RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 PSMC6P62333 389 aa20.55■□□□□ 0.88
EXOSC4-201ENST00000316052 ZNF543Q08ER8 600 aa20.55■□□□□ 0.88
EXOSC4-201ENST00000316052 MFSD6Q6ZSS7 791 aa20.55■□□□□ 0.88
EXOSC4-201ENST00000316052 TTC14Q96N46 770 aa20.55■□□□□ 0.88
EXOSC4-201ENST00000316052 TRPV6Q9H1D0 765 aa20.55■□□□□ 0.88
EXOSC4-201ENST00000316052 UMODL1Q5DID0 1318 aa20.54■□□□□ 0.88
EXOSC4-201ENST00000316052 PTPDC1A2A3K4 754 aa20.54■□□□□ 0.88
EXOSC4-201ENST00000316052 ZEB2O60315 1214 aa20.54■□□□□ 0.88
EXOSC4-201ENST00000316052 SNHG28P0DPA3 235 aa20.54■□□□□ 0.88
EXOSC4-201ENST00000316052 FOSL2P15408 326 aa20.54■□□□□ 0.88
EXOSC4-201ENST00000316052 SDSP20132 328 aa20.54■□□□□ 0.88
EXOSC4-201ENST00000316052 PBX2P40425 430 aa20.54■□□□□ 0.88
EXOSC4-201ENST00000316052 DUSP28Q4G0W2 176 aa20.54■□□□□ 0.88
EXOSC4-201ENST00000316052 SLC30A10Q6XR72 485 aa20.54■□□□□ 0.88
EXOSC4-201ENST00000316052 PLEKHM2Q8IWE5 1019 aa20.54■□□□□ 0.88
EXOSC4-201ENST00000316052 ADD3Q9UEY8 706 aaKnown RBP20.54■□□□□ 0.88
EXOSC4-201ENST00000316052 IGHDP01880 384 aa20.53■□□□□ 0.88
EXOSC4-201ENST00000316052 CALML3P27482 149 aa20.53■□□□□ 0.88
EXOSC4-201ENST00000316052 TIFAQ96CG3 184 aa20.53■□□□□ 0.88
EXOSC4-201ENST00000316052 ZKSCAN3Q9BRR0 538 aa20.53■□□□□ 0.88
EXOSC4-201ENST00000316052 WDR11Q9BZH6 1224 aa20.53■□□□□ 0.88
EXOSC4-201ENST00000316052 HIPK3Q9H422 1215 aa20.53■□□□□ 0.88
EXOSC4-201ENST00000316052 ZNF576Q9H609 170 aa20.53■□□□□ 0.88
EXOSC4-201ENST00000316052 IL23AQ9NPF7 189 aa20.53■□□□□ 0.88
EXOSC4-201ENST00000316052 NEDD4P46934 1319 aa20.53■□□□□ 0.88
EXOSC4-201ENST00000316052 RBM47A0AV96 593 aaKnown RBP20.52■□□□□ 0.88
EXOSC4-201ENST00000316052 B4GALT4O60513 344 aa20.52■□□□□ 0.88
EXOSC4-201ENST00000316052 PCP11498 1178 aaKnown RBP20.52■□□□□ 0.88
EXOSC4-201ENST00000316052 NOC4LQ9BVI4 516 aaKnown RBP20.52■□□□□ 0.88
EXOSC4-201ENST00000316052 PBX4Q9BYU1 374 aa20.52■□□□□ 0.88
EXOSC4-201ENST00000316052 CPVLQ9H3G5 476 aa20.52■□□□□ 0.88
EXOSC4-201ENST00000316052 RWDD1Q9H446 243 aaPredicted RBP20.52■□□□□ 0.88
EXOSC4-201ENST00000316052 CXXC1Q9P0U4 656 aaPredicted RBP20.52■□□□□ 0.88
EXOSC4-201ENST00000316052 GOLGA8HP0CJ92 632 aa20.51■□□□□ 0.87
EXOSC4-201ENST00000316052 CCL23P55773 120 aa20.51■□□□□ 0.87
EXOSC4-201ENST00000316052 RPS6P62753 249 aaKnown RBP20.51■□□□□ 0.87
EXOSC4-201ENST00000316052 PSRC1Q6PGN9 363 aaPredicted RBP20.51■□□□□ 0.87
EXOSC4-201ENST00000316052 RNF207Q6ZRF8 634 aa20.51■□□□□ 0.87
EXOSC4-201ENST00000316052 CHD1LQ86WJ1 897 aa20.51■□□□□ 0.87
EXOSC4-201ENST00000316052 OSBPL3Q9H4L5 887 aa20.51■□□□□ 0.87
EXOSC4-201ENST00000316052 LOC102724159A0A0B4J2E5 919 aa20.5■□□□□ 0.87
EXOSC4-201ENST00000316052 NUCB1Q02818 461 aa20.5■□□□□ 0.87
EXOSC4-201ENST00000316052 AAMPQ13685 434 aa20.5■□□□□ 0.87
EXOSC4-201ENST00000316052 PWP2Q15269 919 aaKnown RBP20.5■□□□□ 0.87
EXOSC4-201ENST00000316052 CWC27Q6UX04 472 aaKnown RBP20.5■□□□□ 0.87
EXOSC4-201ENST00000316052 HERVK_113Q902F9 699 aa20.5■□□□□ 0.87
EXOSC4-201ENST00000316052 VWCEQ96DN2 955 aa20.5■□□□□ 0.87
EXOSC4-201ENST00000316052 SEZ6LQ9BYH1 1024 aa20.5■□□□□ 0.87
EXOSC4-201ENST00000316052 UBA5Q9GZZ9 404 aa20.5■□□□□ 0.87
EXOSC4-201ENST00000316052 WNT8AQ9H1J5 351 aa20.5■□□□□ 0.87
EXOSC4-201ENST00000316052 RNF41Q9H4P4 317 aaPredicted RBP20.5■□□□□ 0.87
EXOSC4-201ENST00000316052 WDR19Q8NEZ3 1342 aa20.5■□□□□ 0.87
EXOSC4-201ENST00000316052 REV3LO60673 3130 aa20.49■□□□□ 0.87
EXOSC4-201ENST00000316052 ZNF213O14771 459 aa20.49■□□□□ 0.87
EXOSC4-201ENST00000316052 FGBP02675 491 aa20.49■□□□□ 0.87
EXOSC4-201ENST00000316052 MFAP1P55081 439 aaKnown RBP20.49■□□□□ 0.87
EXOSC4-201ENST00000316052 ESR2Q92731 530 aa20.49■□□□□ 0.87
EXOSC4-201ENST00000316052 ALDH8A1Q9H2A2 487 aaPredicted RBP20.49■□□□□ 0.87
EXOSC4-201ENST00000316052 EDNRBP24530 442 aa20.48■□□□□ 0.87
EXOSC4-201ENST00000316052 PURAQ00577 322 aaKnown RBP20.48■□□□□ 0.87
EXOSC4-201ENST00000316052 DGKHQ86XP1 1220 aa20.48■□□□□ 0.87
EXOSC4-201ENST00000316052 USP38Q8NB14 1042 aa20.48■□□□□ 0.87
EXOSC4-201ENST00000316052 TBC1D5Q92609 795 aa20.48■□□□□ 0.87
EXOSC4-201ENST00000316052 COPS5Q92905 334 aa20.48■□□□□ 0.87
EXOSC4-201ENST00000316052 TRMT13Q9NUP7 481 aaKnown RBP20.48■□□□□ 0.87
EXOSC4-201ENST00000316052 PNMA2Q9UL42 364 aa20.48■□□□□ 0.87
EXOSC4-201ENST00000316052 SCN10AQ9Y5Y9 1956 aa20.48■□□□□ 0.87
EXOSC4-201ENST00000316052 MUC3AQ02505 3323 aa20.48■□□□□ 0.87
EXOSC4-201ENST00000316052 GBF1Q92538 1859 aa20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 TRANK1O15050 2925 aa20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 KDM4AO75164 1064 aa20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 MYL3P08590 195 aa20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 PDE4DQ08499 809 aa20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 USH1GQ495M9 461 aa20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 GPATCH4Q5T3I0 446 aaKnown RBP20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 OTOP2Q7RTS6 562 aa20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 OR6J1Q8NGC5 347 aa20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 EXOC6Q8TAG9 804 aa20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 PPP1R13LQ8WUF5 828 aa20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 SCLYQ96I15 445 aa20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 YTHDC1Q96MU7 727 aaKnown RBP20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 POLR3EQ9NVU0 708 aa20.47■□□□□ 0.87
EXOSC4-201ENST00000316052 LAMA4Q16363 1823 aa20.46■□□□□ 0.87
EXOSC4-201ENST00000316052 B4E1Z4 1266 aa20.46■□□□□ 0.87
EXOSC4-201ENST00000316052 CYP2C9P11712 490 aa20.46■□□□□ 0.87
EXOSC4-201ENST00000316052 CPT1AP50416 773 aa20.46■□□□□ 0.87
EXOSC4-201ENST00000316052 PNMA1Q8ND90 353 aa20.46■□□□□ 0.87
EXOSC4-201ENST00000316052 RGS22Q8NE09 1264 aa20.46■□□□□ 0.87
EXOSC4-201ENST00000316052 DNERQ8NFT8 737 aa20.46■□□□□ 0.87
EXOSC4-201ENST00000316052 ANKS1AQ92625 1134 aa20.46■□□□□ 0.87
EXOSC4-201ENST00000316052 SCN5AQ14524 2016 aa20.45■□□□□ 0.86
EXOSC4-201ENST00000316052 NBPF20Q3BBV1 942 aa20.45■□□□□ 0.86
EXOSC4-201ENST00000316052 SCFD2Q8WU76 684 aa20.45■□□□□ 0.86
EXOSC4-201ENST00000316052 MTG1Q9BT17 334 aaPredicted RBP20.45■□□□□ 0.86
EXOSC4-201ENST00000316052 PRDM12Q9H4Q4 367 aa20.45■□□□□ 0.86
EXOSC4-201ENST00000316052 DIAPH3Q9NSV4 1193 aa20.45■□□□□ 0.86
EXOSC4-201ENST00000316052 ZSWIM5Q9P217 1185 aa20.45■□□□□ 0.86
EXOSC4-201ENST00000316052 MYH6P13533 1939 aa20.45■□□□□ 0.86
EXOSC4-201ENST00000316052 A6NJR5 290 aa20.44■□□□□ 0.86
EXOSC4-201ENST00000316052 ARIH2O95376 493 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms