RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 IQCDQ96DY2 449 aa27.37■■□□□ 1.97
CPNE1-202ENST00000352393 KIAA0895Q8NCT3 520 aa27.36■■□□□ 1.97
CPNE1-202ENST00000352393 MMTAG2Q9BU76 263 aaKnown RBP27.36■■□□□ 1.97
CPNE1-202ENST00000352393 FEZ2Q9UHY8 353 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-202ENST00000352393 NUTM2BA6NNL0 878 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-202ENST00000352393 NUTM2EB1AL46 878 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-202ENST00000352393 PDE2AO00408 941 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-202ENST00000352393 ZNF263O14978 683 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 CCNT1O60563 726 aaKnown RBP27.35■■□□□ 1.97
CPNE1-202ENST00000352393 SYF2O95926 243 aaKnown RBP27.35■■□□□ 1.97
CPNE1-202ENST00000352393 IVLP07476 585 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 RASA1P20936 1047 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 HNRNPH3P31942 346 aaKnown RBP27.35■■□□□ 1.97
CPNE1-202ENST00000352393 NAPAP54920 295 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 LETM2Q2VYF4 491 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 TSGA10Q9BZW7 698 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 DUSP10Q9Y6W6 482 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 TNRC6CQ9HCJ0 1690 aaKnown RBP27.35■■□□□ 1.97
CPNE1-202ENST00000352393 KLRF2D3W0D1 207 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 NKRFO15226 690 aaKnown RBP eCLIP27.35■■□□□ 1.97
CPNE1-202ENST00000352393 PHACTR2O75167 634 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 LDHBP07195 334 aaKnown RBP27.35■■□□□ 1.97
CPNE1-202ENST00000352393 GOLGA8HP0CJ92 632 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 AMOTL1Q8IY63 956 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 ZNF444Q8N0Y2 327 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-202ENST00000352393 COG1Q8WTW3 980 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 PCMTD1Q96MG8 357 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-202ENST00000352393 FAM204AQ9H8W3 233 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 STX8Q9UNK0 236 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 MTMR7Q9Y216 660 aa27.35■■□□□ 1.97
CPNE1-202ENST00000352393 RNF40O75150 1001 aa27.34■■□□□ 1.97
CPNE1-202ENST00000352393 PRPF6O94906 941 aaKnown RBP27.34■■□□□ 1.97
CPNE1-202ENST00000352393 IDEP14735 1019 aa27.34■■□□□ 1.97
CPNE1-202ENST00000352393 CYP27A1Q02318 531 aa27.34■■□□□ 1.97
CPNE1-202ENST00000352393 FKBP15Q5T1M5 1219 aa27.34■■□□□ 1.97
CPNE1-202ENST00000352393 CNNM4Q6P4Q7 775 aa27.34■■□□□ 1.97
CPNE1-202ENST00000352393 NEK8Q86SG6 692 aa27.34■■□□□ 1.97
CPNE1-202ENST00000352393 FNBP4Q8N3X1 1017 aaPredicted RBP27.34■■□□□ 1.97
CPNE1-202ENST00000352393 SECISBP2LQ93073 1101 aaKnown RBP27.34■■□□□ 1.97
CPNE1-202ENST00000352393 ZNF185O15231 689 aa27.34■■□□□ 1.97
CPNE1-202ENST00000352393 TNNT3P45378 269 aaPredicted RBP27.34■■□□□ 1.97
CPNE1-202ENST00000352393 AMPD3Q01432 767 aa27.34■■□□□ 1.97
CPNE1-202ENST00000352393 KIF5AQ12840 1032 aa27.34■■□□□ 1.97
CPNE1-202ENST00000352393 WDR66Q8TBY9 1149 aa27.34■■□□□ 1.97
CPNE1-202ENST00000352393 CAGE1Q8TC20 777 aa27.34■■□□□ 1.97
CPNE1-202ENST00000352393 SEMA6BQ9H3T3 888 aa27.34■■□□□ 1.97
CPNE1-202ENST00000352393 PPP4CP60510 307 aa27.33■■□□□ 1.97
CPNE1-202ENST00000352393 SPATA31A5Q5VU36 1347 aa27.33■■□□□ 1.97
CPNE1-202ENST00000352393 SPATA31A7Q8IWB4 1347 aa27.33■■□□□ 1.97
CPNE1-202ENST00000352393 MACROD2A1Z1Q3 448 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 ORC2Q13416 577 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-202ENST00000352393 CENPPQ6IPU0 288 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 NBPF5PQ86XG9 351 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-202ENST00000352393 CPVLQ9H3G5 476 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 C6orf50Q9HD87 102 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 LRWD1Q9UFC0 647 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 PLAGL2Q9UPG8 496 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 SIK3Q9Y2K2 1263 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 TM4SF1P30408 202 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 DIXDC1Q155Q3 683 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 IQCEQ6IPM2 695 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 SMIM5Q71RC9 77 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 SRLQ86TD4 932 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 LCMT1Q9UIC8 334 aa27.32■■□□□ 1.96
CPNE1-202ENST00000352393 SMCO2A6NFE2 343 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 GNA11P29992 359 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 TECP42680 631 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 GSTO1P78417 241 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 ZNF572Q7Z3I7 529 aaPredicted RBP27.31■■□□□ 1.96
CPNE1-202ENST00000352393 TGFBRAP1Q8WUH2 860 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 CCDC42Q96M95 316 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 SETDB2Q96T68 719 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 NARFQ9UHQ1 456 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 BAG3O95817 575 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 PLEKP08567 350 aaPredicted RBP27.31■■□□□ 1.96
CPNE1-202ENST00000352393 MYBL2P10244 700 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 SPA17Q15506 151 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 GRIK5Q16478 980 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 CCNI2Q6ZMN8 369 aaPredicted RBP27.31■■□□□ 1.96
CPNE1-202ENST00000352393 TRIM58Q8NG06 486 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 HPS3Q969F9 1004 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 SH2D4AQ9H788 454 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 ARHGAP20Q9P2F6 1191 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 SNX12Q9UMY4 172 aa27.31■■□□□ 1.96
CPNE1-202ENST00000352393 C2orf54Q08AI8 447 aa27.3■■□□□ 1.96
CPNE1-202ENST00000352393 KRT26Q7Z3Y9 468 aa27.3■■□□□ 1.96
CPNE1-202ENST00000352393 JADE2Q9NQC1 790 aa27.3■■□□□ 1.96
CPNE1-202ENST00000352393 SRP68Q9UHB9 627 aaKnown RBP27.3■■□□□ 1.96
CPNE1-202ENST00000352393 JRKLQ9Y4A0 524 aa27.3■■□□□ 1.96
CPNE1-202ENST00000352393 ABCB11O95342 1321 aa27.3■■□□□ 1.96
CPNE1-202ENST00000352393 MYO1CO00159 1063 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 LCA5LO95447 670 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 KCNQ4P56696 695 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 VWA3BQ502W6 1294 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 AFAP1L1Q8TED9 768 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 CALML4Q96GE6 196 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 SELENOOQ9BVL4 669 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 CAPN6Q9Y6Q1 641 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 ZMYND10O75800 440 aa27.29■■□□□ 1.96
CPNE1-202ENST00000352393 ITIH3Q06033 890 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms