RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CYP27A1Q02318 531 aa12.88□□□□□ -0.35
COPA-202ENST00000368069 ASPRV1Q53RT3 343 aa12.88□□□□□ -0.35
COPA-202ENST00000368069 WDR44Q5JSH3 913 aa12.88□□□□□ -0.35
COPA-202ENST00000368069 GBP6Q6ZN66 633 aa12.88□□□□□ -0.35
COPA-202ENST00000368069 HARSP12081 509 aaKnown RBP12.88□□□□□ -0.35
COPA-202ENST00000368069 CYP4A11Q02928 519 aa12.88□□□□□ -0.35
COPA-202ENST00000368069 EHHADHQ08426 723 aa12.88□□□□□ -0.35
COPA-202ENST00000368069 MB21D1Q8N884 522 aa12.88□□□□□ -0.35
COPA-202ENST00000368069 GOLGA5Q8TBA6 731 aa12.88□□□□□ -0.35
COPA-202ENST00000368069 NHEJ1Q9H9Q4 299 aaPredicted RBP12.88□□□□□ -0.35
COPA-202ENST00000368069 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.88□□□□□ -0.35
COPA-202ENST00000368069 MYCLP12524 364 aaPredicted RBP12.87□□□□□ -0.35
COPA-202ENST00000368069 PRDX5P30044 214 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 NF2P35240 595 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 RCAN1P53805 252 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 MTMR3Q13615 1198 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 CEP85LQ5SZL2 805 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 SLFN13Q68D06 897 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 POTEDQ86YR6 584 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 CPXCR1Q8N123 301 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 PPM1EQ8WY54 764 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 HOMER2Q9NSB8 354 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 SRP68Q9UHB9 627 aaKnown RBP12.87□□□□□ -0.35
COPA-202ENST00000368069 USP21Q9UK80 565 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 GOLGA8KD6RF30 607 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 KRIT1O00522 736 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 TEX33O43247 280 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 ATP1A2P50993 1020 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 CACNB1Q02641 598 aaPredicted RBP12.87□□□□□ -0.35
COPA-202ENST00000368069 CERKLQ49MI3 558 aaPredicted RBP12.87□□□□□ -0.35
COPA-202ENST00000368069 DGKHQ86XP1 1220 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 KIFC2Q96AC6 838 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 MTA3Q9BTC8 594 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 TRIM49BA6NDI0 452 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 ICA1Q05084 483 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 PFKFB3Q16875 520 aaPredicted RBP12.87□□□□□ -0.35
COPA-202ENST00000368069 FBXO11Q86XK2 927 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 KIAA0825Q8IV33 1275 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 SMCR8Q8TEV9 937 aaPredicted RBP12.87□□□□□ -0.35
COPA-202ENST00000368069 IQCGQ9H095 443 aaKnown RBP12.87□□□□□ -0.35
COPA-202ENST00000368069 STK17AQ9UEE5 414 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 EXOC7Q9UPT5 735 aa12.87□□□□□ -0.35
COPA-202ENST00000368069 GUCY2DQ02846 1103 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 C2orf54Q08AI8 447 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 E7EVH7 732 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 CTNNA1P35221 906 aaKnown RBP12.86□□□□□ -0.35
COPA-202ENST00000368069 SLC16A2P36021 539 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 PLA2G12BQ9BX93 195 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 ABCB6Q9NP58 842 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 SHPRHQ149N8 1683 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 C1orf167Q5SNV9 1468 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 H2AFZP0C0S5 128 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 EIF4A3P38919 411 aaKnown RBP12.86□□□□□ -0.35
COPA-202ENST00000368069 TERF2Q15554 542 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 E4F1Q66K89 784 aaPredicted RBP12.86□□□□□ -0.35
COPA-202ENST00000368069 KCTD1Q719H9 257 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 H2AFVQ71UI9 128 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 DPH6Q7L8W6 267 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 CCDC170Q8IYT3 715 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 GJA10Q969M2 543 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 CAPS2Q9BXY5 557 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 ABHD10Q9NUJ1 306 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 ASIC3Q9UHC3 531 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 FKBP3Q00688 224 aaKnown RBP12.86□□□□□ -0.35
COPA-202ENST00000368069 PABPC4Q13310 644 aaKnown RBP eCLIP12.86□□□□□ -0.351e-7■■■□□ 15.2
COPA-202ENST00000368069 CCDC105Q8IYK2 499 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 NKIRAS1Q9NYS0 192 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 SWAP70Q9UH65 585 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 FBXO2Q9UK22 296 aaPredicted RBP12.86□□□□□ -0.35
COPA-202ENST00000368069 MINPP1Q9UNW1 487 aa12.86□□□□□ -0.35
COPA-202ENST00000368069 MOCS3O95396 460 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 TTLL1O95922 423 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 NR2F2P24468 414 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 CXCR5P32302 372 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 EXOC3L4Q17RC7 722 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 GPATCH4Q5T3I0 446 aaKnown RBP12.85□□□□□ -0.35
COPA-202ENST00000368069 PPP1R14CQ8TAE6 165 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 RIC8AQ9NPQ8 531 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 CEP83Q9Y592 693 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 COL4A3BPQ9Y5P4 624 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 RNF40O75150 1001 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 IGDCC4Q8TDY8 1250 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 CABS1Q96KC9 395 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 MPHOSPH6Q99547 160 aaKnown RBP12.85□□□□□ -0.35
COPA-202ENST00000368069 METTL14Q9HCE5 456 aaKnown RBP12.85□□□□□ -0.35
COPA-202ENST00000368069 SH3GLB2Q9NR46 395 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 ALDH1B1P30837 517 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 MCTP2Q6DN12 878 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 ZNF365Q70YC5 407 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 BCAS4Q8TDM0 211 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 GPR101Q96P66 508 aaPredicted RBP12.85□□□□□ -0.35
COPA-202ENST00000368069 KRT12Q99456 494 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 RAB17Q9H0T7 212 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 EPC1Q9H2F5 836 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 DCP1AQ9NPI6 582 aaPredicted RBP12.85□□□□□ -0.35
COPA-202ENST00000368069 PPANQ9NQ55 473 aaKnown RBP12.85□□□□□ -0.35
COPA-202ENST00000368069 MROH7-TTC4A0A0A0MT08 1334 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 ZNF335Q9H4Z2 1342 aaPredicted RBP12.85□□□□□ -0.35
COPA-202ENST00000368069 CDK8P49336 464 aa12.85□□□□□ -0.35
COPA-202ENST00000368069 CLEC4GQ6UXB4 293 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms