RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 PPFIA4O75335 1185 aa21.03■□□□□ 0.96
PSPC1-201ENST00000338910 MCM7P33993 719 aa21.03■□□□□ 0.96
PSPC1-201ENST00000338910 ARHGAP25P42331 645 aa21.03■□□□□ 0.96
PSPC1-201ENST00000338910 FXR1P51114 621 aaKnown RBP eCLIP21.03■□□□□ 0.96
PSPC1-201ENST00000338910 BLIDQ8IZY5 108 aa21.03■□□□□ 0.96
PSPC1-201ENST00000338910 DDX4Q9NQI0 724 aaKnown RBP21.03■□□□□ 0.96
PSPC1-201ENST00000338910 SNED1Q8TER0 1413 aa21.02■□□□□ 0.96
PSPC1-201ENST00000338910 RNF40O75150 1001 aa21.02■□□□□ 0.96
PSPC1-201ENST00000338910 CALML3P27482 149 aa21.02■□□□□ 0.96
PSPC1-201ENST00000338910 BAG6P46379 1132 aa21.02■□□□□ 0.96
PSPC1-201ENST00000338910 CUL4BQ13620 913 aa21.02■□□□□ 0.96
PSPC1-201ENST00000338910 USP17L2Q6R6M4 530 aa21.02■□□□□ 0.96
PSPC1-201ENST00000338910 HEATR3Q7Z4Q2 680 aa21.02■□□□□ 0.96
PSPC1-201ENST00000338910 USP40Q9NVE5 1235 aa21.02■□□□□ 0.96
PSPC1-201ENST00000338910 DDX60LQ5H9U9 1706 aaKnown RBP21.02■□□□□ 0.95
PSPC1-201ENST00000338910 A0A087X0B3 334 aa21.02■□□□□ 0.95
PSPC1-201ENST00000338910 ECE2O60344 883 aa21.02■□□□□ 0.95
PSPC1-201ENST00000338910 PRPF6O94906 941 aaKnown RBP21.02■□□□□ 0.95
PSPC1-201ENST00000338910 SYF2O95926 243 aaKnown RBP21.02■□□□□ 0.95
PSPC1-201ENST00000338910 KIAA0825Q8IV33 1275 aa21.02■□□□□ 0.95
PSPC1-201ENST00000338910 SYMPKQ92797 1274 aaKnown RBP21.02■□□□□ 0.95
PSPC1-201ENST00000338910 SYNRGQ9UMZ2 1314 aa21.01■□□□□ 0.95
PSPC1-201ENST00000338910 BMP15O95972 392 aa21.01■□□□□ 0.95
PSPC1-201ENST00000338910 AOC3Q16853 763 aa21.01■□□□□ 0.95
PSPC1-201ENST00000338910 TEKT1Q969V4 418 aa21.01■□□□□ 0.95
PSPC1-201ENST00000338910 FERMT2Q96AC1 680 aa21.01■□□□□ 0.95
PSPC1-201ENST00000338910 CTAGE1Q96RT6 745 aa21.01■□□□□ 0.95
PSPC1-201ENST00000338910 MYO6Q9UM54 1294 aa21.01■□□□□ 0.95
PSPC1-201ENST00000338910 PCDHA4Q9UN74 947 aa21.01■□□□□ 0.95
PSPC1-201ENST00000338910 ITIH6Q6UXX5 1313 aa21.01■□□□□ 0.95
PSPC1-201ENST00000338910 CPP00450 1065 aa21■□□□□ 0.95
PSPC1-201ENST00000338910 CD44P16070 742 aaKnown RBP21■□□□□ 0.95
PSPC1-201ENST00000338910 GUCY2CP25092 1073 aa21■□□□□ 0.95
PSPC1-201ENST00000338910 ERVK-24P63145 666 aa21■□□□□ 0.95
PSPC1-201ENST00000338910 APOBEC3HQ6NTF7 200 aaKnown RBP21■□□□□ 0.95
PSPC1-201ENST00000338910 TMTC1Q8IUR5 882 aa21■□□□□ 0.95
PSPC1-201ENST00000338910 SH3GLB2Q9NR46 395 aa21■□□□□ 0.95
PSPC1-201ENST00000338910 MYH8P13535 1937 aa21■□□□□ 0.95
PSPC1-201ENST00000338910 ANKRD65E5RJM6 399 aa21■□□□□ 0.95
PSPC1-201ENST00000338910 ATP2C1P98194 919 aaPredicted RBP21■□□□□ 0.95
PSPC1-201ENST00000338910 HHIPL2Q6UWX4 724 aa21■□□□□ 0.95
PSPC1-201ENST00000338910 AFAP1L1Q8TED9 768 aa21■□□□□ 0.95
PSPC1-201ENST00000338910 VAT1LQ9HCJ6 419 aa21■□□□□ 0.95
PSPC1-201ENST00000338910 ADAMTSL1Q8N6G6 1762 aa21■□□□□ 0.95
PSPC1-201ENST00000338910 C21orf2O43822 256 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 PARP1P09874 1014 aaKnown RBP20.99■□□□□ 0.95
PSPC1-201ENST00000338910 NCAPH2Q6IBW4 605 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 CDC42EP5Q6NZY7 148 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 GEMIN8Q9NWZ8 242 aaKnown RBP20.99■□□□□ 0.95
PSPC1-201ENST00000338910 SCN9AQ15858 1988 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 AFMP43652 599 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 STX17P56962 302 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 STRIP1Q5VSL9 837 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 KLHL10Q6JEL2 608 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 EFCAB13Q8IY85 973 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 PLEKHA4Q9H4M7 779 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 PCDHAC2Q9Y5I4 1007 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 FOCADQ5VW36 1801 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 ZC3H4Q9UPT8 1303 aaKnown RBP20.99■□□□□ 0.95
PSPC1-201ENST00000338910 QSER1Q2KHR3 1735 aa20.99■□□□□ 0.95
PSPC1-201ENST00000338910 CRKP46108 304 aa20.98■□□□□ 0.95
PSPC1-201ENST00000338910 TRAPPC10P48553 1259 aa20.98■□□□□ 0.95
PSPC1-201ENST00000338910 EIF6P56537 245 aaKnown RBP20.98■□□□□ 0.95
PSPC1-201ENST00000338910 FILIP1LQ4L180 1135 aa20.98■□□□□ 0.95
PSPC1-201ENST00000338910 DACT2Q5SW24 774 aa20.98■□□□□ 0.95
PSPC1-201ENST00000338910 PAXIP1Q6ZW49 1069 aaPredicted RBP20.98■□□□□ 0.95
PSPC1-201ENST00000338910 CCDC148Q8NFR7 591 aa20.98■□□□□ 0.95
PSPC1-201ENST00000338910 ABHD10Q9NUJ1 306 aa20.98■□□□□ 0.95
PSPC1-201ENST00000338910 BARHL2Q9NY43 387 aa20.98■□□□□ 0.95
PSPC1-201ENST00000338910 STXBP3O00186 592 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 USP14P54578 494 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 NFIAQ12857 509 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 IL17AQ16552 155 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 CLEC10AQ8IUN9 316 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 FBXO41Q8TF61 875 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 LZTS2Q9BRK4 669 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 HPCAL4Q9UM19 191 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 CCDC194A0A1B0GVG4 234 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 USP17L5A8MUK1 530 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 AKR1B1P15121 316 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 CASP1P29466 404 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 GABPAQ06546 454 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 DNAJC21Q5F1R6 531 aaKnown RBP20.97■□□□□ 0.95
PSPC1-201ENST00000338910 UBA5Q9GZZ9 404 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 PCDHA6Q9UN73 950 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 PCDHA8Q9Y5H6 950 aa20.97■□□□□ 0.95
PSPC1-201ENST00000338910 CYP26C1Q6V0L0 522 aa20.96■□□□□ 0.95
PSPC1-201ENST00000338910 TRAPPC11Q7Z392 1133 aa20.96■□□□□ 0.95
PSPC1-201ENST00000338910 UTRNP46939 3433 aa20.96■□□□□ 0.95
PSPC1-201ENST00000338910 M0R2N6 131 aa20.96■□□□□ 0.95
PSPC1-201ENST00000338910 SLURP2P0DP57 97 aa20.96■□□□□ 0.95
PSPC1-201ENST00000338910 RBM5P52756 815 aaKnown RBP eCLIP20.96■□□□□ 0.95
PSPC1-201ENST00000338910 SH3RF1Q7Z6J0 888 aa20.96■□□□□ 0.95
PSPC1-201ENST00000338910 MTMR4Q9NYA4 1195 aa20.96■□□□□ 0.95
PSPC1-201ENST00000338910 SERPINB13Q9UIV8 391 aa20.96■□□□□ 0.95
PSPC1-201ENST00000338910 PPP1R3GB7ZBB8 358 aa20.95■□□□□ 0.94
PSPC1-201ENST00000338910 RNF225M0QZC1 329 aaPredicted RBP20.95■□□□□ 0.94
PSPC1-201ENST00000338910 CACNB3P54284 484 aa20.95■□□□□ 0.94
PSPC1-201ENST00000338910 INF2Q27J81 1249 aa20.95■□□□□ 0.94
PSPC1-201ENST00000338910 TADA2BQ86TJ2 420 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms