RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 TMTC4Q5T4D3 741 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 NOC2LQ9Y3T9 749 aaKnown RBP22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 MYL7Q01449 175 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 RPS6KA2Q15349 733 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 HLFQ16534 295 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 A6NJR5 290 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 GOLGA8SH3BPF8 625 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 H7C0C1 242 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 ATP5OP48047 213 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 MLKLQ8NB16 471 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
CDC42BPB-201ENST00000361246 U2AF2P26368 475 aaKnown RBP eCLIP22.23■■□□□ 1.156e-6■■■■□ 24.4
CDC42BPB-201ENST00000361246 SRGAP1Q7Z6B7 1085 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 MYLK4Q86YV6 388 aaPredicted RBP22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 RFX6Q8HWS3 928 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 ARHGEF2Q92974 986 aaKnown RBP22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 SNAP23O00161 211 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 IL6STP40189 918 aaPredicted RBP22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 CASP2P42575 452 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 ADALQ6DHV7 355 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 KRT26Q7Z3Y9 468 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 SMYD4Q8IYR2 804 aaPredicted RBP22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 ZHX2Q9Y6X8 837 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 LRRN2O75325 713 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 DYNLT1P63172 113 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 R3HDM1Q15032 1099 aaKnown RBP22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 AFAP1L2Q8N4X5 818 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 PALLDQ8WX93 1383 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 DYNC1I1O14576 645 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 ATP5DP30049 168 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 ADD3Q9UEY8 706 aaKnown RBP22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 TYW5A2RUC4 315 aaKnown RBP22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 WRNIP1Q96S55 665 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 GOLGA8IPA6NC78 632 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 GOLGA8JA6NMD2 632 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 SWAP70Q9UH65 585 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 AMFRQ9UKV5 643 aa22.23■■□□□ 1.15
CDC42BPB-201ENST00000361246 GCC2Q8IWJ2 1684 aa22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 SFI1A8K8P3 1242 aa22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 ADCY8P40145 1251 aa22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 SLFNL1Q499Z3 407 aa22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 SH3RF3Q8TEJ3 882 aaPredicted RBP22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 DESI2Q9BSY9 194 aa22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 RAVER2Q9HCJ3 691 aaKnown RBP22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 DDIT3P35638 169 aa22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 CDC25AP30304 524 aa22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 HADHQ16836 314 aaKnown RBP22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 STMN2Q93045 179 aa22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 RPN1P04843 607 aaKnown RBP22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 ELF1P32519 619 aa22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 SLC7A3Q8WY07 619 aa22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 NOL3O60936 208 aaKnown RBP22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 TBC1D9BQ66K14 1250 aa22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 OTUD5Q96G74 571 aa22.22■■□□□ 1.15
CDC42BPB-201ENST00000361246 SYNE4Q8N205 404 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 MASTLQ96GX5 879 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 PRIMPOLQ96LW4 560 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 NUCKS1Q9H1E3 243 aaKnown RBP22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 ADCY9O60503 1353 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 SEMA3EO15041 775 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 NLRP10Q86W26 655 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 MCUQ8NE86 351 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 ECE2O60344 883 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 DPH5Q9H2P9 285 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 BBOX1O75936 387 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 GBP6Q6ZN66 633 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 TRIM56Q9BRZ2 755 aaKnown RBP22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 LMCD1Q9NZU5 365 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 ANAPC5Q9UJX4 755 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 SNX1Q13596 522 aa22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 ARMCX3Q9UH62 379 aaPredicted RBP22.21■■□□□ 1.15
CDC42BPB-201ENST00000361246 RTKN2Q8IZC4 609 aa22.2■■□□□ 1.15
CDC42BPB-201ENST00000361246 CCNYQ8ND76 341 aa22.2■■□□□ 1.15
CDC42BPB-201ENST00000361246 OLA1Q9NTK5 396 aaKnown RBP22.2■■□□□ 1.15
CDC42BPB-201ENST00000361246 CTTNQ14247 550 aaKnown RBP22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 SLC38A10Q9HBR0 1119 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 SCRN1Q12765 414 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 RIPOR2Q9Y4F9 1068 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 GH2P01242 217 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 PDXDC2PQ6P474 469 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 TBCKQ8TEA7 893 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 CHAMP1Q96JM3 812 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 IWS1Q96ST2 819 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 SERPINB13Q9UIV8 391 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 FIS1Q9Y3D6 152 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 I3L4J1 428 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 ECE1P42892 770 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 SYCE1Q8N0S2 351 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 PLXNC1O60486 1568 aa22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 ZNF215Q9UL58 517 aaPredicted RBP22.2■■□□□ 1.14
CDC42BPB-201ENST00000361246 PZPP20742 1482 aa22.19■■□□□ 1.14
CDC42BPB-201ENST00000361246 SH2D4BQ5SQS7 431 aa22.19■■□□□ 1.14
CDC42BPB-201ENST00000361246 CHRNA5P30532 468 aa22.19■■□□□ 1.14
CDC42BPB-201ENST00000361246 GOLGA8FQ08AF8 430 aa22.19■■□□□ 1.14
CDC42BPB-201ENST00000361246 GOLGA8DPQ0D2H9 430 aa22.19■■□□□ 1.14
CDC42BPB-201ENST00000361246 FAM83BQ5T0W9 1011 aa22.19■■□□□ 1.14
CDC42BPB-201ENST00000361246 DSTYKQ6XUX3 929 aa22.19■■□□□ 1.14
CDC42BPB-201ENST00000361246 HDXQ7Z353 690 aa22.19■■□□□ 1.14
CDC42BPB-201ENST00000361246 IFT20Q8IY31 132 aa22.19■■□□□ 1.14
CDC42BPB-201ENST00000361246 A0A087WWV3 80 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms