RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 EFCAB8A8MWE9 144 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 DAPK3O43293 454 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 GTPBP6O43824 516 aaPredicted RBP5.49□□□□□ -1.53
LTN1-202ENST00000389194 ADCY8P40145 1251 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 DNM2P50570 870 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 ARFGAP2Q8N6H7 521 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 PAGE5Q96GU1 130 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 MYO5CQ9NQX4 1742 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 TMEM94Q12767 1356 aa5.49□□□□□ -1.53
LTN1-202ENST00000389194 USP6P35125 1406 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 SSH2Q76I76 1423 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 WDR91A4D1P6 747 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 RGS16O15492 202 aaPredicted RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 PRPF6O94906 941 aaKnown RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 EIF4A3P38919 411 aaKnown RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 ERFP50548 548 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 MRPS9P82933 396 aaKnown RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 ODR4Q5SWX8 454 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 GKAP1Q5VSY0 366 aaPredicted RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 CYP4F22Q6NT55 531 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 HAUS1Q96CS2 278 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 ABCB6Q9NP58 842 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 TMEM260Q9NX78 707 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 ERBB3P21860 1342 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 LRRIQ4A6NIV6 560 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 NCK2O43639 380 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 FERP16591 822 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 CLNS1AP54105 237 aaKnown RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 EAPPQ56P03 285 aaPredicted RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 PLA2G4DQ86XP0 818 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 KIFAP3Q92845 792 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 MMS19Q96T76 1030 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 DDIT3P35638 169 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 PLTPP55058 493 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 TTBK2Q6IQ55 1244 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 CCDC84Q86UT8 332 aaPredicted RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 CCDC110Q8TBZ0 833 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 POLR3EQ9NVU0 708 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 SEPT10Q9P0V9 454 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 ADAMTS1Q9UHI8 967 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 PLXNC1O60486 1568 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 F5H423 210 aaPredicted RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 NDC80O14777 642 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 RNF40O75150 1001 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 TUBB4AP04350 444 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 PEX19P40855 299 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 GABPB1Q06547 395 aaPredicted RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 CTTNQ14247 550 aaKnown RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 UBE3CQ15386 1083 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 KMT5BQ4FZB7 885 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 HHATQ5VTY9 493 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 SH3RF3Q8TEJ3 882 aaPredicted RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 CAPS2Q9BXY5 557 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.48□□□□□ -1.53
LTN1-202ENST00000389194 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.48□□□□□ -1.53
LTN1-202ENST00000389194 PRDM15P57071 1507 aaPredicted RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 KCNQ2O43526 872 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 ABL1P00519 1130 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 KRT31Q15323 416 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 ARHGEF16Q5VV41 709 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 RILPQ96NA2 401 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 CDC23Q9UJX2 597 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 USP17L15C9J2P7 530 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 USP17L13C9JLJ4 530 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 USP17L11C9JVI0 530 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 USP17L18D6R9N7 530 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 USP17L22D6RA61 530 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 USP17L17D6RBQ6 530 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 USP17L19D6RCP7 530 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 USP17L20D6RJB6 530 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 H7C1D1 291 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 USP17L24Q0WX57 530 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 EXOC3L4Q17RC7 722 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 USP17L6PQ6QN14 398 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 USP49Q70CQ1 688 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 TMC4Q7Z404 712 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 SRGAP1Q7Z6B7 1085 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 FBXO11Q86XK2 927 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 SULF1Q8IWU6 871 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 TRIM58Q8NG06 486 aa5.48□□□□□ -1.53
LTN1-202ENST00000389194 LARP4BQ92615 738 aaKnown RBP5.48□□□□□ -1.53
LTN1-202ENST00000389194 HEXIM1O94992 359 aaKnown RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 GDAP1Q8TB36 358 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 CSRNP1Q96S65 589 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 KCNF1Q9H3M0 494 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 NHEJ1Q9H9Q4 299 aaPredicted RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 MLXIPQ9HAP2 919 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 ERCC6L2Q5T890 1561 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 IRX3P78415 501 aaPredicted RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 FOXD4Q12950 439 aaPredicted RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 ZNF394Q53GI3 561 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 ARMCX5Q6P1M9 558 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 POMGNT1Q8WZA1 660 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 CELF1Q92879 486 aaKnown RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 FERMT1Q9BQL6 677 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 KDM5DQ9BY66 1539 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 BCRP11274 1271 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 STX2P32856 288 aa5.47□□□□□ -1.53
LTN1-202ENST00000389194 LACTBP83111 547 aaPredicted RBP5.47□□□□□ -1.53
LTN1-202ENST00000389194 VWA3BQ502W6 1294 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms