RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 FASTKD5Q7L8L6 764 aaKnown RBP13.54□□□□□ -0.24
CHD3-203ENST00000380358 TAGAPQ8N103 731 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 PGBD3Q8N328 593 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 TMEM232C9JQI7 657 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 SERPIND1P05546 499 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 RPS6KB1P23443 525 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 RUFY4Q6ZNE9 571 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 ANKRD13CQ8N6S4 541 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 STAG1Q8WVM7 1258 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 PCDHA12Q9UN75 941 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 BBS5Q8N3I7 341 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 SERTAD1Q9UHV2 236 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 DPYSL4O14531 572 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 ALDH1B1P30837 517 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 ATG3Q9NT62 314 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 SLC12A6Q9UHW9 1150 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 PPP1R9AQ9ULJ8 1098 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 ABCC5O15440 1437 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 MEIS1O00470 390 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 TEKT4Q8WW24 435 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 ANKRD36BP1Q96IX9 119 aa13.54□□□□□ -0.24
CHD3-203ENST00000380358 GDF11O95390 407 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 PAK2Q13177 524 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 KCTD2Q14681 263 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 KCTD16Q68DU8 428 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 FBXO11Q86XK2 927 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 RNF139Q8WU17 664 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 TBC1D32Q96NH3 1257 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 CALN1Q9BXU9 219 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 CAPN7Q9Y6W3 813 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 FAM135AQ9P2D6 1515 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 NOS1P29475 1434 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 POLR2BP30876 1174 aaKnown RBP13.53□□□□□ -0.24
CHD3-203ENST00000380358 BCAMP50895 628 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 LRRC23Q53EV4 343 aaPredicted RBP13.53□□□□□ -0.24
CHD3-203ENST00000380358 CHURC1Q8WUH1 139 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 KLHL14Q9P2G3 628 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 PCDHB15Q9Y5E8 787 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 ABCC11Q96J66 1382 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 PDE6BP35913 854 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 MXD4Q14582 209 aaPredicted RBP13.53□□□□□ -0.24
CHD3-203ENST00000380358 CLIC2O15247 247 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 TMED1Q13445 227 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 PTK2BQ14289 1009 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 FRA10AC1Q70Z53 315 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 ANGEL1Q9UNK9 670 aaKnown RBP13.53□□□□□ -0.24
CHD3-203ENST00000380358 PCDH11XQ9BZA7 1347 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 PCDH11YQ9BZA8 1340 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 AGRPO00253 132 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 JAK2O60674 1132 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 KRT25Q7Z3Z0 450 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 CD109Q6YHK3 1445 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 BASP1P80723 227 aaKnown RBP13.53□□□□□ -0.24
CHD3-203ENST00000380358 CACNB2Q08289 660 aaPredicted RBP13.53□□□□□ -0.24
CHD3-203ENST00000380358 RASIP1Q5U651 963 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 ZNF507Q8TCN5 953 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 LRRC8CQ8TDW0 803 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 NLRP4Q96MN2 994 aa13.53□□□□□ -0.24
CHD3-203ENST00000380358 RAD17O75943 681 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 MRPL50Q8N5N7 158 aaKnown RBP13.52□□□□□ -0.24
CHD3-203ENST00000380358 RAB17Q9H0T7 212 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 NFE2L3Q9Y4A8 694 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.24
CHD3-203ENST00000380358 PYGLP06737 847 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 OAS2P29728 719 aaKnown RBP13.52□□□□□ -0.24
CHD3-203ENST00000380358 GLE1Q53GS7 698 aaKnown RBP13.52□□□□□ -0.24
CHD3-203ENST00000380358 TNNI3KQ59H18 835 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 DSTYKQ6XUX3 929 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 TEX2Q8IWB9 1127 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 SCYL3Q8IZE3 742 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 EDC3Q96F86 508 aaKnown RBP13.52□□□□□ -0.24
CHD3-203ENST00000380358 POLR3CQ9BUI4 534 aaPredicted RBP13.52□□□□□ -0.24
CHD3-203ENST00000380358 DBNDD1Q9H9R9 158 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 FPGT-TNNI3KV9GXZ4 949 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 PPIP5K1Q6PFW1 1433 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 HNRNPDLO14979 420 aaKnown RBP13.52□□□□□ -0.24
CHD3-203ENST00000380358 TRIM37O94972 964 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 CPP00450 1065 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 KRT10P13645 584 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 SLC16A2P36021 539 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 SCN4BQ8IWT1 228 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 TEKT3Q9BXF9 490 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 BCAP29Q9UHQ4 241 aa13.52□□□□□ -0.24
CHD3-203ENST00000380358 SH3TC1Q8TE82 1336 aa13.52□□□□□ -0.25
CHD3-203ENST00000380358 PRPF4O43172 522 aaKnown RBP eCLIP13.52□□□□□ -0.25
CHD3-203ENST00000380358 TBC1D12O60347 775 aa13.52□□□□□ -0.25
CHD3-203ENST00000380358 OSBPP22059 807 aa13.52□□□□□ -0.25
CHD3-203ENST00000380358 GCKP35557 465 aa13.52□□□□□ -0.25
CHD3-203ENST00000380358 TMED2Q15363 201 aa13.52□□□□□ -0.25
CHD3-203ENST00000380358 KCTD6Q8NC69 237 aa13.52□□□□□ -0.25
CHD3-203ENST00000380358 CFAP69A5D8W1 941 aa13.52□□□□□ -0.25
CHD3-203ENST00000380358 DARS2Q6PI48 645 aaKnown RBP13.52□□□□□ -0.25
CHD3-203ENST00000380358 C11orf74Q86VG3 221 aa13.52□□□□□ -0.25
CHD3-203ENST00000380358 CDKL2Q92772 493 aa13.52□□□□□ -0.25
CHD3-203ENST00000380358 SRPK1Q96SB4 655 aaKnown RBP13.52□□□□□ -0.25
CHD3-203ENST00000380358 DNAJC7Q99615 494 aa13.52□□□□□ -0.25
CHD3-203ENST00000380358 PMS1P54277 932 aaKnown RBP13.52□□□□□ -0.25
CHD3-203ENST00000380358 GNGT1P63211 74 aa13.52□□□□□ -0.25
CHD3-203ENST00000380358 MTERF2Q49AM1 385 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms