RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 KRT40Q6A162 431 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 TPTE2Q6XPS3 522 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 ENAHQ8N8S7 591 aaPredicted RBP6.49□□□□□ -1.37
CD47-201ENST00000355354 FAM200AQ8TCP9 573 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 GBP4Q96PP9 640 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 PACSIN1Q9BY11 444 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 PAXBP1Q9Y5B6 917 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 AOC2O75106 756 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 HOXD13P35453 343 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 L1TD1Q5T7N2 865 aaKnown RBP6.49□□□□□ -1.37
CD47-201ENST00000355354 DPY19L2P1Q6NXN4 242 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 PNPLA1Q8N8W4 532 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 RGS22Q8NE09 1264 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 TDRD7Q8NHU6 1098 aaKnown RBP6.49□□□□□ -1.37
CD47-201ENST00000355354 OTUD5Q96G74 571 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 REC8O95072 547 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 ITGA6P23229 1130 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 IGFBP6P24592 240 aaPredicted RBP6.49□□□□□ -1.37
CD47-201ENST00000355354 CTCFP49711 727 aaPredicted RBP6.49□□□□□ -1.37
CD47-201ENST00000355354 MNX1P50219 401 aaPredicted RBP6.49□□□□□ -1.37
CD47-201ENST00000355354 CCDC183Q5T5S1 534 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 TNFRSF25Q93038 417 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 RIOK1Q9BRS2 568 aaKnown RBP6.49□□□□□ -1.37
CD47-201ENST00000355354 CSRNP2Q9H175 543 aa6.49□□□□□ -1.37
CD47-201ENST00000355354 PSMD14O00487 310 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 ST18O60284 1047 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 FGFR2P21802 821 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 GMPSP49915 693 aaPredicted RBP6.48□□□□□ -1.37
CD47-201ENST00000355354 SART3Q15020 963 aaKnown RBP6.48□□□□□ -1.37
CD47-201ENST00000355354 SEC23AQ15436 765 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 DIAPH3Q9NSV4 1193 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 PCNX1Q96RV3 2341 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 PRC1O43663 620 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 WNT7BP56706 349 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 MAP1SQ66K74 1059 aaPredicted RBP6.48□□□□□ -1.37
CD47-201ENST00000355354 TMC6Q7Z403 805 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 TRIM7Q9C029 511 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 TMEM260Q9NX78 707 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 CCDC39Q9UFE4 941 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 KIAA1217Q5T5P2 1943 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 KRT14P02533 472 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 DNA2P51530 1060 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 BICD2Q8TD16 824 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 UBA5Q9GZZ9 404 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 NEUROG2Q9H2A3 272 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 CLSTN2Q9H4D0 955 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 ACTN4O43707 911 aaKnown RBP6.48□□□□□ -1.37
CD47-201ENST00000355354 F7P08709 466 aaPredicted RBP6.48□□□□□ -1.37
CD47-201ENST00000355354 IBSPP21815 317 aaPredicted RBP6.48□□□□□ -1.37
CD47-201ENST00000355354 LBX1P52954 281 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 NUCB2P80303 420 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 DNTTIP2Q5QJE6 756 aaKnown RBP6.48□□□□□ -1.37
CD47-201ENST00000355354 ANKLE1Q8NAG6 615 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 AGBL3Q8NEM8 1001 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 PTPN18Q99952 460 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 DNAJC18Q9H819 358 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 CYP46A1Q9Y6A2 500 aa6.48□□□□□ -1.37
CD47-201ENST00000355354 DCAF8L1A6NGE4 600 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 TADA3O75528 432 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 PSMC6P62333 389 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 TTBK2Q6IQ55 1244 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 SIAH1Q8IUQ4 282 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 CAPNS2Q96L46 248 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 CRACR2AQ9BSW2 395 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 TNMDQ9H2S6 317 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 DDX4Q9NQI0 724 aaKnown RBP6.47□□□□□ -1.37
CD47-201ENST00000355354 ORC3Q9UBD5 711 aaPredicted RBP6.47□□□□□ -1.37
CD47-201ENST00000355354 FBXO2Q9UK22 296 aaPredicted RBP6.47□□□□□ -1.37
CD47-201ENST00000355354 C4orf32Q8N8J7 132 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 ZNHIT6Q9NWK9 470 aaKnown RBP6.47□□□□□ -1.37
CD47-201ENST00000355354 NPHP3-ACAD11A0A0J9YXS1 232 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 LRRC41Q15345 812 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 TET1Q8NFU7 2136 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 Q3C1V9 767 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 OR2W6PQ8NHA6 318 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 LRRN4Q8WUT4 740 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 ARL8AQ96BM9 186 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 GLIS2Q9BZE0 524 aaPredicted RBP6.47□□□□□ -1.37
CD47-201ENST00000355354 NUP62CLQ9H1M0 184 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 L2HGDHQ9H9P8 463 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 RNF186Q9NXI6 227 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 WRAP73Q9P2S5 460 aaPredicted RBP6.47□□□□□ -1.37
CD47-201ENST00000355354 ABCF2Q9UG63 623 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 NFE2L3Q9Y4A8 694 aa6.47□□□□□ -1.37
CD47-201ENST00000355354 KMT2EQ8IZD2 1858 aa6.46□□□□□ -1.37
CD47-201ENST00000355354 AKAP9Q99996 3911 aa6.46□□□□□ -1.37
CD47-201ENST00000355354 ZFHX2Q9C0A1 2572 aaPredicted RBP6.46□□□□□ -1.37
CD47-201ENST00000355354 MBD4O95243 580 aa6.46□□□□□ -1.37
CD47-201ENST00000355354 ERFP50548 548 aa6.46□□□□□ -1.37
CD47-201ENST00000355354 DNAJC21Q5F1R6 531 aaKnown RBP6.46□□□□□ -1.37
CD47-201ENST00000355354 KCNV1Q6PIU1 500 aa6.46□□□□□ -1.37
CD47-201ENST00000355354 LDHAL6AQ6ZMR3 332 aa6.46□□□□□ -1.37
CD47-201ENST00000355354 NBPF5PQ86XG9 351 aaPredicted RBP6.46□□□□□ -1.37
CD47-201ENST00000355354 MTMR8Q96EF0 704 aa6.46□□□□□ -1.37
CD47-201ENST00000355354 RNF19AQ9NV58 838 aa6.46□□□□□ -1.37
CD47-201ENST00000355354 BSDC1Q9NW68 430 aaPredicted RBP6.46□□□□□ -1.37
CD47-201ENST00000355354 ZNF112Q9UJU3 913 aa6.46□□□□□ -1.37
CD47-201ENST00000355354 ZNF652Q9Y2D9 606 aa6.46□□□□□ -1.37
CD47-201ENST00000355354 PFKFB2O60825 505 aa6.46□□□□□ -1.38
CD47-201ENST00000355354 FKBP1BP68106 108 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms