RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 RNF8O76064 485 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 ZAP70P43403 619 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 CDC37Q16543 378 aaPredicted RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 NELFCDQ8IXH7 590 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 CCDC124Q96CT7 223 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 TPX2Q9ULW0 747 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 TNNI1P19237 187 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 PTH1RQ03431 593 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 TADA2BQ86TJ2 420 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 NLRX1Q86UT6 975 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 SRRM1Q8IYB3 904 aaKnown RBP10.44□□□□□ -0.74
SNX1-202ENST00000380285 CHURC1Q8WUH1 139 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 TBX22Q9Y458 520 aa10.44□□□□□ -0.74
SNX1-202ENST00000380285 BUB1O43683 1085 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 SLFN14P0C7P3 912 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 FAM96AQ9H5X1 160 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 COPRSQ9NQ92 184 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 ABCB4P21439 1286 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 GUCY2CP25092 1073 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 MFAP3P55082 362 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 FKBP3Q00688 224 aaKnown RBP10.43□□□□□ -0.74
SNX1-202ENST00000380285 EHHADHQ08426 723 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 P2RX5Q93086 422 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 EPB41L5Q9HCM4 733 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 PCDHA5Q9Y5H7 936 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
SNX1-202ENST00000380285 PTGDRQ13258 359 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 CUL4BQ13620 913 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 LRRC23Q53EV4 343 aaPredicted RBP10.43□□□□□ -0.74
SNX1-202ENST00000380285 FAM178BQ8IXR5 827 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 AATFQ9NY61 560 aaKnown RBP eCLIP10.43□□□□□ -0.74
SNX1-202ENST00000380285 ERVV-2B6SEH9 535 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 MAPK13O15264 365 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 ZBED4O75132 1171 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 SERPING1P05155 500 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 NSFP46459 744 aaKnown RBP10.43□□□□□ -0.74
SNX1-202ENST00000380285 NNTQ13423 1086 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 NEK9Q8TD19 979 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 CCDC68Q9H2F9 335 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 PICK1Q9NRD5 415 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 AFG3L2Q9Y4W6 797 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 ORC6Q9Y5N6 252 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 PODXLO00592 558 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 IFNB1P01574 187 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 CD19P15391 556 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 TFAP4Q01664 338 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 ICE2Q659A1 982 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 TRIM50Q86XT4 487 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 MAGOHBQ96A72 148 aaKnown RBP10.43□□□□□ -0.74
SNX1-202ENST00000380285 FMO2Q99518 471 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 TBC1D7Q9P0N9 293 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.43□□□□□ -0.74
SNX1-202ENST00000380285 HGSO14964 777 aaPredicted RBP10.43□□□□□ -0.74
SNX1-202ENST00000380285 RBL2Q08999 1139 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 LRRC59Q96AG4 307 aaKnown RBP10.43□□□□□ -0.74
SNX1-202ENST00000380285 DDX25Q9UHL0 483 aaKnown RBP10.43□□□□□ -0.74
SNX1-202ENST00000380285 PLEKHG1Q9ULL1 1385 aa10.43□□□□□ -0.74
SNX1-202ENST00000380285 NOP56O00567 594 aaKnown RBP10.42□□□□□ -0.74
SNX1-202ENST00000380285 ECEL1O95672 775 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 CLEC17AQ6ZS10 378 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 ST13P4Q8IZP2 240 aaPredicted RBP10.42□□□□□ -0.74
SNX1-202ENST00000380285 CNBD1Q8NA66 436 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 RIOK1Q9BRS2 568 aaKnown RBP10.42□□□□□ -0.74
SNX1-202ENST00000380285 DPH5Q9H2P9 285 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 SAP30BPQ9UHR5 308 aaKnown RBP10.42□□□□□ -0.74
SNX1-202ENST00000380285 RASSF7Q02833 373 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 PTK2Q05397 1052 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 DRP2Q13474 957 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 PALD1Q9ULE6 856 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 RPAP1Q9BWH6 1393 aaPredicted RBP10.42□□□□□ -0.74
SNX1-202ENST00000380285 MYO1FO00160 1098 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 LRRC63Q05C16 580 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 TRIM6Q9C030 488 aaPredicted RBP10.42□□□□□ -0.74
SNX1-202ENST00000380285 CLIC4Q9Y696 253 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 ANO9A1A5B4 782 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 ATF7P17544 494 aaPredicted RBP10.42□□□□□ -0.74
SNX1-202ENST00000380285 MMEL1Q495T6 779 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 SCYL3Q8IZE3 742 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 LINC00301Q8NCQ3 95 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 ZNF608Q9ULD9 1512 aaPredicted RBP10.42□□□□□ -0.74
SNX1-202ENST00000380285 NDUFA10O95299 355 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 CTSWP56202 376 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 DMP1Q13316 513 aaPredicted RBP10.42□□□□□ -0.74
SNX1-202ENST00000380285 ZMYM1Q5SVZ6 1142 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 JDP2Q8WYK2 163 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 MYL10Q9BUA6 226 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 PSTPIP2Q9H939 334 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 PARP3Q9Y6F1 533 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 TAF5LO75529 589 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 PEX19P40855 299 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 ARL6IP4Q66PJ3 421 aaKnown RBP10.42□□□□□ -0.74
SNX1-202ENST00000380285 PACSIN2Q9UNF0 486 aaPredicted RBP10.42□□□□□ -0.74
SNX1-202ENST00000380285 LAMC1P11047 1609 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 TNNC2P02585 160 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 AFPP02771 609 aaKnown RBP10.42□□□□□ -0.74
SNX1-202ENST00000380285 SESN3P58005 492 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 CAV1Q03135 178 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 TAF11Q15544 211 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 GNPTABQ3T906 1256 aa10.42□□□□□ -0.74
SNX1-202ENST00000380285 MRPL47Q9HD33 250 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms