952 CCNT1O60563 726 aaKnown RBP27.63■■■□□ 2.01
LRFN4-202ENST00000393952 GADD45BO75293 160 aaPredicted RBP27.63■■■□□ 2.01
LRFN4-202ENST00000393952 KCNG4Q8TDN1 519 aa27.63■■■□□ 2.01
LRFN4-202ENST00000393952 CRYGNQ8WXF5 182 aa27.63■■■□□ 2.01
LRFN4-202ENST00000393952 MRVI1Q9Y6F6 885 aa27.63■■■□□ 2.01
LRFN4-202ENST00000393952 TDP2O95551 362 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms