RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 RNF26Q9BY78 433 aaPredicted RBP10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 TMEM260Q9NX78 707 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 GOLGA6AQ9NYA3 693 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 CRB1P82279 1406 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 GTPBP6O43824 516 aaPredicted RBP10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 FTCDO95954 541 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 KRT19P08727 400 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 FBXO38Q6PIJ6 1188 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 NBPF11Q86T75 865 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 QTRT2Q9H974 415 aaKnown RBP10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 SUGCTQ9HAC7 445 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 ARHGEF10LQ9HCE6 1279 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 PPANQ9NQ55 473 aaKnown RBP10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 GOLGA6BA6NDN3 693 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 IFNB1P01574 187 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 SLFN14P0C7P3 912 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 TOGARAM2Q6ZUX3 1019 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 ZNF354CQ86Y25 554 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 PAGE5Q96GU1 130 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 CSRNP1Q96S65 589 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 CCDC172P0C7W6 258 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 CYP19A1P11511 503 aaPredicted RBP10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 HSPA1LP34931 641 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 SHC4Q6S5L8 630 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 MB21D2Q8IYB1 491 aaPredicted RBP10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 FMR1NBQ8N0W7 255 aaPredicted RBP10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 PPM1KQ8N3J5 372 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 CDCA7Q9BWT1 371 aaPredicted RBP10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 FOXP1Q9H334 677 aaPredicted RBP10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 ATP8A2Q9NTI2 1148 aa10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 ARMCX3Q9UH62 379 aaPredicted RBP10.06□□□□□ -0.8
SMARCA1-202ENST00000371122 TNNI1P19237 187 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 TNNC1P63316 161 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 RPS6KA1Q15418 735 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 MXD3Q9BW11 206 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 ASIC3Q9UHC3 531 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 SERPINB13Q9UIV8 391 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 IKBKGQ9Y6K9 419 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 AK9Q5TCS8 1911 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 ZNF609O15014 1411 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 OPA1O60313 960 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 XRCC5P13010 732 aaKnown RBP10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 FAM102BQ5T8I3 360 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 PROCA1Q8NCQ7 364 aaPredicted RBP10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 PPP1R14CQ8TAE6 165 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 PIGOQ8TEQ8 1089 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 PPP1R16BQ96T49 567 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 LY9Q9HBG7 655 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 ATP10DQ9P241 1426 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 WTIPA6NIX2 430 aaPredicted RBP10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 USP17L5A8MUK1 530 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 PDIA6Q15084 440 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 GSPT2Q8IYD1 628 aaKnown RBP10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 AFAP1L1Q8TED9 768 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 ST7Q9NRC1 585 aa10.05□□□□□ -0.8
SMARCA1-202ENST00000371122 PALLDQ8WX93 1383 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 FBXO11Q86XK2 927 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 CCDC63Q8NA47 563 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 RPAP1Q9BWH6 1393 aaPredicted RBP10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 NR2F2P24468 414 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 CDK8P49336 464 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 DNM2P50570 870 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 GUCY2DQ02846 1103 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 CALCOCO2Q13137 446 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 PPP2R5BQ15173 497 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 CCDC84Q86UT8 332 aaPredicted RBP10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 PLA2G4DQ86XP0 818 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 FAM178BQ8IXR5 827 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 CCDC105Q8IYK2 499 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 GIMAP7Q8NHV1 300 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 ZNF668Q96K58 619 aaPredicted RBP10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 KCNF1Q9H3M0 494 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 ADAMTS1Q9UHI8 967 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 H7C1D1 291 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 PPP6R2O75170 966 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 EZRP15311 586 aaKnown RBP10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 DESP17661 470 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 KRT31Q15323 416 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 KRT71Q3SY84 523 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 KMT5BQ4FZB7 885 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 LMBR1Q8WVP7 490 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 LARP4BQ92615 738 aaKnown RBP10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 DCP1AQ9NPI6 582 aaPredicted RBP10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 TFR2Q9UP52 801 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 GLI3P10071 1580 aa10.04□□□□□ -0.8
SMARCA1-202ENST00000371122 FLOT1O75955 427 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 PRPF6O94906 941 aaKnown RBP10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 MOCS3O95396 460 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 LIFRP42702 1097 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 CLCN6P51797 869 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 ZBTB16Q05516 673 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 C2orf54Q08AI8 447 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 XKR9Q5GH70 373 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 ODR4Q5SWX8 454 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 BSPRYQ5W0U4 402 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 FAM133AQ8N9E0 248 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 TBC1D22AQ8WUA7 517 aa10.03□□□□□ -0.8
SMARCA1-202ENST00000371122 GSDMAQ96QA5 445 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms