RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ADD3Q9UEY8 706 aaKnown RBP18.94■□□□□ 0.62
SHANK1-201ENST00000293441 FEZ2Q9UHY8 353 aaPredicted RBP18.94■□□□□ 0.62
SHANK1-201ENST00000293441 MTMR6Q9Y217 621 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 USP17L8P0C7I0 530 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 BMP3P12645 472 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 MTMR3Q13615 1198 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 ATP6V0A1Q93050 837 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 LSG1Q9H089 658 aaKnown RBP18.94■□□□□ 0.62
SHANK1-201ENST00000293441 TMEM63CQ9P1W3 806 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 SAR1BQ9Y6B6 198 aa18.94■□□□□ 0.62
SHANK1-201ENST00000293441 INO80B-WBP1J3KQ70 363 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 FMNL1O95466 1100 aaPredicted RBP18.93■□□□□ 0.62
SHANK1-201ENST00000293441 CAPN12Q6ZSI9 719 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 ANKRD36BP1Q96IX9 119 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 PIGSQ96S52 555 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 INO80BQ9C086 356 aaPredicted RBP18.93■□□□□ 0.62
SHANK1-201ENST00000293441 SERPINB13Q9UIV8 391 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 IGSF1Q8N6C5 1336 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 CROCCP2Q86T23 111 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 RPUSD2Q8IZ73 545 aaKnown RBP18.93■□□□□ 0.62
SHANK1-201ENST00000293441 METTL14Q9HCE5 456 aaKnown RBP18.93■□□□□ 0.62
SHANK1-201ENST00000293441 USP17L3A6NCW0 530 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 USP17L4A6NCW7 530 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 USP17L1Q7RTZ2 530 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 COA7Q96BR5 231 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 CCDC94Q9BW85 323 aaPredicted RBP18.93■□□□□ 0.62
SHANK1-201ENST00000293441 USP6P35125 1406 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 ROBO2Q9HCK4 1378 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 ATP7BP35670 1465 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 ZNF589Q86UQ0 364 aaPredicted RBP18.93■□□□□ 0.62
SHANK1-201ENST00000293441 ANKRD42Q8N9B4 389 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 HAUS1Q96CS2 278 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 PPP1R16BQ96T49 567 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 KANSL2Q9H9L4 492 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 SYDE2Q5VT97 1194 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 DYNLL2Q96FJ2 89 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 RILPQ96NA2 401 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 GPR108Q9NPR9 543 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 KMT5AQ9NQR1 393 aa18.93■□□□□ 0.62
SHANK1-201ENST00000293441 TRIM58Q8NG06 486 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 PIGBQ92521 554 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 PI16Q6UXB8 463 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 B4GALNT4Q76KP1 1039 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 GDAP1L1Q96MZ0 367 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 AATKQ6ZMQ8 1374 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 SOS2Q07890 1332 aaPredicted RBP18.92■□□□□ 0.62
SHANK1-201ENST00000293441 CACNB1Q02641 598 aaPredicted RBP18.92■□□□□ 0.62
SHANK1-201ENST00000293441 ADCK5Q3MIX3 580 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 PDZD4Q76G19 769 aaPredicted RBP18.92■□□□□ 0.62
SHANK1-201ENST00000293441 CACYBPQ9HB71 228 aaKnown RBP18.92■□□□□ 0.62
SHANK1-201ENST00000293441 RIC8AQ9NPQ8 531 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 PLCB4Q15147 1175 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 GRK7Q8WTQ7 553 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 SLC7A3Q8WY07 619 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 MCUR1Q96AQ8 359 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 DDX41Q9UJV9 622 aaKnown RBP18.92■□□□□ 0.62
SHANK1-201ENST00000293441 HEG1Q9ULI3 1381 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 PPP2R5AQ15172 486 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 EXOC3L4Q17RC7 722 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 PI4K2BQ8TCG2 481 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 PRPF31Q8WWY3 499 aaKnown RBP18.92■□□□□ 0.62
SHANK1-201ENST00000293441 MIS12Q9H081 205 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 FANCLQ9NW38 375 aa18.92■□□□□ 0.62
SHANK1-201ENST00000293441 MEIS1O00470 390 aa18.91■□□□□ 0.62
SHANK1-201ENST00000293441 RNASELQ05823 741 aaKnown RBP18.91■□□□□ 0.62
SHANK1-201ENST00000293441 NLRP7Q8WX94 980 aa18.91■□□□□ 0.62
SHANK1-201ENST00000293441 TTC31Q49AM3 519 aaPredicted RBP18.91■□□□□ 0.62
SHANK1-201ENST00000293441 NPR1P16066 1061 aa18.91■□□□□ 0.62
SHANK1-201ENST00000293441 SNAP25P60880 206 aa18.91■□□□□ 0.62
SHANK1-201ENST00000293441 KRT71Q3SY84 523 aa18.91■□□□□ 0.62
SHANK1-201ENST00000293441 USP17L2Q6R6M4 530 aa18.91■□□□□ 0.62
SHANK1-201ENST00000293441 VSIG1Q86XK7 387 aa18.91■□□□□ 0.62
SHANK1-201ENST00000293441 XPOTO43592 962 aaKnown RBP18.91■□□□□ 0.62
SHANK1-201ENST00000293441 POLR2BP30876 1174 aaKnown RBP18.91■□□□□ 0.62
SHANK1-201ENST00000293441 TBCKQ8TEA7 893 aa18.91■□□□□ 0.62
SHANK1-201ENST00000293441 LARP4BQ92615 738 aaKnown RBP18.91■□□□□ 0.62
SHANK1-201ENST00000293441 A6NJR5 290 aa18.91■□□□□ 0.62
SHANK1-201ENST00000293441 SAT1P21673 171 aa18.91■□□□□ 0.62
SHANK1-201ENST00000293441 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.91■□□□□ 0.62
SHANK1-201ENST00000293441 CNOT6LQ96LI5 555 aaKnown RBP18.91■□□□□ 0.62
SHANK1-201ENST00000293441 CIAPIN1Q6FI81 312 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 P3H4Q92791 437 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 SCYL1Q96KG9 808 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 PI4KBQ9UBF8 816 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 IREB2P48200 963 aaKnown RBP18.9■□□□□ 0.62
SHANK1-201ENST00000293441 TRIML1Q8N9V2 468 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 PRKAG2Q9UGJ0 569 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 ANKARQ7Z5J8 1434 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 THAP12O43422 761 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 RNF8O76064 485 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 PHBP35232 272 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 MECOMQ03112 1051 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 DIXDC1Q155Q3 683 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 AOC3Q16853 763 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 TTBK2Q6IQ55 1244 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 APOA5Q6Q788 366 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 CEP170P1Q96L14 293 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 CYP2D7A0A087X1C5 515 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 NSFP46459 744 aaKnown RBP18.9■□□□□ 0.62
SHANK1-201ENST00000293441 SATB1Q01826 763 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms