RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TRAPPC3LQ5T215 181 aa19.26■□□□□ 0.67
LDLRAP1-201ENST00000374338 CNBD1Q8NA66 436 aa19.26■□□□□ 0.67
LDLRAP1-201ENST00000374338 MLKLQ8NB16 471 aa19.26■□□□□ 0.67
LDLRAP1-201ENST00000374338 HPS3Q969F9 1004 aa19.26■□□□□ 0.67
LDLRAP1-201ENST00000374338 NYXQ9GZU5 481 aa19.26■□□□□ 0.67
LDLRAP1-201ENST00000374338 TAB2Q9NYJ8 693 aa19.26■□□□□ 0.67
LDLRAP1-201ENST00000374338 KLHL33A6NCF5 533 aa19.26■□□□□ 0.67
LDLRAP1-201ENST00000374338 MRPL12P52815 198 aaKnown RBP19.26■□□□□ 0.67
LDLRAP1-201ENST00000374338 GNGT1P63211 74 aa19.26■□□□□ 0.67
LDLRAP1-201ENST00000374338 IRX1P78414 480 aaPredicted RBP19.26■□□□□ 0.67
LDLRAP1-201ENST00000374338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.25■□□□□ 0.67
LDLRAP1-201ENST00000374338 MYO1BO43795 1136 aa19.25■□□□□ 0.67
LDLRAP1-201ENST00000374338 ZNF444Q8N0Y2 327 aaPredicted RBP19.25■□□□□ 0.67
LDLRAP1-201ENST00000374338 TRIM6Q9C030 488 aaPredicted RBP19.25■□□□□ 0.67
LDLRAP1-201ENST00000374338 FRMPD2Q68DX3 1309 aaPredicted RBP19.25■□□□□ 0.67
LDLRAP1-201ENST00000374338 ERVK-24P63145 666 aa19.25■□□□□ 0.67
LDLRAP1-201ENST00000374338 PFKFB3Q16875 520 aaPredicted RBP19.25■□□□□ 0.67
LDLRAP1-201ENST00000374338 C12orf60Q5U649 245 aa19.25■□□□□ 0.67
LDLRAP1-201ENST00000374338 ENOX1Q8TC92 643 aaKnown RBP19.25■□□□□ 0.67
LDLRAP1-201ENST00000374338 GJA10Q969M2 543 aa19.25■□□□□ 0.67
LDLRAP1-201ENST00000374338 NAPGQ99747 312 aaPredicted RBP19.25■□□□□ 0.67
LDLRAP1-201ENST00000374338 PPP1R3GB7ZBB8 358 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 BTDP43251 543 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 CCDC148Q8NFR7 591 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 LRRC15Q8TF66 581 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 ANKRD2Q9GZV1 360 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 ATP8A2Q9NTI2 1148 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 ATXN2Q99700 1313 aaKnown RBP19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 C6orf229H3BNL8 230 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 KIAA0754O94854 1291 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 TBC1D8BQ0IIM8 1120 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 BLIDQ8IZY5 108 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 CRACR2AQ9BSW2 395 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 KLC4Q9NSK0 619 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 MEFVO15553 781 aaPredicted RBP19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 RTN2O75298 545 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 GYPCP04921 128 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 ZNF579Q8NAF0 562 aaKnown RBP19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 MMS19Q96T76 1030 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 TMEM47Q9BQJ4 181 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 ARPP21Q9UBL0 812 aaPredicted RBP19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 MAD2L2Q9UI95 211 aa19.24■□□□□ 0.67
LDLRAP1-201ENST00000374338 TIAM2Q8IVF5 1701 aa19.23■□□□□ 0.67
LDLRAP1-201ENST00000374338 TMCO5BA8MYB1 307 aa19.23■□□□□ 0.67
LDLRAP1-201ENST00000374338 DDAH1O94760 285 aa19.23■□□□□ 0.67
LDLRAP1-201ENST00000374338 USP14P54578 494 aa19.23■□□□□ 0.67
LDLRAP1-201ENST00000374338 ATP2C1P98194 919 aaPredicted RBP19.23■□□□□ 0.67
LDLRAP1-201ENST00000374338 ACTN3Q08043 901 aaPredicted RBP19.23■□□□□ 0.67
LDLRAP1-201ENST00000374338 NT5DC1Q5TFE4 455 aa19.23■□□□□ 0.67
LDLRAP1-201ENST00000374338 B4GALNT4Q76KP1 1039 aa19.23■□□□□ 0.67
LDLRAP1-201ENST00000374338 NKRFO15226 690 aaKnown RBP eCLIP19.23■□□□□ 0.675e-7■□□□□ 11.3
LDLRAP1-201ENST00000374338 PMS1P54277 932 aaKnown RBP19.23■□□□□ 0.67
LDLRAP1-201ENST00000374338 LETM2Q2VYF4 491 aa19.23■□□□□ 0.67
LDLRAP1-201ENST00000374338 APTXQ7Z2E3 356 aaKnown RBP19.23■□□□□ 0.67
LDLRAP1-201ENST00000374338 MYO6Q9UM54 1294 aa19.23■□□□□ 0.67
LDLRAP1-201ENST00000374338 NID2Q14112 1375 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 ORC4O43929 436 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 RPGRQ92834 1020 aaKnown RBP19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 CHP1Q99653 195 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 CNTNAP4Q9C0A0 1308 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 A0A1B0GTH6 734 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 CCDC194A0A1B0GVG4 234 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 FGRP09769 529 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 CALM1P0DP23 149 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 CALM2P0DP24 149 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 CALM3P0DP25 149 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 ARHGAP25P42331 645 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 PRR5LQ6MZQ0 368 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 CALR3Q96L12 384 aaKnown RBP19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 TMEM260Q9NX78 707 aa19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 ZNF219Q9P2Y4 722 aaPredicted RBP19.22■□□□□ 0.67
LDLRAP1-201ENST00000374338 MFAP3LO75121 409 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 CCNHP51946 323 aaPredicted RBP19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 SH3GL2Q99962 352 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 BIN2Q9UBW5 565 aaPredicted RBP19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 KLRF2D3W0D1 207 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 NDUFAB1O14561 156 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 ZNF185O15231 689 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 STAT6P42226 847 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 SEMA3FQ13275 785 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 LRRC47Q8N1G4 583 aaKnown RBP19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 PANX2Q96RD6 677 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 N4BP3O15049 544 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 MFSD14BQ5SR56 506 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 SPATA20Q8TB22 786 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 PCDHA6Q9UN73 950 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 PCDHA8Q9Y5H6 950 aa19.21■□□□□ 0.67
LDLRAP1-201ENST00000374338 PRCPP42785 496 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 SCNN1DP51172 638 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 SMTNP53814 917 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 GRIK3Q13003 919 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 GRAPQ13588 217 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 CEP85LQ5SZL2 805 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 GRAPLQ8TC17 118 aaPredicted RBP19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 DDX20Q9UHI6 824 aaKnown RBP19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 RASSF9O75901 435 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 ATP1A1P05023 1023 aaKnown RBP19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 RASA1P20936 1047 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 AMPD2Q01433 879 aa19.2■□□□□ 0.66
LDLRAP1-201ENST00000374338 SPATA1Q5VX52 437 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms