RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 CBX8Q9HC52 389 aa25.88■■□□□ 1.73
PTX3-201ENST00000295927 PAPPA2Q9BXP8 1791 aa25.88■■□□□ 1.73
PTX3-201ENST00000295927 PIK3CDO00329 1044 aa25.88■■□□□ 1.73
PTX3-201ENST00000295927 CAVIN2O95810 425 aa25.88■■□□□ 1.73
PTX3-201ENST00000295927 FOSP01100 380 aaPredicted RBP25.88■■□□□ 1.73
PTX3-201ENST00000295927 C11orf57Q6ZUT1 292 aaPredicted RBP25.88■■□□□ 1.73
PTX3-201ENST00000295927 MRPL11Q9Y3B7 192 aaKnown RBP25.88■■□□□ 1.73
PTX3-201ENST00000295927 OTOFQ9HC10 1997 aa25.88■■□□□ 1.73
PTX3-201ENST00000295927 FLOT1O75955 427 aa25.87■■□□□ 1.73
PTX3-201ENST00000295927 SLFN14P0C7P3 912 aa25.87■■□□□ 1.73
PTX3-201ENST00000295927 GCFC2P16383 781 aaKnown RBP25.87■■□□□ 1.73
PTX3-201ENST00000295927 HOXA13P31271 388 aaPredicted RBP25.87■■□□□ 1.73
PTX3-201ENST00000295927 ZNF165P49910 485 aa25.87■■□□□ 1.73
PTX3-201ENST00000295927 USP11P51784 963 aa25.87■■□□□ 1.73
PTX3-201ENST00000295927 POSTNQ15063 836 aa25.87■■□□□ 1.73
PTX3-201ENST00000295927 ZRSR1Q15695 479 aaKnown RBP25.87■■□□□ 1.73
PTX3-201ENST00000295927 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.87■■□□□ 1.73
PTX3-201ENST00000295927 NAP1L4Q99733 375 aaKnown RBP25.87■■□□□ 1.73
PTX3-201ENST00000295927 USP25Q9UHP3 1055 aa25.87■■□□□ 1.73
PTX3-201ENST00000295927 SPDYE3A6NKU9 549 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 PP2D1A8MPX8 630 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 BIN1O00499 593 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 TXLNAP40222 546 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 MAP3K9P80192 1104 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 TEX2Q8IWB9 1127 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 C12orf42Q96LP6 360 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 DDX25Q9UHL0 483 aaKnown RBP25.86■■□□□ 1.73
PTX3-201ENST00000295927 ZNF536O15090 1300 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 ABCB11O95342 1321 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 C19orf81C9J6K1 198 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 PPP1R12BO60237 982 aaPredicted RBP25.86■■□□□ 1.73
PTX3-201ENST00000295927 ICAM1P05362 532 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 HMGCS2P54868 508 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 E2F4Q16254 413 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 LUZP1Q86V48 1076 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 GRAMD1CQ8IYS0 662 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 CEP57L1Q8IYX8 460 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 CRYGNQ8WXF5 182 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 AK8Q96MA6 479 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 AGBL1Q96MI9 1066 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 PYM1Q9BRP8 204 aaKnown RBP25.86■■□□□ 1.73
PTX3-201ENST00000295927 PPP1R9AQ9ULJ8 1098 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 PCDHA5Q9Y5H7 936 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 SNCAIPQ9Y6H5 919 aa25.86■■□□□ 1.73
PTX3-201ENST00000295927 CFBP00751 764 aa25.85■■□□□ 1.73
PTX3-201ENST00000295927 PRR29P0C7W0 189 aa25.85■■□□□ 1.73
PTX3-201ENST00000295927 TXKP42681 527 aa25.85■■□□□ 1.73
PTX3-201ENST00000295927 NLRP12P59046 1061 aa25.85■■□□□ 1.73
PTX3-201ENST00000295927 VGLL4Q14135 290 aa25.85■■□□□ 1.73
PTX3-201ENST00000295927 IQUBQ8NA54 791 aa25.85■■□□□ 1.73
PTX3-201ENST00000295927 TBC1D5Q92609 795 aa25.85■■□□□ 1.73
PTX3-201ENST00000295927 TAF1DQ9H5J8 278 aaPredicted RBP25.85■■□□□ 1.73
PTX3-201ENST00000295927 CCPG1Q9ULG6 757 aa25.85■■□□□ 1.73
PTX3-201ENST00000295927 AFG3L2Q9Y4W6 797 aa25.85■■□□□ 1.73
PTX3-201ENST00000295927 TECP42680 631 aa25.84■■□□□ 1.73
PTX3-201ENST00000295927 ARHGAP4P98171 946 aa25.84■■□□□ 1.73
PTX3-201ENST00000295927 CCDC34Q96HJ3 373 aa25.84■■□□□ 1.73
PTX3-201ENST00000295927 CCSER1Q9C0I3 900 aa25.84■■□□□ 1.73
PTX3-201ENST00000295927 SLC38A10Q9HBR0 1119 aa25.84■■□□□ 1.73
PTX3-201ENST00000295927 WDR90Q96KV7 1748 aa25.84■■□□□ 1.73
PTX3-201ENST00000295927 SREBF1P36956 1147 aa25.84■■□□□ 1.73
PTX3-201ENST00000295927 UBA7P41226 1012 aa25.84■■□□□ 1.73
PTX3-201ENST00000295927 KARSQ15046 597 aaKnown RBP25.84■■□□□ 1.73
PTX3-201ENST00000295927 DPCR1Q3MIW9 517 aa25.84■■□□□ 1.73
PTX3-201ENST00000295927 SH3RF1Q7Z6J0 888 aa25.84■■□□□ 1.73
PTX3-201ENST00000295927 CDCA5Q96FF9 252 aa25.84■■□□□ 1.73
PTX3-201ENST00000295927 PAGE5Q96GU1 130 aa25.84■■□□□ 1.73
PTX3-201ENST00000295927 RLFQ13129 1914 aa25.83■■□□□ 1.73
PTX3-201ENST00000295927 CYP3A7-CYP3A51PA0A087WV96 503 aa25.83■■□□□ 1.73
PTX3-201ENST00000295927 GCOM1H8Y6P7 765 aaPredicted RBP25.83■■□□□ 1.73
PTX3-201ENST00000295927 POLR2MP0CAP2 368 aa25.83■■□□□ 1.73
PTX3-201ENST00000295927 CYP3A7P24462 503 aa25.83■■□□□ 1.73
PTX3-201ENST00000295927 CCDC173Q0VFZ6 552 aa25.83■■□□□ 1.73
PTX3-201ENST00000295927 EAPPQ56P03 285 aaPredicted RBP25.83■■□□□ 1.73
PTX3-201ENST00000295927 ISM2Q6H9L7 571 aa25.83■■□□□ 1.73
PTX3-201ENST00000295927 IGSF22Q8N9C0 903 aa25.83■■□□□ 1.73
PTX3-201ENST00000295927 IQCA1LA6NCM1 817 aa25.82■■□□□ 1.72
PTX3-201ENST00000295927 POTECB2RU33 542 aa25.82■■□□□ 1.72
PTX3-201ENST00000295927 FXR2P51116 673 aaKnown RBP eCLIP25.82■■□□□ 1.72
PTX3-201ENST00000295927 MOXD1Q6UVY6 613 aa25.82■■□□□ 1.72
PTX3-201ENST00000295927 FCHSD1Q86WN1 690 aa25.82■■□□□ 1.72
PTX3-201ENST00000295927 MBOAT7Q96N66 472 aa25.82■■□□□ 1.72
PTX3-201ENST00000295927 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.82■■□□□ 1.72
PTX3-201ENST00000295927 AFMP43652 599 aa25.82■■□□□ 1.72
PTX3-201ENST00000295927 IQCB1Q15051 598 aa25.82■■□□□ 1.72
PTX3-201ENST00000295927 PDXDC2PQ6P474 469 aa25.82■■□□□ 1.72
PTX3-201ENST00000295927 CPXCR1Q8N123 301 aa25.82■■□□□ 1.72
PTX3-201ENST00000295927 PPP1R9BQ96SB3 815 aa25.82■■□□□ 1.72
PTX3-201ENST00000295927 DISC1Q9NRI5 854 aa25.82■■□□□ 1.72
PTX3-201ENST00000295927 CSADQ9Y600 493 aa25.82■■□□□ 1.72
PTX3-201ENST00000295927 IREB2P48200 963 aaKnown RBP25.81■■□□□ 1.72
PTX3-201ENST00000295927 NT5DC1Q5TFE4 455 aa25.81■■□□□ 1.72
PTX3-201ENST00000295927 HAS1Q92839 578 aa25.81■■□□□ 1.72
PTX3-201ENST00000295927 RAVER2Q9HCJ3 691 aaKnown RBP25.81■■□□□ 1.72
PTX3-201ENST00000295927 TMOD4Q9NZQ9 345 aa25.81■■□□□ 1.72
PTX3-201ENST00000295927 PTPRFP10586 1907 aa25.81■■□□□ 1.72
PTX3-201ENST00000295927 ZBED4O75132 1171 aa25.8■■□□□ 1.72
PTX3-201ENST00000295927 NF2P35240 595 aa25.8■■□□□ 1.72
PTX3-201ENST00000295927 STAT6P42226 847 aa25.8■■□□□ 1.72
PTX3-201ENST00000295927 SARSP49591 514 aaKnown RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms