RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 GTPBP4Q9BZE4 634 aaKnown RBP14.3□□□□□ -0.12
TSC22D3-206ENST00000372397 PSTPIP2Q9H939 334 aa14.3□□□□□ -0.12
TSC22D3-206ENST00000372397 MYH7BA7E2Y1 1941 aa14.3□□□□□ -0.12
TSC22D3-206ENST00000372397 N4BP3O15049 544 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 GDF11O95390 407 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 FXR2P51116 673 aaKnown RBP eCLIP14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 COPB1P53618 953 aaKnown RBP14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 SPAG1Q07617 926 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 SEMA3FQ13275 785 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 TMEM266Q2M3C6 531 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 SUPT20HQ8NEM7 779 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 TRIM9Q9C026 710 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 TAB2Q9NYJ8 693 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 ZSCAN12O43309 604 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 PMS1P54277 932 aaKnown RBP14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 ICA1Q05084 483 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 GRB10Q13322 594 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 STIM1Q13586 685 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 ABCB5Q2M3G0 1257 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 QRICH1Q2TAL8 776 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 CC2D2BQ6DHV5 1058 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 TMEM179Q6ZVK1 233 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 IRF2BP1Q8IU81 584 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 ANKRD20A12PQ8NF67 263 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 PANX2Q96RD6 677 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 PPP2R2CQ9Y2T4 447 aa14.29□□□□□ -0.12
TSC22D3-206ENST00000372397 TUBB4AP04350 444 aa14.28□□□□□ -0.12
TSC22D3-206ENST00000372397 ASIC1P78348 528 aa14.28□□□□□ -0.12
TSC22D3-206ENST00000372397 AMPD3Q01432 767 aa14.28□□□□□ -0.12
TSC22D3-206ENST00000372397 PDE4DQ08499 809 aa14.28□□□□□ -0.12
TSC22D3-206ENST00000372397 PDIA5Q14554 519 aa14.28□□□□□ -0.12
TSC22D3-206ENST00000372397 SYCP1Q15431 976 aa14.28□□□□□ -0.12
TSC22D3-206ENST00000372397 PPP4R3AQ6IN85 833 aa14.28□□□□□ -0.12
TSC22D3-206ENST00000372397 TOGARAM2Q6ZUX3 1019 aa14.28□□□□□ -0.12
TSC22D3-206ENST00000372397 CCDC47Q96A33 483 aaKnown RBP14.28□□□□□ -0.12
TSC22D3-206ENST00000372397 PNMA5Q96PV4 448 aa14.28□□□□□ -0.12
TSC22D3-206ENST00000372397 PDGFDQ9GZP0 370 aaPredicted RBP14.28□□□□□ -0.12
TSC22D3-206ENST00000372397 POTEMA6NI47 508 aa14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 F5H6K3 240 aa14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 PSMA7O14818 248 aa14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 ENTPD3O75355 529 aa14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 ZSCAN20P17040 1043 aaPredicted RBP14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 ETF1P62495 437 aaKnown RBP14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 JAG1P78504 1218 aa14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 KLRC3Q07444 240 aa14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 TRIM65Q6PJ69 517 aa14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 ANKRD7Q92527 254 aa14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 RAB34Q9BZG1 259 aa14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 BLOC1S4Q9NUP1 217 aa14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 EXOC1Q9NV70 894 aa14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 DDX25Q9UHL0 483 aaKnown RBP14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 ATF5Q9Y2D1 282 aaPredicted RBP14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 PCDHA1Q9Y5I3 950 aa14.27□□□□□ -0.12
TSC22D3-206ENST00000372397 ITIH6Q6UXX5 1313 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 USP17L15C9J2P7 530 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 USP17L13C9JLJ4 530 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 USP17L11C9JVI0 530 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 USP17L18D6R9N7 530 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 USP17L22D6RA61 530 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 USP17L17D6RBQ6 530 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 USP17L19D6RCP7 530 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 USP17L20D6RJB6 530 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 CASP14P31944 242 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 USP17L24Q0WX57 530 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 STK4Q13043 487 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 NAA30Q147X3 362 aaPredicted RBP14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 CDC37Q16543 378 aaPredicted RBP14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 USP17L6PQ6QN14 398 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 SV2BQ7L1I2 683 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 DHTKD1Q96HY7 919 aaPredicted RBP14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 CDK5RAP3Q96JB5 506 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 NUP88Q99567 741 aaPredicted RBP14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 NUDT12Q9BQG2 462 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 SRRTQ9BXP5 876 aaKnown RBP14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 DNAI1Q9UI46 699 aa14.27□□□□□ -0.13
TSC22D3-206ENST00000372397 MFAP3LO75121 409 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 GH2P01242 217 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 GYPCP04921 128 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 FXR1P51114 621 aaKnown RBP eCLIP14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 SNAP25P60880 206 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 NCBP1Q09161 790 aaKnown RBP14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 MCM6Q14566 821 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 RRP1BQ14684 758 aaKnown RBP14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 MTF1Q14872 753 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 TTI2Q6NXR4 508 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 PDCL2Q8N4E4 241 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 HAS1Q92839 578 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 GJA10Q969M2 543 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 TRIM47Q96LD4 638 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 CSRNP1Q96S65 589 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 ATRNL1Q5VV63 1379 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 ARFGEF1Q9Y6D6 1849 aa14.26□□□□□ -0.13
TSC22D3-206ENST00000372397 SOWAHDA6NJG2 315 aa14.25□□□□□ -0.13
TSC22D3-206ENST00000372397 MARCH6O60337 910 aa14.25□□□□□ -0.13
TSC22D3-206ENST00000372397 FCER1AP12319 257 aa14.25□□□□□ -0.13
TSC22D3-206ENST00000372397 UBXN1Q04323 297 aa14.25□□□□□ -0.13
TSC22D3-206ENST00000372397 RBM26Q5T8P6 1007 aaKnown RBP14.25□□□□□ -0.13
TSC22D3-206ENST00000372397 KRT79Q5XKE5 535 aa14.25□□□□□ -0.13
TSC22D3-206ENST00000372397 SNX29Q8TEQ0 813 aa14.25□□□□□ -0.13
TSC22D3-206ENST00000372397 DUSP9Q99956 384 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms