RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 CDC37Q16543 378 aaPredicted RBP20.75■□□□□ 0.91
CKLF-202ENST00000345436 USH1GQ495M9 461 aa20.75■□□□□ 0.91
CKLF-202ENST00000345436 DUSP28Q4G0W2 176 aa20.75■□□□□ 0.91
CKLF-202ENST00000345436 TAPT1Q6NXT6 567 aa20.75■□□□□ 0.91
CKLF-202ENST00000345436 SH3RF1Q7Z6J0 888 aa20.75■□□□□ 0.91
CKLF-202ENST00000345436 FBXO16Q8IX29 292 aaPredicted RBP20.75■□□□□ 0.91
CKLF-202ENST00000345436 ADGRF4Q8IZF3 695 aa20.75■□□□□ 0.91
CKLF-202ENST00000345436 WDR11Q9BZH6 1224 aa20.75■□□□□ 0.91
CKLF-202ENST00000345436 GPHNQ9NQX3 736 aaPredicted RBP20.75■□□□□ 0.91
CKLF-202ENST00000345436 MYADML2A6NDP7 307 aa20.74■□□□□ 0.91
CKLF-202ENST00000345436 NKRFO15226 690 aaKnown RBP eCLIP20.74■□□□□ 0.91
CKLF-202ENST00000345436 CPT1AP50416 773 aa20.74■□□□□ 0.91
CKLF-202ENST00000345436 CDK7P50613 346 aa20.74■□□□□ 0.91
CKLF-202ENST00000345436 FPGSQ05932 587 aa20.74■□□□□ 0.91
CKLF-202ENST00000345436 FAAP100Q0VG06 881 aa20.74■□□□□ 0.91
CKLF-202ENST00000345436 FBXO11Q86XK2 927 aa20.74■□□□□ 0.91
CKLF-202ENST00000345436 NCOA7Q8NI08 942 aa20.74■□□□□ 0.91
CKLF-202ENST00000345436 POLR3EQ9NVU0 708 aa20.74■□□□□ 0.91
CKLF-202ENST00000345436 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.73■□□□□ 0.91
CKLF-202ENST00000345436 ADCY6O43306 1168 aa20.73■□□□□ 0.91
CKLF-202ENST00000345436 TIMP1P01033 207 aa20.73■□□□□ 0.91
CKLF-202ENST00000345436 BEX3Q00994 111 aa20.73■□□□□ 0.91
CKLF-202ENST00000345436 FAM109BQ6ICB4 259 aaPredicted RBP20.73■□□□□ 0.91
CKLF-202ENST00000345436 SCFD2Q8WU76 684 aa20.73■□□□□ 0.91
CKLF-202ENST00000345436 VAT1LQ9HCJ6 419 aa20.73■□□□□ 0.91
CKLF-202ENST00000345436 PDGFCQ9NRA1 345 aa20.73■□□□□ 0.91
CKLF-202ENST00000345436 IFIT3O14879 490 aaKnown RBP20.72■□□□□ 0.91
CKLF-202ENST00000345436 SGSM2O43147 1006 aa20.72■□□□□ 0.91
CKLF-202ENST00000345436 KPNA6O60684 536 aa20.72■□□□□ 0.91
CKLF-202ENST00000345436 SHHQ15465 462 aa20.72■□□□□ 0.91
CKLF-202ENST00000345436 SLC30A10Q6XR72 485 aa20.72■□□□□ 0.91
CKLF-202ENST00000345436 TMEM199Q8N511 208 aa20.72■□□□□ 0.91
CKLF-202ENST00000345436 NSUN6Q8TEA1 469 aaKnown RBP20.72■□□□□ 0.91
CKLF-202ENST00000345436 AMNQ9BXJ7 453 aa20.72■□□□□ 0.91
CKLF-202ENST00000345436 ASTN1O14525 1302 aa20.72■□□□□ 0.91
CKLF-202ENST00000345436 RBM47A0AV96 593 aaKnown RBP20.71■□□□□ 0.91
CKLF-202ENST00000345436 KLRF2D3W0D1 207 aa20.71■□□□□ 0.91
CKLF-202ENST00000345436 PPIGQ13427 754 aaKnown RBP eCLIP20.71■□□□□ 0.91
CKLF-202ENST00000345436 ITGA7Q13683 1181 aa20.71■□□□□ 0.91
CKLF-202ENST00000345436 PPP2R5BQ15173 497 aa20.71■□□□□ 0.91
CKLF-202ENST00000345436 CXCL17Q6UXB2 119 aa20.71■□□□□ 0.91
CKLF-202ENST00000345436 SAMD3Q8N6K7 520 aa20.71■□□□□ 0.91
CKLF-202ENST00000345436 PURBQ96QR8 312 aaKnown RBP20.71■□□□□ 0.91
CKLF-202ENST00000345436 IWS1Q96ST2 819 aa20.71■□□□□ 0.91
CKLF-202ENST00000345436 MAP3K20Q9NYL2 800 aaKnown RBP20.71■□□□□ 0.91
CKLF-202ENST00000345436 CTAGE5O15320 804 aa20.7■□□□□ 0.9
CKLF-202ENST00000345436 CYP21A2P08686 494 aa20.7■□□□□ 0.9
CKLF-202ENST00000345436 TTLL4Q14679 1199 aa20.7■□□□□ 0.9
CKLF-202ENST00000345436 WTAPQ15007 396 aa20.7■□□□□ 0.9
CKLF-202ENST00000345436 SEC23AQ15436 765 aa20.7■□□□□ 0.9
CKLF-202ENST00000345436 QRICH1Q2TAL8 776 aa20.7■□□□□ 0.9
CKLF-202ENST00000345436 MFSD5Q6N075 450 aa20.7■□□□□ 0.9
CKLF-202ENST00000345436 CATIPQ7Z7H3 387 aa20.7■□□□□ 0.9
CKLF-202ENST00000345436 OR6J1Q8NGC5 347 aa20.7■□□□□ 0.9
CKLF-202ENST00000345436 RNPC3Q96LT9 517 aaKnown RBP20.7■□□□□ 0.9
CKLF-202ENST00000345436 JMJD4Q9H9V9 463 aa20.7■□□□□ 0.9
CKLF-202ENST00000345436 SUPT20HL2P0C7V6 817 aa20.69■□□□□ 0.9
CKLF-202ENST00000345436 EDNRBP24530 442 aa20.69■□□□□ 0.9
CKLF-202ENST00000345436 SMAD3P84022 425 aaKnown RBP20.69■□□□□ 0.9
CKLF-202ENST00000345436 PTH1RQ03431 593 aa20.69■□□□□ 0.9
CKLF-202ENST00000345436 STXBP2Q15833 593 aa20.69■□□□□ 0.9
CKLF-202ENST00000345436 ZNF697Q5TEC3 545 aa20.69■□□□□ 0.9
CKLF-202ENST00000345436 MAP4K1Q92918 833 aa20.69■□□□□ 0.9
CKLF-202ENST00000345436 CPVLQ9H3G5 476 aa20.69■□□□□ 0.9
CKLF-202ENST00000345436 TBX21Q9UL17 535 aa20.69■□□□□ 0.9
CKLF-202ENST00000345436 E7EWF7 191 aa20.68■□□□□ 0.9
CKLF-202ENST00000345436 TXNP10599 105 aaKnown RBP20.68■□□□□ 0.9
CKLF-202ENST00000345436 IRX5P78411 483 aaPredicted RBP20.68■□□□□ 0.9
CKLF-202ENST00000345436 ARHGEF16Q5VV41 709 aa20.68■□□□□ 0.9
CKLF-202ENST00000345436 CYB5R4Q7L1T6 521 aa20.68■□□□□ 0.9
CKLF-202ENST00000345436 FAM126BQ8IXS8 530 aa20.68■□□□□ 0.9
CKLF-202ENST00000345436 TMTC2Q8N394 836 aa20.68■□□□□ 0.9
CKLF-202ENST00000345436 SLC43A3Q8NBI5 491 aa20.68■□□□□ 0.9
CKLF-202ENST00000345436 RMDN3Q96TC7 470 aa20.68■□□□□ 0.9
CKLF-202ENST00000345436 IL25Q9H293 177 aa20.68■□□□□ 0.9
CKLF-202ENST00000345436 LAMA4Q16363 1823 aa20.67■□□□□ 0.9
CKLF-202ENST00000345436 PALM3A6NDB9 673 aaPredicted RBP20.67■□□□□ 0.9
CKLF-202ENST00000345436 ZBTB5O15062 677 aa20.67■□□□□ 0.9
CKLF-202ENST00000345436 TMEM67Q5HYA8 995 aa20.67■□□□□ 0.9
CKLF-202ENST00000345436 C9orf50Q5SZB4 431 aa20.67■□□□□ 0.9
CKLF-202ENST00000345436 CASC1Q6TDU7 716 aa20.67■□□□□ 0.9
CKLF-202ENST00000345436 SYTL5Q8TDW5 730 aaPredicted RBP20.67■□□□□ 0.9
CKLF-202ENST00000345436 MTG1Q9BT17 334 aaPredicted RBP20.67■□□□□ 0.9
CKLF-202ENST00000345436 MTA3Q9BTC8 594 aa20.67■□□□□ 0.9
CKLF-202ENST00000345436 MTIF3Q9H2K0 278 aaKnown RBP20.67■□□□□ 0.9
CKLF-202ENST00000345436 MTMR10Q9NXD2 777 aa20.67■□□□□ 0.9
CKLF-202ENST00000345436 STXBP5LQ9Y2K9 1186 aa20.67■□□□□ 0.9
CKLF-202ENST00000345436 PCDHA1Q9Y5I3 950 aa20.67■□□□□ 0.9
CKLF-202ENST00000345436 DDX49Q9Y6V7 483 aaKnown RBP20.67■□□□□ 0.9
CKLF-202ENST00000345436 MCM3APO60318 1980 aa20.66■□□□□ 0.9
CKLF-202ENST00000345436 EIF3JO75822 258 aaKnown RBP20.66■□□□□ 0.9
CKLF-202ENST00000345436 CFBP00751 764 aa20.66■□□□□ 0.9
CKLF-202ENST00000345436 MYL3P08590 195 aa20.66■□□□□ 0.9
CKLF-202ENST00000345436 ITGB8P26012 769 aa20.66■□□□□ 0.9
CKLF-202ENST00000345436 CENPQQ7L2Z9 268 aaPredicted RBP20.66■□□□□ 0.9
CKLF-202ENST00000345436 MAD2L2Q9UI95 211 aa20.66■□□□□ 0.9
CKLF-202ENST00000345436 CD4P01730 458 aa20.65■□□□□ 0.9
CKLF-202ENST00000345436 KIF5BP33176 963 aa20.65■□□□□ 0.9
CKLF-202ENST00000345436 GRM4Q14833 912 aa20.65■□□□□ 0.9
CKLF-202ENST00000345436 Q7L0L9 218 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms