RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 VPS18Q9P253 973 aa20.04■□□□□ 0.8
TRIM50-201ENST00000333149 RPS6KA5O75582 802 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 LDHBP07195 334 aaKnown RBP20.03■□□□□ 0.8
TRIM50-201ENST00000333149 ACTN2P35609 894 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 AARSP49588 968 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRIM50-201ENST00000333149 GSTO1P78417 241 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 AMPD3Q01432 767 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 PDE4DQ08499 809 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 AMOTL1Q8IY63 956 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 SETDB2Q96T68 719 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 HDAC6Q9UBN7 1215 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 LRRIQ3A6PVS8 624 aaPredicted RBP20.03■□□□□ 0.8
TRIM50-201ENST00000333149 N4BP1O75113 896 aaKnown RBP20.03■□□□□ 0.8
TRIM50-201ENST00000333149 BAG3O95817 575 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 TRIM21P19474 475 aaKnown RBP20.03■□□□□ 0.8
TRIM50-201ENST00000333149 RASA1P20936 1047 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 LMAN1P49257 510 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 STK4Q13043 487 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 NONOQ15233 471 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRIM50-201ENST00000333149 KIAA1328Q86T90 577 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 CNOT6LQ96LI5 555 aaKnown RBP20.03■□□□□ 0.8
TRIM50-201ENST00000333149 PLIN2Q99541 437 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 LACRTQ9GZZ8 138 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 LRRC4BQ9NT99 713 aa20.03■□□□□ 0.8
TRIM50-201ENST00000333149 RCCD1A6NED2 376 aa20.02■□□□□ 0.8
TRIM50-201ENST00000333149 KLRF2D3W0D1 207 aa20.02■□□□□ 0.8
TRIM50-201ENST00000333149 PES1O00541 588 aaKnown RBP20.02■□□□□ 0.8
TRIM50-201ENST00000333149 ENC1O14682 589 aa20.02■□□□□ 0.8
TRIM50-201ENST00000333149 GNPATO15228 680 aa20.02■□□□□ 0.79
TRIM50-201ENST00000333149 GNA11P29992 359 aa20.02■□□□□ 0.79
TRIM50-201ENST00000333149 IRX5P78411 483 aaPredicted RBP20.02■□□□□ 0.79
TRIM50-201ENST00000333149 MAP9Q49MG5 647 aa20.02■□□□□ 0.79
TRIM50-201ENST00000333149 CENPPQ6IPU0 288 aa20.02■□□□□ 0.79
TRIM50-201ENST00000333149 TPTE2Q6XPS3 522 aa20.02■□□□□ 0.79
TRIM50-201ENST00000333149 NBPF5PQ86XG9 351 aaPredicted RBP20.02■□□□□ 0.79
TRIM50-201ENST00000333149 MMTAG2Q9BU76 263 aaKnown RBP20.02■□□□□ 0.79
TRIM50-201ENST00000333149 ZNF287Q9HBT7 754 aa20.02■□□□□ 0.79
TRIM50-201ENST00000333149 C6orf50Q9HD87 102 aa20.02■□□□□ 0.79
TRIM50-201ENST00000333149 FAN1Q9Y2M0 1017 aa20.02■□□□□ 0.79
TRIM50-201ENST00000333149 TAF1LQ8IZX4 1826 aa20.01■□□□□ 0.79
TRIM50-201ENST00000333149 IPO7O95373 1038 aaKnown RBP20.01■□□□□ 0.79
TRIM50-201ENST00000333149 HOXA7P31268 230 aaPredicted RBP20.01■□□□□ 0.79
TRIM50-201ENST00000333149 HSP90B2PQ58FF3 399 aa20.01■□□□□ 0.79
TRIM50-201ENST00000333149 CNNM4Q6P4Q7 775 aa20.01■□□□□ 0.79
TRIM50-201ENST00000333149 NEK8Q86SG6 692 aa20.01■□□□□ 0.79
TRIM50-201ENST00000333149 CERS3Q8IU89 383 aa20.01■□□□□ 0.79
TRIM50-201ENST00000333149 NOC4LQ9BVI4 516 aaKnown RBP20.01■□□□□ 0.79
TRIM50-201ENST00000333149 TSGA10Q9BZW7 698 aa20.01■□□□□ 0.79
TRIM50-201ENST00000333149 CWC15Q9P013 229 aaKnown RBP20.01■□□□□ 0.79
TRIM50-201ENST00000333149 LEMD3Q9Y2U8 911 aa20.01■□□□□ 0.79
TRIM50-201ENST00000333149 ABCB11O95342 1321 aa20.01■□□□□ 0.79
TRIM50-201ENST00000333149 LDHCP07864 332 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 VAV2P52735 878 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 RAD51AP2Q09MP3 1159 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 SMIM5Q71RC9 77 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 TFR2Q9UP52 801 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 PLAGL2Q9UPG8 496 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 RTCBQ9Y3I0 505 aaKnown RBP20■□□□□ 0.79
TRIM50-201ENST00000333149 NAV1Q8NEY1 1877 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 ESYT2A0FGR8 921 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 SMCO2A6NFE2 343 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 MTIF2P46199 727 aaKnown RBP20■□□□□ 0.79
TRIM50-201ENST00000333149 NOVP48745 357 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 KLK7P49862 253 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 NAPAP54920 295 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 ASIC1P78348 528 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 SLC4A8Q2Y0W8 1093 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 SLC27A3Q5K4L6 730 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 NEDD1Q8NHV4 660 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 TSPYL1Q9H0U9 437 aa20■□□□□ 0.79
TRIM50-201ENST00000333149 PVALEFA0A1B0GWK0 134 aa19.99■□□□□ 0.79
TRIM50-201ENST00000333149 CCNT1O60563 726 aaKnown RBP19.99■□□□□ 0.79
TRIM50-201ENST00000333149 LCA5LO95447 670 aa19.99■□□□□ 0.79
TRIM50-201ENST00000333149 PRLRP16471 622 aa19.99■□□□□ 0.79
TRIM50-201ENST00000333149 ITIH3Q06033 890 aa19.99■□□□□ 0.79
TRIM50-201ENST00000333149 LETM2Q2VYF4 491 aa19.99■□□□□ 0.79
TRIM50-201ENST00000333149 FKBP15Q5T1M5 1219 aa19.99■□□□□ 0.79
TRIM50-201ENST00000333149 C15orf52Q6ZUT6 534 aaKnown RBP19.99■□□□□ 0.79
TRIM50-201ENST00000333149 ZNF572Q7Z3I7 529 aaPredicted RBP19.99■□□□□ 0.79
TRIM50-201ENST00000333149 KIAA0895Q8NCT3 520 aa19.99■□□□□ 0.79
TRIM50-201ENST00000333149 SEMA6BQ9H3T3 888 aa19.99■□□□□ 0.79
TRIM50-201ENST00000333149 STX8Q9UNK0 236 aa19.99■□□□□ 0.79
TRIM50-201ENST00000333149 JAG2Q9Y219 1238 aa19.99■□□□□ 0.79
TRIM50-201ENST00000333149 SRGAP2O75044 1071 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 FCER1AP12319 257 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 KIF5AQ12840 1032 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 FOXR2Q6PJQ5 311 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 SLC44A5Q8NCS7 719 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 TGFBRAP1Q8WUH2 860 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 ZC3H4Q9UPT8 1303 aaKnown RBP19.98■□□□□ 0.79
TRIM50-201ENST00000333149 ZNF263O14978 683 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 CAPN2P17655 700 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 SLC20A2Q08357 652 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 C16orf86Q6ZW13 317 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 CCDC102AQ96A19 550 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 RRP36Q96EU6 259 aaKnown RBP19.98■□□□□ 0.79
TRIM50-201ENST00000333149 CALML4Q96GE6 196 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 MTMR9Q96QG7 549 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 STK17AQ9UEE5 414 aa19.98■□□□□ 0.79
TRIM50-201ENST00000333149 SIK3Q9Y2K2 1263 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms