RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 V9GY48 417 aaPredicted RBP23.11■■□□□ 1.29
RER1-204ENST00000378518 HTTP42858 3142 aa23.11■■□□□ 1.29
RER1-204ENST00000378518 RPTORQ8N122 1335 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 SYNGAP1Q96PV0 1343 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 hCG_1642624A0A1W2PR95 340 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 ASB14A6NK59 587 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 CFBP00751 764 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 CCL5P13501 91 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 IFNAR1P17181 557 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 CYP2C19P33261 490 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 CACNB2Q08289 660 aaPredicted RBP23.1■■□□□ 1.29
RER1-204ENST00000378518 TRIM32Q13049 653 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 MTFR1Q15390 333 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 HEATR3Q7Z4Q2 680 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 TRIM22Q8IYM9 498 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 RNF26Q9BY78 433 aaPredicted RBP23.1■■□□□ 1.29
RER1-204ENST00000378518 RNF208Q9H0X6 261 aa23.1■■□□□ 1.29
RER1-204ENST00000378518 B4DLN1 442 aa23.09■■□□□ 1.29
RER1-204ENST00000378518 ST18O60284 1047 aa23.09■■□□□ 1.29
RER1-204ENST00000378518 PFKFB2O60825 505 aa23.09■■□□□ 1.29
RER1-204ENST00000378518 CDKL5O76039 1030 aa23.09■■□□□ 1.29
RER1-204ENST00000378518 MRPL12P52815 198 aaKnown RBP23.09■■□□□ 1.29
RER1-204ENST00000378518 MAP3K21Q5TCX8 1036 aa23.09■■□□□ 1.29
RER1-204ENST00000378518 MAMDC4Q6UXC1 1216 aa23.09■■□□□ 1.29
RER1-204ENST00000378518 UNC93B1Q9H1C4 597 aa23.09■■□□□ 1.29
RER1-204ENST00000378518 NRBP1Q9UHY1 535 aa23.09■■□□□ 1.29
RER1-204ENST00000378518 CNPY2Q9Y2B0 182 aa23.09■■□□□ 1.29
RER1-204ENST00000378518 LOC102724159A0A0B4J2E5 919 aa23.08■■□□□ 1.29
RER1-204ENST00000378518 SOWAHBA6NEL2 793 aa23.08■■□□□ 1.29
RER1-204ENST00000378518 GCOM1H8Y6P7 765 aaPredicted RBP23.08■■□□□ 1.29
RER1-204ENST00000378518 PRPF3O43395 683 aaKnown RBP23.08■■□□□ 1.29
RER1-204ENST00000378518 POLR2MP0CAP2 368 aa23.08■■□□□ 1.29
RER1-204ENST00000378518 GHRHRQ02643 423 aa23.08■■□□□ 1.29
RER1-204ENST00000378518 SCRN1Q12765 414 aa23.08■■□□□ 1.29
RER1-204ENST00000378518 PWP2Q15269 919 aaKnown RBP23.08■■□□□ 1.29
RER1-204ENST00000378518 NTRK3Q16288 839 aa23.08■■□□□ 1.29
RER1-204ENST00000378518 DNERQ8NFT8 737 aa23.08■■□□□ 1.29
RER1-204ENST00000378518 GPKOWQ92917 476 aaPredicted RBP eCLIP23.08■■□□□ 1.29
RER1-204ENST00000378518 CUL5Q93034 780 aa23.08■■□□□ 1.29
RER1-204ENST00000378518 PHKBQ93100 1093 aa23.08■■□□□ 1.29
RER1-204ENST00000378518 FGD4Q96M96 766 aa23.08■■□□□ 1.29
RER1-204ENST00000378518 SLC26A6Q9BXS9 759 aa23.08■■□□□ 1.29
RER1-204ENST00000378518 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.08■■□□□ 1.293e-15■■□□□ 14.4
RER1-204ENST00000378518 FRMPD3Q5JV73 1810 aa23.08■■□□□ 1.28
RER1-204ENST00000378518 IGHA2P01877 340 aa23.07■■□□□ 1.28
RER1-204ENST00000378518 ALDH5A1P51649 535 aaPredicted RBP23.07■■□□□ 1.28
RER1-204ENST00000378518 HSD17B4P51659 736 aa23.07■■□□□ 1.28
RER1-204ENST00000378518 NAPAP54920 295 aa23.07■■□□□ 1.28
RER1-204ENST00000378518 SSRP1Q08945 709 aaKnown RBP23.07■■□□□ 1.28
RER1-204ENST00000378518 PFKFB3Q16875 520 aaPredicted RBP23.07■■□□□ 1.28
RER1-204ENST00000378518 PPP1R18Q6NYC8 613 aa23.07■■□□□ 1.28
RER1-204ENST00000378518 ARMCX2Q7L311 632 aa23.07■■□□□ 1.28
RER1-204ENST00000378518 TBC1D5Q92609 795 aa23.07■■□□□ 1.28
RER1-204ENST00000378518 LIMCH1Q9UPQ0 1083 aa23.07■■□□□ 1.28
RER1-204ENST00000378518 LRRC37A2A6NM11 1700 aa23.07■■□□□ 1.28
RER1-204ENST00000378518 OPLAHO14841 1288 aa23.06■■□□□ 1.28
RER1-204ENST00000378518 CYBAP13498 195 aa23.06■■□□□ 1.28
RER1-204ENST00000378518 SCG2P13521 617 aa23.06■■□□□ 1.28
RER1-204ENST00000378518 CNGA1P29973 690 aa23.06■■□□□ 1.28
RER1-204ENST00000378518 ME3Q16798 604 aa23.06■■□□□ 1.28
RER1-204ENST00000378518 WWC2Q6AWC2 1192 aa23.06■■□□□ 1.28
RER1-204ENST00000378518 SYTL5Q8TDW5 730 aaPredicted RBP23.06■■□□□ 1.28
RER1-204ENST00000378518 SMARCC2Q8TAQ2 1214 aa23.05■■□□□ 1.28
RER1-204ENST00000378518 CCDC12Q8WUD4 166 aaPredicted RBP23.05■■□□□ 1.28
RER1-204ENST00000378518 GTF3C6Q969F1 213 aa23.05■■□□□ 1.28
RER1-204ENST00000378518 ZSCAN31Q96LW9 406 aaPredicted RBP23.05■■□□□ 1.28
RER1-204ENST00000378518 PURBQ96QR8 312 aaKnown RBP23.05■■□□□ 1.28
RER1-204ENST00000378518 ABHD16BQ9H3Z7 469 aa23.05■■□□□ 1.28
RER1-204ENST00000378518 PAK6Q9NQU5 681 aaPredicted RBP23.05■■□□□ 1.28
RER1-204ENST00000378518 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.05■■□□□ 1.28
RER1-204ENST00000378518 BARHL2Q9NY43 387 aa23.05■■□□□ 1.28
RER1-204ENST00000378518 MSCO60682 206 aa23.04■■□□□ 1.28
RER1-204ENST00000378518 GJB1P08034 283 aa23.04■■□□□ 1.28
RER1-204ENST00000378518 CCND3P30281 292 aaPredicted RBP23.04■■□□□ 1.28
RER1-204ENST00000378518 HOXA13P31271 388 aaPredicted RBP23.04■■□□□ 1.28
RER1-204ENST00000378518 NSUN6Q8TEA1 469 aaKnown RBP23.04■■□□□ 1.28
RER1-204ENST00000378518 PSTPIP2Q9H939 334 aa23.04■■□□□ 1.28
RER1-204ENST00000378518 ZHX1Q9UKY1 873 aaPredicted RBP23.04■■□□□ 1.28
RER1-204ENST00000378518 ASTN1O14525 1302 aa23.04■■□□□ 1.28
RER1-204ENST00000378518 STXBP3O00186 592 aa23.03■■□□□ 1.28
RER1-204ENST00000378518 DEXIO95424 95 aa23.03■■□□□ 1.28
RER1-204ENST00000378518 LARGE1O95461 756 aa23.03■■□□□ 1.28
RER1-204ENST00000378518 SNAI1O95863 264 aaPredicted RBP23.03■■□□□ 1.28
RER1-204ENST00000378518 PDE4DQ08499 809 aa23.03■■□□□ 1.28
RER1-204ENST00000378518 PRAMEF19Q5SWL8 479 aa23.03■■□□□ 1.28
RER1-204ENST00000378518 ARHGEF16Q5VV41 709 aa23.03■■□□□ 1.28
RER1-204ENST00000378518 TEX2Q8IWB9 1127 aa23.03■■□□□ 1.28
RER1-204ENST00000378518 DEFB118Q96PH6 123 aa23.03■■□□□ 1.28
RER1-204ENST00000378518 TAAR1Q96RJ0 339 aa23.03■■□□□ 1.28
RER1-204ENST00000378518 RMDN3Q96TC7 470 aa23.03■■□□□ 1.28
RER1-204ENST00000378518 GLT8D2Q9H1C3 349 aa23.03■■□□□ 1.28
RER1-204ENST00000378518 SH2B1Q9NRF2 756 aaPredicted RBP23.03■■□□□ 1.28
RER1-204ENST00000378518 PIK3CDO00329 1044 aa23.02■■□□□ 1.28
RER1-204ENST00000378518 PPFIA3O75145 1194 aa23.02■■□□□ 1.28
RER1-204ENST00000378518 CAPN2P17655 700 aa23.02■■□□□ 1.28
RER1-204ENST00000378518 SOX10P56693 466 aa23.02■■□□□ 1.28
RER1-204ENST00000378518 ACVR2BQ13705 512 aa23.02■■□□□ 1.28
RER1-204ENST00000378518 FCHSD1Q86WN1 690 aa23.02■■□□□ 1.28
RER1-204ENST00000378518 NECAB1Q8N987 351 aa23.02■■□□□ 1.28
RER1-204ENST00000378518 TRPV1Q8NER1 839 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms