RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 MLKLQ8NB16 471 aa24.28■■□□□ 1.48
GMDS-202ENST00000380815 KIFC2Q96AC6 838 aa24.28■■□□□ 1.48
GMDS-202ENST00000380815 PIK3CDO00329 1044 aa24.27■■□□□ 1.48
GMDS-202ENST00000380815 PTMAP06454 111 aaKnown RBP24.27■■□□□ 1.48
GMDS-202ENST00000380815 TECP42680 631 aa24.27■■□□□ 1.48
GMDS-202ENST00000380815 ZNF75DP51815 510 aa24.27■■□□□ 1.48
GMDS-202ENST00000380815 RRAGBQ5VZM2 374 aa24.27■■□□□ 1.48
GMDS-202ENST00000380815 GGA3Q9NZ52 723 aa24.27■■□□□ 1.48
GMDS-202ENST00000380815 DDX25Q9UHL0 483 aaKnown RBP24.27■■□□□ 1.48
GMDS-202ENST00000380815 DACH1Q9UI36 760 aa24.27■■□□□ 1.48
GMDS-202ENST00000380815 OPLAHO14841 1288 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 WDR46O15213 610 aaKnown RBP24.26■■□□□ 1.47
GMDS-202ENST00000380815 HIRAP54198 1017 aaPredicted RBP24.26■■□□□ 1.47
GMDS-202ENST00000380815 NCAPHQ15003 741 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 TMEM266Q2M3C6 531 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 MOXD1Q6UVY6 613 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 CRYGNQ8WXF5 182 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 MYH7BA7E2Y1 1941 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 CYP3A7-CYP3A51PA0A087WV96 503 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 ESPNB1AK53 854 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 GTPBP6O43824 516 aaPredicted RBP24.26■■□□□ 1.47
GMDS-202ENST00000380815 CYP3A7P24462 503 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 INPP5BP32019 993 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 TXKP42681 527 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 TPM4P67936 248 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 PDIA5Q14554 519 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 NAALADL2Q58DX5 795 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.26■■□□□ 1.47
GMDS-202ENST00000380815 CABP7Q86V35 215 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 FAM43AQ8N2R8 423 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 RASSF8Q8NHQ8 419 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 MTRQ99707 1265 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 RAB34Q9BZG1 259 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 CUEDC2Q9H467 287 aa24.26■■□□□ 1.47
GMDS-202ENST00000380815 SPDYE3A6NKU9 549 aa24.25■■□□□ 1.47
GMDS-202ENST00000380815 SCYL3Q8IZE3 742 aa24.25■■□□□ 1.47
GMDS-202ENST00000380815 MYL5Q02045 173 aa24.24■■□□□ 1.47
GMDS-202ENST00000380815 CT47A1Q5JQC4 288 aaPredicted RBP24.24■■□□□ 1.47
GMDS-202ENST00000380815 ZSCAN30Q86W11 494 aa24.24■■□□□ 1.47
GMDS-202ENST00000380815 MBOAT7Q96N66 472 aa24.24■■□□□ 1.47
GMDS-202ENST00000380815 MAGEF1Q9HAY2 307 aa24.24■■□□□ 1.47
GMDS-202ENST00000380815 FBXO28Q9NVF7 368 aa24.24■■□□□ 1.47
GMDS-202ENST00000380815 RNF181Q9P0P0 153 aa24.24■■□□□ 1.47
GMDS-202ENST00000380815 UTRNP46939 3433 aa24.24■■□□□ 1.47
GMDS-202ENST00000380815 PITPNM2Q9BZ72 1349 aa24.24■■□□□ 1.47
GMDS-202ENST00000380815 MYL1P05976 194 aa24.24■■□□□ 1.47
GMDS-202ENST00000380815 P2RX7Q99572 595 aaKnown RBP24.24■■□□□ 1.47
GMDS-202ENST00000380815 WDR18Q9BV38 432 aa24.24■■□□□ 1.47
GMDS-202ENST00000380815 DOCK1Q14185 1865 aa24.23■■□□□ 1.47
GMDS-202ENST00000380815 DDNO94850 711 aaPredicted RBP24.23■■□□□ 1.47
GMDS-202ENST00000380815 CDC25BP30305 580 aa24.23■■□□□ 1.47
GMDS-202ENST00000380815 SREBF1P36956 1147 aa24.23■■□□□ 1.47
GMDS-202ENST00000380815 USP14P54578 494 aa24.23■■□□□ 1.47
GMDS-202ENST00000380815 ARHGAP4P98171 946 aa24.23■■□□□ 1.47
GMDS-202ENST00000380815 CCDC174Q6PII3 467 aa24.23■■□□□ 1.47
GMDS-202ENST00000380815 PRPF38AQ8NAV1 312 aaKnown RBP24.23■■□□□ 1.47
GMDS-202ENST00000380815 HAS1Q92839 578 aa24.23■■□□□ 1.47
GMDS-202ENST00000380815 MRFAP1L1Q96HT8 127 aa24.23■■□□□ 1.47
GMDS-202ENST00000380815 LRWD1Q9UFC0 647 aa24.23■■□□□ 1.47
GMDS-202ENST00000380815 MRPL11Q9Y3B7 192 aaKnown RBP24.23■■□□□ 1.47
GMDS-202ENST00000380815 YBX3P16989 372 aaKnown RBP eCLIP24.22■■□□□ 1.479e-9■□□□□ 8.4
GMDS-202ENST00000380815 CASP1P29466 404 aa24.22■■□□□ 1.47
GMDS-202ENST00000380815 PRAMEF18Q5VWM3 479 aa24.22■■□□□ 1.47
GMDS-202ENST00000380815 STAMQ92783 540 aa24.22■■□□□ 1.47
GMDS-202ENST00000380815 WRNIP1Q96S55 665 aa24.22■■□□□ 1.47
GMDS-202ENST00000380815 SLF1Q9BQI6 1058 aa24.22■■□□□ 1.47
GMDS-202ENST00000380815 MMTAG2Q9BU76 263 aaKnown RBP24.22■■□□□ 1.47
GMDS-202ENST00000380815 TTC12Q9H892 705 aaPredicted RBP24.22■■□□□ 1.47
GMDS-202ENST00000380815 KBTBD4Q9NVX7 518 aa24.22■■□□□ 1.47
GMDS-202ENST00000380815 GOLGA6L6A8MZA4 724 aa24.21■■□□□ 1.47
GMDS-202ENST00000380815 TAL1P17542 331 aaPredicted RBP24.21■■□□□ 1.47
GMDS-202ENST00000380815 LMOD1P29536 600 aaPredicted RBP24.21■■□□□ 1.47
GMDS-202ENST00000380815 AS3MTQ9HBK9 375 aa24.21■■□□□ 1.47
GMDS-202ENST00000380815 PICK1Q9NRD5 415 aa24.21■■□□□ 1.47
GMDS-202ENST00000380815 ADARB2Q9NS39 739 aaKnown RBP24.21■■□□□ 1.47
GMDS-202ENST00000380815 ABCB11O95342 1321 aa24.21■■□□□ 1.47
GMDS-202ENST00000380815 PLCG1P19174 1290 aa24.21■■□□□ 1.47
GMDS-202ENST00000380815 ERCC5P28715 1186 aaPredicted RBP24.21■■□□□ 1.47
GMDS-202ENST00000380815 CUL4BQ13620 913 aa24.21■■□□□ 1.47
GMDS-202ENST00000380815 SUPT20HL1Q3ZLR7 823 aa24.21■■□□□ 1.47
GMDS-202ENST00000380815 CALML4Q96GE6 196 aa24.21■■□□□ 1.47
GMDS-202ENST00000380815 BLZF1Q9H2G9 400 aa24.21■■□□□ 1.47
GMDS-202ENST00000380815 KCNMB3Q9NPA1 279 aa24.21■■□□□ 1.47
GMDS-202ENST00000380815 PTPRAP18433 802 aa24.2■■□□□ 1.46
GMDS-202ENST00000380815 HOXA13P31271 388 aaPredicted RBP24.2■■□□□ 1.46
GMDS-202ENST00000380815 MTMR2Q13614 643 aa24.2■■□□□ 1.46
GMDS-202ENST00000380815 LDHDQ86WU2 507 aa24.2■■□□□ 1.46
GMDS-202ENST00000380815 ZKSCAN4Q969J2 545 aaPredicted RBP24.2■■□□□ 1.46
GMDS-202ENST00000380815 KLRG1Q96E93 195 aa24.2■■□□□ 1.46
GMDS-202ENST00000380815 HSD3B7Q9H2F3 369 aa24.2■■□□□ 1.46
GMDS-202ENST00000380815 EMILIN3Q9NT22 766 aa24.2■■□□□ 1.46
GMDS-202ENST00000380815 RMND1Q9NWS8 449 aa24.2■■□□□ 1.46
GMDS-202ENST00000380815 GCOM1H8Y6P7 765 aaPredicted RBP24.19■■□□□ 1.46
GMDS-202ENST00000380815 ICAM1P05362 532 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 POLR2MP0CAP2 368 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 CIITAP33076 1130 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 BACE1P56817 501 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 Q4G0T1 1027 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 PCDHA12Q9UN75 941 aa24.19■■□□□ 1.46
GMDS-202ENST00000380815 ZKSCAN5Q9Y2L8 839 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms