RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 V9GY48 417 aaPredicted RBP6.55□□□□□ -1.36
PATL1-201ENST00000300146 OTOFQ9HC10 1997 aa6.55□□□□□ -1.36
PATL1-201ENST00000300146 CDC45O75419 566 aa6.55□□□□□ -1.36
PATL1-201ENST00000300146 CYBAP13498 195 aa6.55□□□□□ -1.36
PATL1-201ENST00000300146 IGFBP4P22692 258 aa6.55□□□□□ -1.36
PATL1-201ENST00000300146 ZNF76P36508 570 aa6.55□□□□□ -1.36
PATL1-201ENST00000300146 AKAP17AQ02040 695 aaKnown RBP6.55□□□□□ -1.36
PATL1-201ENST00000300146 CCDC85BQ15834 202 aaPredicted RBP6.55□□□□□ -1.36
PATL1-201ENST00000300146 RNF20Q5VTR2 975 aa6.55□□□□□ -1.36
PATL1-201ENST00000300146 ZNF654Q8IZM8 581 aa6.55□□□□□ -1.36
PATL1-201ENST00000300146 ABHD16BQ9H3Z7 469 aa6.55□□□□□ -1.36
PATL1-201ENST00000300146 BCAS3Q9H6U6 928 aa6.55□□□□□ -1.36
PATL1-201ENST00000300146 JMJD4Q9H9V9 463 aa6.55□□□□□ -1.36
PATL1-201ENST00000300146 MLXIPQ9HAP2 919 aa6.55□□□□□ -1.36
PATL1-201ENST00000300146 CASTP20810 708 aaKnown RBP6.54□□□□□ -1.36
PATL1-201ENST00000300146 MCM5P33992 734 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 PPP2R5BQ15173 497 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 ALX1Q15699 326 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 C9orf50Q5SZB4 431 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 CHST13Q8NET6 341 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 DCAF4Q8WV16 495 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 AFG1LQ8WV93 481 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 MKL1Q969V6 931 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 NEK1Q96PY6 1258 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 ADD3Q9UEY8 706 aaKnown RBP6.54□□□□□ -1.36
PATL1-201ENST00000300146 ZNF536O15090 1300 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 IGKV6D-41A0A0C4DH26 115 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 GOLGA8AA7E2F4 631 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 GOLGA8BA8MQT2 603 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 ICAM1P05362 532 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 CTSHP09668 335 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 SMPD1P17405 629 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 ADD1P35611 737 aaKnown RBP6.54□□□□□ -1.36
PATL1-201ENST00000300146 ACLYP53396 1101 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 AAMPQ13685 434 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 FSCN1Q16658 493 aaKnown RBP6.54□□□□□ -1.36
PATL1-201ENST00000300146 ZNF792Q3KQV3 632 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 TPRNQ4KMQ1 711 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 JAKMIP3Q5VZ66 844 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 PHKBQ93100 1093 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 ZNF668Q96K58 619 aaPredicted RBP6.54□□□□□ -1.36
PATL1-201ENST00000300146 OSBPL3Q9H4L5 887 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 NOP56O00567 594 aaKnown RBP6.54□□□□□ -1.36
PATL1-201ENST00000300146 GPATCH4Q5T3I0 446 aaKnown RBP6.54□□□□□ -1.36
PATL1-201ENST00000300146 TMED8Q6PL24 325 aaPredicted RBP6.54□□□□□ -1.36
PATL1-201ENST00000300146 TMCO2Q7Z6W1 182 aaPredicted RBP6.54□□□□□ -1.36
PATL1-201ENST00000300146 GMCL1P1Q8NEA9 526 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 USP6NLQ92738 828 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 AMNQ9BXJ7 453 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 TRMT13Q9NUP7 481 aaKnown RBP6.54□□□□□ -1.36
PATL1-201ENST00000300146 CDK5RAP2Q96SN8 1893 aa6.54□□□□□ -1.36
PATL1-201ENST00000300146 A0A1W2PQ45 241 aaPredicted RBP6.53□□□□□ -1.36
PATL1-201ENST00000300146 A0A1W2PQY0 241 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 ASB14A6NK59 587 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 CPLX1O14810 134 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 UPP2O95045 317 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 ZNF286BP0CG31 522 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 SLC39A5Q6ZMH5 540 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 DGKHQ86XP1 1220 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 DEFB123Q8N688 67 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 SHCBP1Q8NEM2 672 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 REPS2Q8NFH8 660 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 GMCL1Q96IK5 515 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 OGDHLQ9ULD0 1010 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 UNC80Q8N2C7 3258 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 UMODL1Q5DID0 1318 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 SOX1O00570 391 aaPredicted RBP6.53□□□□□ -1.36
PATL1-201ENST00000300146 MSCO60682 206 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 ZNF865P0CJ78 1059 aaPredicted RBP6.53□□□□□ -1.36
PATL1-201ENST00000300146 CSF2RAP15509 400 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 NAPAP54920 295 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 PPP4R3BQ5MIZ7 849 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 RASGRP4Q8TDF6 673 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 CUL5Q93034 780 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 TCEAL9Q9UHQ7 104 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 MRPL11Q9Y3B7 192 aaKnown RBP6.53□□□□□ -1.36
PATL1-201ENST00000300146 SYNRGQ9UMZ2 1314 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 NR3C2P08235 984 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 ALDH5A1P51649 535 aaPredicted RBP6.53□□□□□ -1.36
PATL1-201ENST00000300146 ANTXR2P58335 489 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 SHHQ15465 462 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 BRDTQ58F21 947 aaPredicted RBP6.53□□□□□ -1.36
PATL1-201ENST00000300146 BLOC1S2Q6QNY1 142 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 Q6ZUG5 572 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 TRIM50Q86XT4 487 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 RRP36Q96EU6 259 aaKnown RBP6.53□□□□□ -1.36
PATL1-201ENST00000300146 RNPC3Q96LT9 517 aaKnown RBP6.53□□□□□ -1.36
PATL1-201ENST00000300146 COL20A1Q9P218 1284 aa6.53□□□□□ -1.36
PATL1-201ENST00000300146 GCOM1H8Y6P7 765 aaPredicted RBP6.52□□□□□ -1.37
PATL1-201ENST00000300146 MARCH6O60337 910 aa6.52□□□□□ -1.37
PATL1-201ENST00000300146 POLR2MP0CAP2 368 aa6.52□□□□□ -1.37
PATL1-201ENST00000300146 ITGB8P26012 769 aa6.52□□□□□ -1.37
PATL1-201ENST00000300146 TRMT44Q8IYL2 757 aaKnown RBP6.52□□□□□ -1.37
PATL1-201ENST00000300146 IL31RAQ8NI17 732 aa6.52□□□□□ -1.37
PATL1-201ENST00000300146 MAP4K1Q92918 833 aa6.52□□□□□ -1.37
PATL1-201ENST00000300146 TTC14Q96N46 770 aa6.52□□□□□ -1.37
PATL1-201ENST00000300146 ANAPC4Q9UJX5 808 aa6.52□□□□□ -1.37
PATL1-201ENST00000300146 ABCB11O95342 1321 aa6.52□□□□□ -1.37
PATL1-201ENST00000300146 ZBTB43O43298 467 aa6.52□□□□□ -1.37
PATL1-201ENST00000300146 HOXC6P09630 235 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms