RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 EIF6P56537 245 aaKnown RBP16.25■□□□□ 0.19
SMTN-202ENST00000347557 LRRC41Q15345 812 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 EZH2Q15910 746 aaKnown RBP16.25■□□□□ 0.19
SMTN-202ENST00000347557 FAM71BQ8TC56 605 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 SETDB2Q96T68 719 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 TMEM47Q9BQJ4 181 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 TMEM260Q9NX78 707 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 RRP15Q9Y3B9 282 aaKnown RBP16.25■□□□□ 0.19
SMTN-202ENST00000347557 DUOX1Q9NRD9 1551 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 ITGB4P16144 1822 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 RHOBTB3O94955 611 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 OR52Z1P0C646 297 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 SMARCC1Q92922 1105 aaPredicted RBP16.25■□□□□ 0.19
SMTN-202ENST00000347557 RAD21O60216 631 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 CCNE1P24864 410 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 NOP2P46087 812 aaKnown RBP16.25■□□□□ 0.19
SMTN-202ENST00000347557 PPARDQ03181 441 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 SF3B3Q15393 1217 aaKnown RBP16.25■□□□□ 0.19
SMTN-202ENST00000347557 MAP9Q49MG5 647 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 C12orf60Q5U649 245 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 IFIH1Q9BYX4 1025 aaKnown RBP16.25■□□□□ 0.19
SMTN-202ENST00000347557 TRIM9Q9C026 710 aa16.25■□□□□ 0.19
SMTN-202ENST00000347557 STXBP3O00186 592 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 GGCXP38435 758 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 TUBB4BP68371 445 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.24■□□□□ 0.19
SMTN-202ENST00000347557 RRAGAQ7L523 313 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 KBTBD4Q9NVX7 518 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 A0A1W2PQC6 194 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 NCK2O43639 380 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 MARCH6O60337 910 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 GNAQP50148 359 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 ZBED6P86452 979 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 CKAP4Q07065 602 aaKnown RBP16.24■□□□□ 0.19
SMTN-202ENST00000347557 NONOQ15233 471 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMTN-202ENST00000347557 MUM1L1Q5H9M0 696 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 CCDC181Q5TID7 509 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 TTC19Q6DKK2 380 aaPredicted RBP16.24■□□□□ 0.19
SMTN-202ENST00000347557 CCDC155Q8N6L0 562 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 LINC00116Q8NCU8 138 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 BANK1Q8NDB2 785 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 TBCKQ8TEA7 893 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 AFAP1L1Q8TED9 768 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 MYH13Q9UKX3 1938 aa16.24■□□□□ 0.19
SMTN-202ENST00000347557 BICDL2A1A5D9 508 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 RASSF10A6NK89 507 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 EPHB6O15197 1021 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 GTF2A1P52655 376 aaPredicted RBP16.23■□□□□ 0.19
SMTN-202ENST00000347557 RNASE9P60153 205 aaKnown RBP16.23■□□□□ 0.19
SMTN-202ENST00000347557 ARID5AQ03989 594 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 GRM4Q14833 912 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 TDRD12Q587J7 1177 aaKnown RBP16.23■□□□□ 0.19
SMTN-202ENST00000347557 SND1Q7KZF4 910 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMTN-202ENST00000347557 DGKHQ86XP1 1220 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 EHBP1Q8NDI1 1231 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 HDAC7Q8WUI4 952 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 GJA10Q969M2 543 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 CALML4Q96GE6 196 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 DHTKD1Q96HY7 919 aaPredicted RBP16.23■□□□□ 0.19
SMTN-202ENST00000347557 RASSF4Q9H2L5 321 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 BARHL2Q9NY43 387 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 TBC1D7Q9P0N9 293 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 SEC63Q9UGP8 760 aaKnown RBP16.23■□□□□ 0.19
SMTN-202ENST00000347557 FRMPD2Q68DX3 1309 aaPredicted RBP16.23■□□□□ 0.19
SMTN-202ENST00000347557 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.23■□□□□ 0.19
SMTN-202ENST00000347557 BUB1O43683 1085 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 KCNB1Q14721 858 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 GRIPAP1Q4V328 841 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 CCDC70Q6NSX1 233 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 COG1Q8WTW3 980 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 PIGSQ96S52 555 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 KANSL2Q9H9L4 492 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 NLRC4Q9NPP4 1024 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 CAPN6Q9Y6Q1 641 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 EIF4A3P38919 411 aaKnown RBP16.23■□□□□ 0.19
SMTN-202ENST00000347557 SELENOOQ9BVL4 669 aa16.23■□□□□ 0.19
SMTN-202ENST00000347557 USO1O60763 962 aaKnown RBP16.22■□□□□ 0.19
SMTN-202ENST00000347557 NFRKBQ6P4R8 1299 aa16.22■□□□□ 0.19
SMTN-202ENST00000347557 CACNA2D4Q7Z3S7 1137 aa16.22■□□□□ 0.19
SMTN-202ENST00000347557 FAM114A1Q8IWE2 563 aa16.22■□□□□ 0.19
SMTN-202ENST00000347557 CCSER1Q9C0I3 900 aa16.22■□□□□ 0.19
SMTN-202ENST00000347557 HPCAL4Q9UM19 191 aa16.22■□□□□ 0.19
SMTN-202ENST00000347557 ZNF263O14978 683 aa16.22■□□□□ 0.19
SMTN-202ENST00000347557 WDR93Q6P2C0 686 aa16.22■□□□□ 0.19
SMTN-202ENST00000347557 COA7Q96BR5 231 aa16.22■□□□□ 0.19
SMTN-202ENST00000347557 MYCBPQ99417 103 aaPredicted RBP16.22■□□□□ 0.19
SMTN-202ENST00000347557 POLD4Q9HCU8 107 aa16.22■□□□□ 0.19
SMTN-202ENST00000347557 C6orf50Q9HD87 102 aa16.22■□□□□ 0.19
SMTN-202ENST00000347557 PSD3Q9NYI0 1048 aa16.22■□□□□ 0.19
SMTN-202ENST00000347557 TACC1O75410 805 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 SBK1Q52WX2 424 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 PTF1AQ7RTS3 328 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 TMC4Q7Z404 712 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 EYA3Q99504 573 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 LRRC1Q9BTT6 524 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 NUP58Q9BVL2 599 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 SEMA6BQ9H3T3 888 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 SH3GLB2Q9NR46 395 aa16.21■□□□□ 0.19
SMTN-202ENST00000347557 DOCK2Q92608 1830 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms