RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 A0A1W2PQU0 124 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 STXBP3O00186 592 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 TBX1O43435 398 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 PPP1R11O60927 126 aaPredicted RBP3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 THBDP07204 575 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 DBHP09172 617 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 GLI4P10075 376 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 FBLN1P23142 703 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 SEPHS1P49903 392 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 CYP4F8P98187 520 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 SCRN1Q12765 414 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 MAP4K2Q12851 820 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 NR1I3Q14994 352 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 SF3A1Q15459 793 aaKnown RBP3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 DPY19L1Q2PZI1 675 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 SLC35F1Q5T1Q4 408 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 ZNF648Q5T619 568 aaPredicted RBP3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 SOGA3Q5TF21 947 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 KSR1Q8IVT5 923 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 CD320Q9NPF0 282 aa3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 MBD1Q9UIS9 605 aaPredicted RBP3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 R3HCC1Q9Y3T6 440 aaKnown RBP3.7□□□□□ -1.82
RNU6-541P-201ENST00000384709 C7orf72A4D263 438 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 IQCA1LA6NCM1 817 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 DBX1A6NMT0 343 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 MPOP05164 745 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 FGFR1P11362 822 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 ARL4AP40617 200 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 MAPKAPK2P49137 400 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 GALK1P51570 392 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 PPP2R2AP63151 447 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 CAP1Q01518 475 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 TMEM62Q0P6H9 643 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 RASA3Q14644 834 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 LONRF2Q1L5Z9 754 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 SV2CQ496J9 727 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 DENND5AQ6IQ26 1287 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 RSPO2Q6UXX9 243 aaPredicted RBP3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 NAT16Q8N8M0 369 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 NUP43Q8NFH3 380 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 PLEKHO2Q8TD55 490 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 BTN2A2Q8WVV5 523 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 SLC38A3Q99624 504 aa3.69□□□□□ -1.82
RNU6-541P-201ENST00000384709 NPHP3-ACAD11A0A0J9YXS1 232 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 ETV2O00321 342 aaPredicted RBP3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 IRS4O14654 1257 aaPredicted RBP3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 PDPK1O15530 556 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 ADCY3O60266 1144 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 CYBBP04839 570 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 C1QTNF9P0C862 333 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 PLS3P13797 630 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 VIPR1P32241 457 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 KCNAB2Q13303 367 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 HSP90AA2PQ14568 343 aaPredicted RBP3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 SF1Q15637 639 aaKnown RBP3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 INF2Q27J81 1249 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 ADGRF1Q5T601 910 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 MBLAC2Q68D91 279 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 PAQR3Q6TCH7 311 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 RPTNQ6XPR3 784 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 SYDE1Q6ZW31 735 aaPredicted RBP3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 JAMLQ86YT9 394 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 C1QL4Q86Z23 238 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 RIOX2Q8IUF8 465 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 CCDC103Q8IW40 242 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 NETO2Q8NC67 525 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 SREK1Q8WXA9 508 aaKnown RBP3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 DPF3Q92784 378 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 DIRC2Q96SL1 478 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 LGR4Q9BXB1 951 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 CNTD2Q9H8S5 307 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 GPRC5CQ9NQ84 441 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 ARHGEF4Q9NR80 690 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 ST7Q9NRC1 585 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 TMEFF2Q9UIK5 374 aaPredicted RBP3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 X6R8D5 127 aa3.68□□□□□ -1.82
RNU6-541P-201ENST00000384709 AGRPO00253 132 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 N4BP3O15049 544 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 DLX3O60479 287 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 NPHS1O60500 1241 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 IGFBP6P24592 240 aaPredicted RBP3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 PDE6BP35913 854 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 GRIA2P42262 883 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 GTF2A2P52657 109 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 DLG4P78352 724 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 OLFML2BQ68BL8 750 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 ZNF605Q86T29 641 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 AMIGO3Q86WK7 504 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 CPNE8Q86YQ8 564 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 SIRT2Q8IXJ6 389 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 LRRC47Q8N1G4 583 aaKnown RBP3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 TMEM145Q8NBT3 493 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 RCBTB1Q8NDN9 531 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 KCTD13Q8WZ19 329 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 OSBP2Q969R2 916 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 TSPAN17Q96FV3 270 aa3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 AARSD1Q9BTE6 412 aaKnown RBP3.67□□□□□ -1.82
RNU6-541P-201ENST00000384709 TRIM55Q9BYV6 548 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms