RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 DDX60Q8IY21 1712 aaKnown RBP11.42□□□□□ -0.58
SF3B2-201ENST00000322535 SRGAP2O75044 1071 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 GUCY1A3Q02108 690 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 SF3B3Q15393 1217 aaKnown RBP11.42□□□□□ -0.58
SF3B2-201ENST00000322535 Q4G0T1 1027 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 MCMDC2Q4G0Z9 681 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 SPECC1Q5M775 1068 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 SDCCAG8Q86SQ7 713 aaPredicted RBP11.42□□□□□ -0.58
SF3B2-201ENST00000322535 HOOK3Q86VS8 718 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 FAM114A1Q8IWE2 563 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 OGFOD1Q8N543 542 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 SLC35B4Q969S0 331 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 HOOK2Q96ED9 719 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 STAMBPL1Q96FJ0 436 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 MAST3O60307 1309 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 POLR3DP05423 398 aaPredicted RBP11.42□□□□□ -0.58
SF3B2-201ENST00000322535 FERP16591 822 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 XBP1P17861 261 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 MYL5Q02045 173 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 STK38Q15208 465 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 SND1Q7KZF4 910 aaKnown RBP eCLIP11.42□□□□□ -0.58
SF3B2-201ENST00000322535 SPATA5Q8NB90 893 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 RPGRQ92834 1020 aaKnown RBP11.42□□□□□ -0.58
SF3B2-201ENST00000322535 RUFY1Q96T51 708 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 NUP58Q9BVL2 599 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.42□□□□□ -0.58
SF3B2-201ENST00000322535 TRAIPQ9BWF2 469 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 HSD3B7Q9H2F3 369 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 INCENPQ9NQS7 918 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 DENND2AQ9ULE3 1009 aa11.42□□□□□ -0.58
SF3B2-201ENST00000322535 B4DLN1 442 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 F8VZ95 297 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 LY75O60449 1722 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 ADD1P35611 737 aaKnown RBP11.41□□□□□ -0.58
SF3B2-201ENST00000322535 TOB2Q14106 344 aaPredicted RBP11.41□□□□□ -0.58
SF3B2-201ENST00000322535 CCDC121Q6ZUS5 278 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 FUKQ8N0W3 1084 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 MAGEB6Q8N7X4 407 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 SMCR8Q8TEV9 937 aaPredicted RBP11.41□□□□□ -0.58
SF3B2-201ENST00000322535 NAPGQ99747 312 aaPredicted RBP11.41□□□□□ -0.58
SF3B2-201ENST00000322535 MTA3Q9BTC8 594 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 OCEL1Q9H607 264 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 MYO5AQ9Y4I1 1855 aaKnown RBP11.41□□□□□ -0.58
SF3B2-201ENST00000322535 POLRMTO00411 1230 aaKnown RBP11.41□□□□□ -0.58
SF3B2-201ENST00000322535 RNF113AO15541 343 aaKnown RBP11.41□□□□□ -0.58
SF3B2-201ENST00000322535 PSMA5P28066 241 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 NECTIN1Q15223 517 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 OTUD7BQ6GQQ9 843 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 RAD9BQ6WBX8 426 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 RASSF8Q8NHQ8 419 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 MAP4K1Q92918 833 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 ARL8AQ96BM9 186 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 RRP36Q96EU6 259 aaKnown RBP11.41□□□□□ -0.58
SF3B2-201ENST00000322535 VIPAS39Q9H9C1 493 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 INTS13Q9NVM9 706 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 RABL2BQ9UNT1 228 aa11.41□□□□□ -0.58
SF3B2-201ENST00000322535 ZNF532Q9HCE3 1301 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 SMIM22K7EJ46 135 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 HDLBPQ00341 1268 aaKnown RBP11.4□□□□□ -0.58
SF3B2-201ENST00000322535 KBTBD12Q3ZCT8 623 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 NAA35Q5VZE5 725 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 IQCF2Q8IXL9 164 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 MAGEC3Q8TD91 643 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 TAF4BQ92750 862 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 AATFQ9NY61 560 aaKnown RBP eCLIP11.4□□□□□ -0.58
SF3B2-201ENST00000322535 LRP2BPQ9P2M1 347 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 PNPLA7Q6ZV29 1317 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 BACH1O14867 736 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 PLSCR1O15162 318 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 SMIM24O75264 130 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 CYP21A2P08686 494 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 RPL13P26373 211 aaKnown RBP11.4□□□□□ -0.58
SF3B2-201ENST00000322535 APBA1Q02410 837 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 CUL3Q13618 768 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 GALNT15Q8N3T1 639 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 CAGE1Q8TC20 777 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 AKT1S1Q96B36 256 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 FAM167BQ9BTA0 163 aa11.4□□□□□ -0.58
SF3B2-201ENST00000322535 C4AP0C0L4 1744 aa11.4□□□□□ -0.59
SF3B2-201ENST00000322535 RIMBP2O15034 1052 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 PRKAB2O43741 272 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 HSPD1P10809 573 aaKnown RBP11.39□□□□□ -0.59
SF3B2-201ENST00000322535 SLC10A5Q5PT55 438 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 SPECC1LQ69YQ0 1117 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 OLFML1Q6UWY5 402 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 RAB11FIP4Q86YS3 637 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 TRMT44Q8IYL2 757 aaKnown RBP11.39□□□□□ -0.59
SF3B2-201ENST00000322535 FAM84BQ96KN1 310 aaPredicted RBP11.39□□□□□ -0.59
SF3B2-201ENST00000322535 TM6SF1Q9BZW5 370 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 PPANQ9NQ55 473 aaKnown RBP11.39□□□□□ -0.59
SF3B2-201ENST00000322535 PCMTD2Q9NV79 361 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 ADGRG1Q9Y653 693 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 RREB1Q92766 1687 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 E7EVH7 732 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 PNOCQ13519 176 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 ANKRD1Q15327 319 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 PKN1Q16512 942 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 UHMK1Q8TAS1 419 aaKnown RBP11.39□□□□□ -0.59
SF3B2-201ENST00000322535 NKX2-3Q8TAU0 364 aa11.39□□□□□ -0.59
SF3B2-201ENST00000322535 ZNF570Q96NI8 536 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms