RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ZNF536O15090 1300 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 MUC3AQ02505 3323 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 TTC28Q96AY4 2481 aa10.77□□□□□ -0.69
HMGN1-202ENST00000380747 ALPK3Q96L96 1907 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 CCDC69A6NI79 296 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 SH2B2O14492 632 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-202ENST00000380747 HOXC6P09630 235 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 HOXB3P14651 431 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-202ENST00000380747 TAL1P17542 331 aaPredicted RBP10.76□□□□□ -0.69
HMGN1-202ENST00000380747 HSPA4P34932 840 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 TKFCQ3LXA3 575 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 ADCK5Q3MIX3 580 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 MFSD14CQ5VZR4 134 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 MAMSTRQ6ZN01 415 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 TDHQ8IZJ6 230 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 ANKRD35Q8N283 1001 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 CHST13Q8NET6 341 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 DIS3LQ8TF46 1054 aaKnown RBP10.76□□□□□ -0.69
HMGN1-202ENST00000380747 TRERF1Q96PN7 1200 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 MTA3Q9BTC8 594 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 ACAD9Q9H845 621 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 LY9Q9HBG7 655 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 MTMR10Q9NXD2 777 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 FLRT1Q9NZU1 646 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 OGDHLQ9ULD0 1010 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 SNX14Q9Y5W7 946 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 PLXNB2O15031 1838 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 RPTORQ8N122 1335 aa10.76□□□□□ -0.69
HMGN1-202ENST00000380747 COL11A1P12107 1806 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-202ENST00000380747 KLRF2D3W0D1 207 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 ICAM1P05362 532 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 CYP2C19P33261 490 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 CACNB2Q08289 660 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-202ENST00000380747 GRM4Q14833 912 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 CDC37Q16543 378 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-202ENST00000380747 TSGA10IPQ3SY00 556 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 DHX32Q7L7V1 743 aaKnown RBP10.75□□□□□ -0.69
HMGN1-202ENST00000380747 C7orf61Q8IZ16 206 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 ADGRF4Q8IZF3 695 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 ZNF654Q8IZM8 581 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 TMTC2Q8N394 836 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 STAG2Q8N3U4 1231 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 KCNB2Q92953 911 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 TCEANC2Q96MN5 208 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 JAKMIP1Q96N16 626 aaKnown RBP10.75□□□□□ -0.69
HMGN1-202ENST00000380747 MYL10Q9BUA6 226 aa10.75□□□□□ -0.69
HMGN1-202ENST00000380747 HMX1Q9NP08 348 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-202ENST00000380747 CDH23Q9H251 3354 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 DOCK3Q8IZD9 2030 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 PALM3A6NDB9 673 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-202ENST00000380747 DDAH1O94760 285 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 HMGB1P09429 215 aaKnown RBP10.74□□□□□ -0.69
HMGN1-202ENST00000380747 CPA1P15085 419 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 CNGA1P29973 690 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 MAGEA10P43363 369 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-202ENST00000380747 FGD1P98174 961 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 TROAPQ12815 778 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 ZNF792Q3KQV3 632 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 USH1GQ495M9 461 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 MUM1L1Q5H9M0 696 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 MAP3K21Q5TCX8 1036 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 OLFML2BQ68BL8 750 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 NSMFQ6X4W1 530 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 SYNE3Q6ZMZ3 975 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 RAB11FIP4Q86YS3 637 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 CTCFLQ8NI51 663 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-202ENST00000380747 MAML3Q96JK9 1138 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 C11orf49Q9H6J7 331 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 JMJD4Q9H9V9 463 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 MAD2L2Q9UI95 211 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 PNMA2Q9UL42 364 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 ZMYND8Q9ULU4 1186 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-202ENST00000380747 SLC12A7Q9Y666 1083 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 WDR19Q8NEZ3 1342 aa10.74□□□□□ -0.69
HMGN1-202ENST00000380747 ZNF236Q9UL36 1845 aa10.73□□□□□ -0.69
HMGN1-202ENST00000380747 EPB41L2O43491 1005 aaKnown RBP10.73□□□□□ -0.69
HMGN1-202ENST00000380747 RXRAP19793 462 aa10.73□□□□□ -0.69
HMGN1-202ENST00000380747 CCND3P30281 292 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-202ENST00000380747 LIFRP42702 1097 aa10.73□□□□□ -0.69
HMGN1-202ENST00000380747 EXOSC10Q01780 885 aaKnown RBP10.73□□□□□ -0.69
HMGN1-202ENST00000380747 QRICH1Q2TAL8 776 aa10.73□□□□□ -0.69
HMGN1-202ENST00000380747 ARSIQ5FYB1 569 aa10.73□□□□□ -0.69
HMGN1-202ENST00000380747 FAM109BQ6ICB4 259 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-202ENST00000380747 BLOC1S2Q6QNY1 142 aa10.73□□□□□ -0.69
HMGN1-202ENST00000380747 Q7L0L9 218 aa10.73□□□□□ -0.69
HMGN1-202ENST00000380747 HOMER1Q86YM7 354 aa10.73□□□□□ -0.69
HMGN1-202ENST00000380747 CCDC144CPQ8IYA2 1237 aa10.73□□□□□ -0.69
HMGN1-202ENST00000380747 KHSRPQ92945 711 aaKnown RBP eCLIP10.73□□□□□ -0.691e-7■■□□□ 13.3
HMGN1-202ENST00000380747 EPAS1Q99814 870 aa10.73□□□□□ -0.69
HMGN1-202ENST00000380747 USP26Q9BXU7 913 aa10.73□□□□□ -0.69
HMGN1-202ENST00000380747 A1CFQ9NQ94 594 aaKnown RBP10.73□□□□□ -0.69
HMGN1-202ENST00000380747 NAP1L2Q9ULW6 460 aaPredicted RBP10.73□□□□□ -0.69
HMGN1-202ENST00000380747 DIS3Q9Y2L1 958 aaKnown RBP10.73□□□□□ -0.69
HMGN1-202ENST00000380747 DNAJC25-GNG10A0A024R161 153 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 NFIBO00712 420 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 CALM1P0DP23 149 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 CALM2P0DP24 149 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 CALM3P0DP25 149 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 COL6A1P12109 1028 aa10.72□□□□□ -0.69
HMGN1-202ENST00000380747 CASTP20810 708 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms