RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 SMYD2Q9NRG4 433 aa18.8■□□□□ 0.6
MCF2L-203ENST00000375604 INO80B-WBP1J3KQ70 363 aa18.8■□□□□ 0.6
MCF2L-203ENST00000375604 CYP21A2P08686 494 aa18.8■□□□□ 0.6
MCF2L-203ENST00000375604 ARFGAP2Q8N6H7 521 aa18.8■□□□□ 0.6
MCF2L-203ENST00000375604 INO80BQ9C086 356 aaPredicted RBP18.8■□□□□ 0.6
MCF2L-203ENST00000375604 MYO5CQ9NQX4 1742 aa18.8■□□□□ 0.6
MCF2L-203ENST00000375604 CD2BP2O95400 341 aaKnown RBP18.8■□□□□ 0.6
MCF2L-203ENST00000375604 DYNLT1P63172 113 aa18.8■□□□□ 0.6
MCF2L-203ENST00000375604 FAM160B1Q5W0V3 765 aa18.8■□□□□ 0.6
MCF2L-203ENST00000375604 MESDQ14696 234 aa18.8■□□□□ 0.6
MCF2L-203ENST00000375604 RPS6KC1Q96S38 1066 aa18.8■□□□□ 0.6
MCF2L-203ENST00000375604 NBPF3Q9H094 633 aa18.8■□□□□ 0.6
MCF2L-203ENST00000375604 I3L4J1 428 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 CARMIL3Q8ND23 1372 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 OSBPP22059 807 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 FLAD1Q8NFF5 587 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 POLD4Q9HCU8 107 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 SAR1BQ9Y6B6 198 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 FMNL1O95466 1100 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-203ENST00000375604 RFX6Q8HWS3 928 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 NRBP2Q9NSY0 501 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 GOLGA8IPA6NC78 632 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 GOLGA8JA6NMD2 632 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 ADD2P35612 726 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 KRT71Q3SY84 523 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 NLRP10Q86W26 655 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 SEPT12Q8IYM1 358 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 RYBPQ8N488 228 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-203ENST00000375604 OSBP2Q969R2 916 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 TACC3Q9Y6A5 838 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 CTNNA1P35221 906 aaKnown RBP18.79■□□□□ 0.6
MCF2L-203ENST00000375604 CTTNQ14247 550 aaKnown RBP18.79■□□□□ 0.6
MCF2L-203ENST00000375604 ZMYM1Q5SVZ6 1142 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 SH3RF3Q8TEJ3 882 aaPredicted RBP18.79■□□□□ 0.6
MCF2L-203ENST00000375604 MAD1L1Q9Y6D9 718 aa18.79■□□□□ 0.6
MCF2L-203ENST00000375604 NOL3O60936 208 aaKnown RBP18.78■□□□□ 0.6
MCF2L-203ENST00000375604 CYP2D6P10635 497 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 TAOK1Q7L7X3 1001 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 CPVLQ9H3G5 476 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 PPP2R2CQ9Y2T4 447 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.78■□□□□ 0.6
MCF2L-203ENST00000375604 NPHP4O75161 1426 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-203ENST00000375604 MAGI3Q5TCQ9 1506 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 TXNDC9O14530 226 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 ZMYND10O75800 440 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 MCUR1Q96AQ8 359 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 KDM6BO15054 1643 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 TLR3O15455 904 aaKnown RBP18.78■□□□□ 0.6
MCF2L-203ENST00000375604 VSIG1Q86XK7 387 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 KMT5AQ9NQR1 393 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 DDIT3P35638 169 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 C7orf31Q8N865 590 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 SWAP70Q9UH65 585 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 ADGRL2O95490 1459 aa18.78■□□□□ 0.6
MCF2L-203ENST00000375604 SRGAP2CP0DJJ0 459 aa18.77■□□□□ 0.6
MCF2L-203ENST00000375604 YWHAEP62258 255 aaKnown RBP18.77■□□□□ 0.6
MCF2L-203ENST00000375604 SATB1Q01826 763 aa18.77■□□□□ 0.6
MCF2L-203ENST00000375604 PAK2Q13177 524 aa18.77■□□□□ 0.6
MCF2L-203ENST00000375604 ARHGEF25Q86VW2 580 aa18.77■□□□□ 0.6
MCF2L-203ENST00000375604 CD58P19256 250 aa18.77■□□□□ 0.6
MCF2L-203ENST00000375604 CASP14P31944 242 aa18.77■□□□□ 0.6
MCF2L-203ENST00000375604 STAT2P52630 851 aa18.77■□□□□ 0.6
MCF2L-203ENST00000375604 CCDC84Q86UT8 332 aaPredicted RBP18.77■□□□□ 0.6
MCF2L-203ENST00000375604 LARGE1O95461 756 aa18.77■□□□□ 0.6
MCF2L-203ENST00000375604 PPP1R12CQ9BZL4 782 aa18.77■□□□□ 0.6
MCF2L-203ENST00000375604 NLRP1Q9C000 1473 aa18.77■□□□□ 0.6
MCF2L-203ENST00000375604 GOLGA8SH3BPF8 625 aa18.77■□□□□ 0.6
MCF2L-203ENST00000375604 AMNQ9BXJ7 453 aa18.77■□□□□ 0.6
MCF2L-203ENST00000375604 H7C0C1 242 aa18.77■□□□□ 0.59
MCF2L-203ENST00000375604 GTPBP6O43824 516 aaPredicted RBP18.77■□□□□ 0.59
MCF2L-203ENST00000375604 CCND2P30279 289 aa18.77■□□□□ 0.59
MCF2L-203ENST00000375604 CXCR5P32302 372 aa18.77■□□□□ 0.59
MCF2L-203ENST00000375604 ATP5OP48047 213 aa18.77■□□□□ 0.59
MCF2L-203ENST00000375604 ZNF445P59923 1031 aa18.77■□□□□ 0.59
MCF2L-203ENST00000375604 COL4A3BPQ9Y5P4 624 aa18.77■□□□□ 0.59
MCF2L-203ENST00000375604 EHHADHQ08426 723 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 RBL2Q08999 1139 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 FAM26FQ5R3K3 315 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 MIS18BP1Q6P0N0 1132 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 OR8K1Q8NGG5 319 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 NXF1Q9UBU9 619 aaKnown RBP18.76■□□□□ 0.59
MCF2L-203ENST00000375604 RNASELQ05823 741 aaKnown RBP18.76■□□□□ 0.59
MCF2L-203ENST00000375604 HS1BP3Q53T59 392 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 TM6SF1Q9BZW5 370 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 MKRN1Q9UHC7 482 aaKnown RBP18.76■□□□□ 0.59
MCF2L-203ENST00000375604 IL6STP40189 918 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-203ENST00000375604 SYDE2Q5VT97 1194 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 CCDC170Q8IYT3 715 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 CEP170P1Q96L14 293 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 LEMD3Q9Y2U8 911 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 EXOC3L4Q17RC7 722 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 CCDC62Q6P9F0 684 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 ZNF668Q96K58 619 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-203ENST00000375604 TTC36A6NLP5 189 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 SGK1O00141 431 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 CMA1P23946 247 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 TFAMQ00059 246 aaKnown RBP18.76■□□□□ 0.59
MCF2L-203ENST00000375604 GJB4Q9NTQ9 266 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 ZSWIM5Q9P217 1185 aa18.76■□□□□ 0.59
MCF2L-203ENST00000375604 HESX1Q9UBX0 185 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms