RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 KRT25Q7Z3Z0 450 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 CNBD1Q8NA66 436 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 UIMC1Q96RL1 719 aa16.91■□□□□ 0.3
CSDC2-201ENST00000306149 LAD1O00515 517 aa16.9■□□□□ 0.3
CSDC2-201ENST00000306149 CCNE1P24864 410 aa16.9■□□□□ 0.3
CSDC2-201ENST00000306149 DYMQ7RTS9 669 aa16.9■□□□□ 0.3
CSDC2-201ENST00000306149 KIAA1328Q86T90 577 aa16.9■□□□□ 0.3
CSDC2-201ENST00000306149 DHTKD1Q96HY7 919 aaPredicted RBP16.9■□□□□ 0.3
CSDC2-201ENST00000306149 NOC4LQ9BVI4 516 aaKnown RBP16.9■□□□□ 0.3
CSDC2-201ENST00000306149 SPZ1Q9BXG8 430 aa16.9■□□□□ 0.3
CSDC2-201ENST00000306149 SEC63Q9UGP8 760 aaKnown RBP16.9■□□□□ 0.3
CSDC2-201ENST00000306149 SNED1Q8TER0 1413 aa16.9■□□□□ 0.3
CSDC2-201ENST00000306149 TUBBP07437 444 aa16.9■□□□□ 0.3
CSDC2-201ENST00000306149 C16orf86Q6ZW13 317 aa16.9■□□□□ 0.3
CSDC2-201ENST00000306149 KIAA0895Q8NCT3 520 aa16.9■□□□□ 0.3
CSDC2-201ENST00000306149 NEDD1Q8NHV4 660 aa16.9■□□□□ 0.3
CSDC2-201ENST00000306149 TULP2O00295 520 aa16.89■□□□□ 0.3
CSDC2-201ENST00000306149 PLEKP08567 350 aaPredicted RBP16.89■□□□□ 0.3
CSDC2-201ENST00000306149 MFSD14BQ5SR56 506 aa16.89■□□□□ 0.3
CSDC2-201ENST00000306149 TRAPPC3LQ5T215 181 aa16.89■□□□□ 0.3
CSDC2-201ENST00000306149 FAM196AQ6ZSG2 479 aa16.89■□□□□ 0.3
CSDC2-201ENST00000306149 LRRC47Q8N1G4 583 aaKnown RBP16.89■□□□□ 0.3
CSDC2-201ENST00000306149 MMS19Q96T76 1030 aa16.89■□□□□ 0.3
CSDC2-201ENST00000306149 SEMA6BQ9H3T3 888 aa16.89■□□□□ 0.3
CSDC2-201ENST00000306149 NHEJ1Q9H9Q4 299 aaPredicted RBP16.89■□□□□ 0.3
CSDC2-201ENST00000306149 L1RE1Q9UN81 338 aa16.89■□□□□ 0.3
CSDC2-201ENST00000306149 MYL1P05976 194 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 GNA11P29992 359 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 PICALMQ13492 652 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 MIIPQ5JXC2 388 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 REXO1Q8N1G1 1221 aaKnown RBP16.89■□□□□ 0.29
CSDC2-201ENST00000306149 GJA10Q969M2 543 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 HINFPQ9BQA5 517 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 LZTS2Q9BRK4 669 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 TTYH3Q9C0H2 523 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 GBP3Q9H0R5 595 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 HAUS4Q9H6D7 363 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 MACROD2A1Z1Q3 448 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 EIF3JO75822 258 aaKnown RBP16.89■□□□□ 0.29
CSDC2-201ENST00000306149 TDP2O95551 362 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 KRT26Q7Z3Y9 468 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 AK8Q96MA6 479 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 ADAM21Q9UKJ8 722 aa16.89■□□□□ 0.29
CSDC2-201ENST00000306149 GPR75-ASB3A0A0A6YYF3 556 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 POTEMA6NI47 508 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 SLC37A4O43826 429 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 RHBDL3P58872 404 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 TRAPPC11Q7Z392 1133 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 RPGRQ92834 1020 aaKnown RBP16.88■□□□□ 0.29
CSDC2-201ENST00000306149 JAKMIP2Q96AA8 810 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 C7orf25Q9BPX7 421 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 ZNF287Q9HBT7 754 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 SBF2Q86WG5 1849 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 MYMKA6NI61 221 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 F8W031 263 aaPredicted RBP16.88■□□□□ 0.29
CSDC2-201ENST00000306149 ZNF185O15231 689 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 TMED8Q6PL24 325 aaPredicted RBP16.88■□□□□ 0.29
CSDC2-201ENST00000306149 CCDC47Q96A33 483 aaKnown RBP16.88■□□□□ 0.29
CSDC2-201ENST00000306149 NUDT12Q9BQG2 462 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 GPCPD1Q9NPB8 672 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 LRWD1Q9UFC0 647 aa16.88■□□□□ 0.29
CSDC2-201ENST00000306149 EPHB6O15197 1021 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 RGL2O15211 777 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 PHACTR2O75167 634 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 ZMYND10O75800 440 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 GRB10Q13322 594 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 PRR5LQ6MZQ0 368 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 GLIS3Q8NEA6 775 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 NAV1Q8NEY1 1877 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 SMCR8Q8TEV9 937 aaPredicted RBP16.87■□□□□ 0.29
CSDC2-201ENST00000306149 CALML4Q96GE6 196 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 TRERF1Q96PN7 1200 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 FAM207AQ9NSI2 230 aaPredicted RBP16.87■□□□□ 0.29
CSDC2-201ENST00000306149 ZNHIT6Q9NWK9 470 aaKnown RBP16.87■□□□□ 0.29
CSDC2-201ENST00000306149 BICDL2A1A5D9 508 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 PSMD14O00487 310 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 SLURP2P0DP57 97 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 IDEP14735 1019 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 ATP2B2Q01814 1243 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 SEMA3FQ13275 785 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 LRRC41Q15345 812 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 MEA1Q16626 185 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 GDAP1L1Q96MZ0 367 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 CUEDC2Q9H467 287 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 BLOC1S4Q9NUP1 217 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 VPS18Q9P253 973 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 SAR1BQ9Y6B6 198 aa16.87■□□□□ 0.29
CSDC2-201ENST00000306149 EDIL3O43854 480 aa16.86■□□□□ 0.29
CSDC2-201ENST00000306149 CALCRLQ16602 461 aa16.86■□□□□ 0.29
CSDC2-201ENST00000306149 WDR93Q6P2C0 686 aa16.86■□□□□ 0.29
CSDC2-201ENST00000306149 ZNF831Q5JPB2 1677 aa16.86■□□□□ 0.29
CSDC2-201ENST00000306149 COL24A1Q17RW2 1714 aa16.86■□□□□ 0.29
CSDC2-201ENST00000306149 ZNF263O14978 683 aa16.86■□□□□ 0.29
CSDC2-201ENST00000306149 KRT83P78385 493 aa16.86■□□□□ 0.29
CSDC2-201ENST00000306149 IRX5P78411 483 aaPredicted RBP16.86■□□□□ 0.29
CSDC2-201ENST00000306149 ZBED6P86452 979 aa16.86■□□□□ 0.29
CSDC2-201ENST00000306149 CASP8Q14790 479 aa16.86■□□□□ 0.29
CSDC2-201ENST00000306149 SV2BQ7L1I2 683 aa16.86■□□□□ 0.29
CSDC2-201ENST00000306149 NOC3LQ8WTT2 800 aaKnown RBP16.86■□□□□ 0.29
CSDC2-201ENST00000306149 PNMA5Q96PV4 448 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms