RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 OTUD7AQ8TE49 926 aaPredicted RBP11.07□□□□□ -0.64
CNOT9-202ENST00000295701 NUP133Q8WUM0 1156 aa11.07□□□□□ -0.64
CNOT9-202ENST00000295701 MKL1Q969V6 931 aa11.07□□□□□ -0.64
CNOT9-202ENST00000295701 VTI1AQ96AJ9 217 aa11.07□□□□□ -0.64
CNOT9-202ENST00000295701 TOX2Q96NM4 488 aa11.07□□□□□ -0.64
CNOT9-202ENST00000295701 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.07□□□□□ -0.642e-7■■■■□ 26.5
CNOT9-202ENST00000295701 KATNBL1Q9H079 304 aa11.07□□□□□ -0.64
CNOT9-202ENST00000295701 DCTPP1Q9H773 170 aa11.07□□□□□ -0.64
CNOT9-202ENST00000295701 FEM1BQ9UK73 627 aa11.07□□□□□ -0.64
CNOT9-202ENST00000295701 TBX21Q9UL17 535 aa11.07□□□□□ -0.64
CNOT9-202ENST00000295701 CTDP1Q9Y5B0 961 aaPredicted RBP11.07□□□□□ -0.64
CNOT9-202ENST00000295701 GBF1Q92538 1859 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 MOXD2PA6NHM9 499 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 PATL2C9JE40 543 aaKnown RBP11.06□□□□□ -0.64
CNOT9-202ENST00000295701 TMEM232C9JQI7 657 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 ATP2A1O14983 1001 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 BMP3P12645 472 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 FOSL2P15408 326 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 GJA9P57773 515 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 GNASQ5JWF2 1037 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 TMEM240Q5SV17 173 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 TMEM63BQ5T3F8 832 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 ARMCX2Q7L311 632 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 RASGRP2Q7LDG7 609 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 MSL3Q8N5Y2 521 aaKnown RBP11.06□□□□□ -0.64
CNOT9-202ENST00000295701 AGBL1Q96MI9 1066 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 PPP1R12CQ9BZL4 782 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 CHMP4BQ9H444 224 aaKnown RBP11.06□□□□□ -0.64
CNOT9-202ENST00000295701 PRDM6Q9NQX0 595 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 ASTN1O14525 1302 aa11.06□□□□□ -0.64
CNOT9-202ENST00000295701 LCTP09848 1927 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.05□□□□□ -0.64
CNOT9-202ENST00000295701 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.05□□□□□ -0.64
CNOT9-202ENST00000295701 ARVCFO00192 962 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 TTLL1O95922 423 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 CSF2RAP15509 400 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 MCCP23508 829 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 DNAJB2P25686 324 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 CST5P28325 142 aaPredicted RBP11.05□□□□□ -0.64
CNOT9-202ENST00000295701 TFAP4Q01664 338 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 TJAP1Q5JTD0 557 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 MFSD5Q6N075 450 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 CCDC129Q6ZRS4 1044 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.05□□□□□ -0.64
CNOT9-202ENST00000295701 GMCL1P1Q8NEA9 526 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 CHST13Q8NET6 341 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 NEDD1Q8NHV4 660 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 GLT1D1Q96MS3 346 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 PURBQ96QR8 312 aaKnown RBP11.05□□□□□ -0.64
CNOT9-202ENST00000295701 UPF3AQ9H1J1 476 aaKnown RBP11.05□□□□□ -0.64
CNOT9-202ENST00000295701 ABHD16BQ9H3Z7 469 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 ISY1Q9ULR0 285 aaKnown RBP11.05□□□□□ -0.64
CNOT9-202ENST00000295701 ZNF536O15090 1300 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 ELP1O95163 1332 aa11.05□□□□□ -0.64
CNOT9-202ENST00000295701 FOXP2O15409 715 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 NMT2O60551 498 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 TSPY3P0CV98 308 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 TSPY8P0CW00 308 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 GNAT2P19087 354 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 CYP2C18P33260 490 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 CTDSPL2Q05D32 466 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 ZNF365Q70YC5 407 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 KCTD1Q719H9 257 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 FAM133AQ8N9E0 248 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 PI4K2BQ8TCG2 481 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 A1CFQ9NQ94 594 aaKnown RBP11.04□□□□□ -0.64
CNOT9-202ENST00000295701 PDGFCQ9NRA1 345 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 MTMR7Q9Y216 660 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 UMODL1Q5DID0 1318 aa11.04□□□□□ -0.64
CNOT9-202ENST00000295701 CHD9Q3L8U1 2897 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 A0A0U1RQG5 324 aaPredicted RBP11.03□□□□□ -0.64
CNOT9-202ENST00000295701 CD4P01730 458 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 ZFYP08048 801 aaPredicted RBP11.03□□□□□ -0.64
CNOT9-202ENST00000295701 ALAS1P13196 640 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 TNFAIP2Q03169 654 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 PPARAQ07869 468 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 MUM1L1Q5H9M0 696 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 ZMYM1Q5SVZ6 1142 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 CCDC174Q6PII3 467 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 CXCL17Q6UXB2 119 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 NOL8Q76FK4 1167 aaKnown RBP11.03□□□□□ -0.64
CNOT9-202ENST00000295701 EEPD1Q7L9B9 569 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 FAM126BQ8IXS8 530 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 PCSK9Q8NBP7 692 aaKnown RBP11.03□□□□□ -0.64
CNOT9-202ENST00000295701 STAG1Q8WVM7 1258 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 PPM1EQ8WY54 764 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 TIFAQ96CG3 184 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 GPATCH3Q96I76 525 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 TRERF1Q96PN7 1200 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 MTRQ99707 1265 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 PBX4Q9BYU1 374 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 NAPBQ9H115 298 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 ZNF576Q9H609 170 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 ACAD9Q9H845 621 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 SPC25Q9HBM1 224 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 IL17RBQ9NRM6 502 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 RNF146Q9NTX7 359 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 PCDHB15Q9Y5E8 787 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 ADGRG1Q9Y653 693 aa11.03□□□□□ -0.64
CNOT9-202ENST00000295701 GRIN2DO15399 1336 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms