RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 MCAMP43121 646 aa11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 HTRA4P83105 476 aaPredicted RBP11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 LMNB2Q03252 620 aa11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 CALD1Q05682 793 aaKnown RBP11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 ABCB5Q2M3G0 1257 aa11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 LRSAM1Q6UWE0 723 aa11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 MAPKAPK5Q8IW41 473 aa11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 KLHDC4Q8TBB5 520 aa11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 SUCLG2Q96I99 432 aa11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 NCDNQ9UBB6 729 aa11.05□□□□□ -0.64
UBE2D3-205ENST00000350435 PARNO95453 639 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 BRD1O95696 1058 aa11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 AOC1P19801 751 aa11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 ATP2B3Q16720 1220 aa11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 CERKLQ49MI3 558 aaPredicted RBP11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 TATDN1Q6P1N9 297 aa11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 ARMCX2Q7L311 632 aa11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 CRIPAKQ8N1N5 446 aa11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 ZNF384Q8TF68 577 aa11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 TGFBRAP1Q8WUH2 860 aa11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 CLEC1BQ9P126 229 aa11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 ZMIZ1Q9ULJ6 1067 aa11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 GNEQ9Y223 722 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-205ENST00000350435 NBEAQ8NFP9 2946 aa11.03□□□□□ -0.64
UBE2D3-205ENST00000350435 AMHP03971 560 aa11.03□□□□□ -0.64
UBE2D3-205ENST00000350435 SMPD1P17405 629 aa11.03□□□□□ -0.64
UBE2D3-205ENST00000350435 LURAP1LQ8IV03 231 aa11.03□□□□□ -0.64
UBE2D3-205ENST00000350435 MYOCDQ8IZQ8 938 aa11.03□□□□□ -0.64
UBE2D3-205ENST00000350435 AFAP1L1Q8TED9 768 aa11.03□□□□□ -0.64
UBE2D3-205ENST00000350435 YME1L1Q96TA2 773 aa11.03□□□□□ -0.64
UBE2D3-205ENST00000350435 RTP3Q9BQQ7 232 aa11.03□□□□□ -0.64
UBE2D3-205ENST00000350435 POLR3EQ9NVU0 708 aa11.03□□□□□ -0.64
UBE2D3-205ENST00000350435 SAP30BPQ9UHR5 308 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-205ENST00000350435 FLT1P17948 1338 aa11.03□□□□□ -0.64
UBE2D3-205ENST00000350435 PDS5AQ29RF7 1337 aaKnown RBP11.03□□□□□ -0.64
UBE2D3-205ENST00000350435 DNAJC25-GNG10A0A024R161 153 aa11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 CSPG5O95196 566 aa11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 PLCG2P16885 1265 aa11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 CTNNB1P35222 781 aa11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 ZNF200P98182 395 aaPredicted RBP11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 RASGRF1Q13972 1273 aa11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 CWF19L1Q69YN2 538 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 CAGE1Q8TC20 777 aa11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 RUNDC1Q96C34 613 aa11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 NSUN4Q96CB9 384 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 KAZALD1Q96I82 304 aa11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 C11orf84Q9BUA3 381 aaPredicted RBP11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 BICC1Q9H694 974 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-205ENST00000350435 SCN10AQ9Y5Y9 1956 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 F6X3S4 739 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 GRM6O15303 877 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 PI15O43692 258 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 BAG3O95817 575 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 CXCL10P02778 98 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 RB1P06400 928 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 RABL6Q3YEC7 729 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 VARS2Q5ST30 1063 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 CCDC102BQ68D86 513 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.01□□□□□ -0.654e-6■■■□□ 19.2
UBE2D3-205ENST00000350435 LRRC8DQ7L1W4 858 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 CCDC144CPQ8IYA2 1237 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 EFHBQ8N7U6 833 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 KATNBL1Q9H079 304 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 GPHNQ9NQX3 736 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 RAI14Q9P0K7 980 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 BARX2Q9UMQ3 279 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 LHX6Q9UPM6 363 aa11.01□□□□□ -0.65
UBE2D3-205ENST00000350435 A0A1W2PRG0 241 aa11□□□□□ -0.65
UBE2D3-205ENST00000350435 EYA2O00167 538 aa11□□□□□ -0.65
UBE2D3-205ENST00000350435 SELPP16109 830 aa11□□□□□ -0.65
UBE2D3-205ENST00000350435 SP100P23497 879 aaPredicted RBP11□□□□□ -0.65
UBE2D3-205ENST00000350435 GPNMBQ14956 572 aa11□□□□□ -0.65
UBE2D3-205ENST00000350435 TCTN1Q2MV58 587 aa11□□□□□ -0.65
UBE2D3-205ENST00000350435 NFRKBQ6P4R8 1299 aa11□□□□□ -0.65
UBE2D3-205ENST00000350435 SUMF1Q8NBK3 374 aa11□□□□□ -0.65
UBE2D3-205ENST00000350435 RIN2Q8WYP3 895 aaPredicted RBP11□□□□□ -0.65
UBE2D3-205ENST00000350435 SECISBP2LQ93073 1101 aaKnown RBP11□□□□□ -0.65
UBE2D3-205ENST00000350435 AATFQ9NY61 560 aaKnown RBP eCLIP11□□□□□ -0.65
UBE2D3-205ENST00000350435 ZNF214Q9UL59 606 aaPredicted RBP11□□□□□ -0.65
UBE2D3-205ENST00000350435 Q9Y3F1 56 aa11□□□□□ -0.65
UBE2D3-205ENST00000350435 NR2E1Q9Y466 385 aa11□□□□□ -0.65
UBE2D3-205ENST00000350435 C5orf67F2Z3F1 127 aa10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 KINO60870 393 aaKnown RBP10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 NBNO60934 754 aa10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 MYL3P08590 195 aa10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 PURAQ00577 322 aaKnown RBP10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 PTPN11Q06124 597 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 SEPT2Q15019 361 aa10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 TWISTNBQ3B726 338 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 SPICE1Q8N0Z3 855 aa10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 SUSD6Q92537 303 aa10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 MTG1Q9BT17 334 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 SERPINB13Q9UIV8 391 aa10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 USP18Q9UMW8 372 aa10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 ADAMTS5Q9UNA0 930 aa10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 ADAMTS8Q9UP79 889 aa10.99□□□□□ -0.65
UBE2D3-205ENST00000350435 VWA5AO00534 786 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 ALDH1L1O75891 902 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 PTGS1P23219 599 aa10.98□□□□□ -0.65
UBE2D3-205ENST00000350435 GUCY1A2P33402 732 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms