RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 TBC1D22AQ8WUA7 517 aa12.1□□□□□ -0.47
CXCL12-203ENST00000374429 BCAS3Q9H6U6 928 aa12.1□□□□□ -0.47
CXCL12-203ENST00000374429 FBXO28Q9NVF7 368 aa12.1□□□□□ -0.47
CXCL12-203ENST00000374429 ATP6V0A2Q9Y487 856 aa12.1□□□□□ -0.47
CXCL12-203ENST00000374429 TRAF5O00463 557 aa12.1□□□□□ -0.47
CXCL12-203ENST00000374429 ALDH1B1P30837 517 aa12.1□□□□□ -0.47
CXCL12-203ENST00000374429 TMEM266Q2M3C6 531 aa12.1□□□□□ -0.47
CXCL12-203ENST00000374429 HERC4Q5GLZ8 1057 aaPredicted RBP12.1□□□□□ -0.47
CXCL12-203ENST00000374429 SPATA1Q5VX52 437 aa12.1□□□□□ -0.47
CXCL12-203ENST00000374429 PIGOQ8TEQ8 1089 aa12.1□□□□□ -0.47
CXCL12-203ENST00000374429 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.1□□□□□ -0.47
CXCL12-203ENST00000374429 PCDHA12Q9UN75 941 aa12.1□□□□□ -0.47
CXCL12-203ENST00000374429 LRP6O75581 1613 aa12.09□□□□□ -0.47
CXCL12-203ENST00000374429 USP54Q70EL1 1684 aa12.09□□□□□ -0.47
CXCL12-203ENST00000374429 PHACTR2O75167 634 aa12.09□□□□□ -0.47
CXCL12-203ENST00000374429 NEDD1Q8NHV4 660 aa12.09□□□□□ -0.47
CXCL12-203ENST00000374429 NOC4LQ9BVI4 516 aaKnown RBP12.09□□□□□ -0.47
CXCL12-203ENST00000374429 MRPL44Q9H9J2 332 aaKnown RBP12.09□□□□□ -0.47
CXCL12-203ENST00000374429 TMOD2Q9NZR1 351 aa12.09□□□□□ -0.47
CXCL12-203ENST00000374429 DDX25Q9UHL0 483 aaKnown RBP12.09□□□□□ -0.47
CXCL12-203ENST00000374429 SPEF2Q9C093 1822 aa12.09□□□□□ -0.47
CXCL12-203ENST00000374429 GLI3P10071 1580 aa12.09□□□□□ -0.47
CXCL12-203ENST00000374429 RXRBP28702 533 aa12.09□□□□□ -0.47
CXCL12-203ENST00000374429 PDE6BP35913 854 aa12.09□□□□□ -0.47
CXCL12-203ENST00000374429 CCDC40Q4G0X9 1142 aa12.09□□□□□ -0.47
CXCL12-203ENST00000374429 ACER1Q8TDN7 264 aa12.09□□□□□ -0.47
CXCL12-203ENST00000374429 TMEM39BQ9GZU3 492 aa12.09□□□□□ -0.47
CXCL12-203ENST00000374429 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.09□□□□□ -0.47
CXCL12-203ENST00000374429 LOC102724159A0A0B4J2E5 919 aa12.08□□□□□ -0.47
CXCL12-203ENST00000374429 POTEB3A0JP26 581 aa12.08□□□□□ -0.47
CXCL12-203ENST00000374429 POTECB2RU33 542 aa12.08□□□□□ -0.47
CXCL12-203ENST00000374429 IKBKBO14920 756 aa12.08□□□□□ -0.47
CXCL12-203ENST00000374429 IPO7O95373 1038 aaKnown RBP12.08□□□□□ -0.47
CXCL12-203ENST00000374429 SLU7O95391 586 aaKnown RBP12.08□□□□□ -0.47
CXCL12-203ENST00000374429 PWP2Q15269 919 aaKnown RBP12.08□□□□□ -0.47
CXCL12-203ENST00000374429 POTEBQ6S5H4 581 aa12.08□□□□□ -0.47
CXCL12-203ENST00000374429 KSR1Q8IVT5 923 aa12.08□□□□□ -0.47
CXCL12-203ENST00000374429 IKZF4Q9H2S9 585 aa12.08□□□□□ -0.47
CXCL12-203ENST00000374429 PHLPP1O60346 1717 aa12.08□□□□□ -0.47
CXCL12-203ENST00000374429 PPP1R3GB7ZBB8 358 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 SRGAP2O75044 1071 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 NPR1P16066 1061 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 SYCP1Q15431 976 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 ABCB5Q2M3G0 1257 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 QRICH1Q2TAL8 776 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 SBK1Q52WX2 424 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 C16orf86Q6ZW13 317 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 SV2BQ7L1I2 683 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 KRT26Q7Z3Y9 468 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 COA1Q9GZY4 146 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 JMJD4Q9H9V9 463 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 CTDP1Q9Y5B0 961 aaPredicted RBP12.08□□□□□ -0.48
CXCL12-203ENST00000374429 POTEFA5A3E0 1075 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 SPDYE3A6NKU9 549 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 F5H6K3 240 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 ZBTB39O15060 712 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 POTEIP0CG38 1075 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 KLRC3Q07444 240 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 POTEEQ6S8J3 1075 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 RAD9BQ6WBX8 426 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 KCNK18Q7Z418 384 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 CAGE1Q8TC20 777 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 ENOX1Q8TC92 643 aaKnown RBP12.08□□□□□ -0.48
CXCL12-203ENST00000374429 LRRC15Q8TF66 581 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 AGPAT5Q9NUQ2 364 aa12.08□□□□□ -0.48
CXCL12-203ENST00000374429 SEPT11Q9NVA2 429 aaKnown RBP12.08□□□□□ -0.48
CXCL12-203ENST00000374429 LAMA4Q16363 1823 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 COPB1P53618 953 aaKnown RBP12.07□□□□□ -0.48
CXCL12-203ENST00000374429 PPP2R5BQ15173 497 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 DCAF17Q5H9S7 520 aaPredicted RBP12.07□□□□□ -0.48
CXCL12-203ENST00000374429 APOBEC3HQ6NTF7 200 aaKnown RBP12.07□□□□□ -0.48
CXCL12-203ENST00000374429 EP400NLQ6ZTU2 488 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 CACNA2D4Q7Z3S7 1137 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 TPH2Q8IWU9 490 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 TC2NQ8N9U0 490 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 MASTLQ96GX5 879 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 OSBPL5Q9H0X9 879 aaPredicted RBP12.07□□□□□ -0.48
CXCL12-203ENST00000374429 NWD2Q9ULI1 1742 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 PALM3A6NDB9 673 aaPredicted RBP12.07□□□□□ -0.48
CXCL12-203ENST00000374429 ZSCAN12O43309 604 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 CXCR5P32302 372 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 CHMP4BP1P59074 171 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 TMED8Q6PL24 325 aaPredicted RBP12.07□□□□□ -0.48
CXCL12-203ENST00000374429 DLK2Q6UY11 383 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 SP8Q8IXZ3 490 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 RGL1Q9NZL6 768 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 HDAC6Q9UBN7 1215 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
CXCL12-203ENST00000374429 ETF1P62495 437 aaKnown RBP12.07□□□□□ -0.48
CXCL12-203ENST00000374429 LLGL1Q15334 1064 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 CDC37Q16543 378 aaPredicted RBP12.07□□□□□ -0.48
CXCL12-203ENST00000374429 ANKRD40Q6AI12 368 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 GSDMAQ96QA5 445 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 JADE2Q9NQC1 790 aa12.07□□□□□ -0.48
CXCL12-203ENST00000374429 LUC7L2Q9Y383 392 aaKnown RBP12.07□□□□□ -0.48
CXCL12-203ENST00000374429 CLIC2O15247 247 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 KIF5CO60282 957 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 CCDC175P0C221 793 aa12.06□□□□□ -0.48
CXCL12-203ENST00000374429 DLGAP5Q15398 846 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms