RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 ENOX2Q16206 610 aaKnown RBP11.16□□□□□ -0.62
HMGCR-201ENST00000287936 SAMD1Q6SPF0 538 aaPredicted RBP11.16□□□□□ -0.62
HMGCR-201ENST00000287936 CCDC17Q96LX7 622 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 PSTPIP2Q9H939 334 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 TACC3Q9Y6A5 838 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 A0A087X0B3 334 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 PP2D1A8MPX8 630 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 OPA1O60313 960 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 CAPN2P17655 700 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 TXNRD1Q16881 649 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 RRAGAQ7L523 313 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 TEKT1Q969V4 418 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 MAD2L2Q9UI95 211 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 PCDHA12Q9UN75 941 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.15□□□□□ -0.62
HMGCR-201ENST00000287936 TTC26A0AVF1 554 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 CLSTN1O94985 981 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 RASA1P20936 1047 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 RPL13P26373 211 aaKnown RBP11.15□□□□□ -0.62
HMGCR-201ENST00000287936 SLC1A4P43007 532 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 FAM26FQ5R3K3 315 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 GIMAP8Q8ND71 665 aaPredicted RBP11.15□□□□□ -0.62
HMGCR-201ENST00000287936 ZMYND12Q9H0C1 365 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 MYH7P12883 1935 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 ERLIN2O94905 339 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 HERC4Q5GLZ8 1057 aaPredicted RBP11.15□□□□□ -0.62
HMGCR-201ENST00000287936 SFMBT2Q5VUG0 894 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 C16orf86Q6ZW13 317 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 NKX2-3Q8TAU0 364 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 C7orf25Q9BPX7 421 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 HSD3B7Q9H2F3 369 aa11.15□□□□□ -0.62
HMGCR-201ENST00000287936 NHEJ1Q9H9Q4 299 aaPredicted RBP11.15□□□□□ -0.62
HMGCR-201ENST00000287936 PNMA6FA0A0J9YX94 578 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 HSF2BPO75031 334 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 TCP1P17987 556 aaKnown RBP11.14□□□□□ -0.63
HMGCR-201ENST00000287936 TNIP1Q15025 636 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 CEP95Q96GE4 821 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 MED4Q9NPJ6 270 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 SERPINB13Q9UIV8 391 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 BCL9LQ86UU0 1499 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 PALM3A6NDB9 673 aaPredicted RBP11.14□□□□□ -0.63
HMGCR-201ENST00000287936 NFIXQ14938 502 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 E2F4Q16254 413 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 SLFN12Q8IYM2 578 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 FNBP4Q8N3X1 1017 aaPredicted RBP11.14□□□□□ -0.63
HMGCR-201ENST00000287936 TRIM9Q9C026 710 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 PANK4Q9NVE7 773 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 HYOU1Q9Y4L1 999 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 PAPPAQ13219 1627 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.14□□□□□ -0.63
HMGCR-201ENST00000287936 ANO9A1A5B4 782 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 VAV2P52735 878 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 GPSM2P81274 684 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 ZNF622Q969S3 477 aaKnown RBP eCLIP11.14□□□□□ -0.636e-8■□□□□ 9.2
HMGCR-201ENST00000287936 ESYT2A0FGR8 921 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
HMGCR-201ENST00000287936 CCDC172P0C7W6 258 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 SRGNP10124 158 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 NOP2P46087 812 aaKnown RBP11.14□□□□□ -0.63
HMGCR-201ENST00000287936 RAPGEF1Q13905 1077 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 FAM71BQ8TC56 605 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 TNFRSF25Q93038 417 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 COA7Q96BR5 231 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 GPR101Q96P66 508 aaPredicted RBP11.14□□□□□ -0.63
HMGCR-201ENST00000287936 COA1Q9GZY4 146 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 TMEM60Q9H2L4 133 aa11.14□□□□□ -0.63
HMGCR-201ENST00000287936 USP17L5A8MUK1 530 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 CALUO43852 315 aaPredicted RBP11.13□□□□□ -0.63
HMGCR-201ENST00000287936 ALDH1B1P30837 517 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 ASIC2Q16515 512 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 LMBR1Q8WVP7 490 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 SELENOOQ9BVL4 669 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 NDST4Q9H3R1 872 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 DNA2P51530 1060 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 AEBP2Q6ZN18 517 aaPredicted RBP11.13□□□□□ -0.63
HMGCR-201ENST00000287936 GPBP1Q86WP2 473 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
HMGCR-201ENST00000287936 FAM107BQ9H098 131 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 GPR75-ASB3A0A0A6YYF3 556 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 SHTN1A0MZ66 631 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 EIF3CLB5ME19 914 aaKnown RBP11.13□□□□□ -0.63
HMGCR-201ENST00000287936 FKBP3Q00688 224 aaKnown RBP11.13□□□□□ -0.63
HMGCR-201ENST00000287936 EIF3CQ99613 913 aaKnown RBP11.13□□□□□ -0.63
HMGCR-201ENST00000287936 DNM3Q9UQ16 869 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 FLT1P17948 1338 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 FMNL3Q8IVF7 1028 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 GUF1Q8N442 669 aaKnown RBP11.13□□□□□ -0.63
HMGCR-201ENST00000287936 CCDC155Q8N6L0 562 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 AFAP1L1Q8TED9 768 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 CPVLQ9H3G5 476 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 PDE11AQ9HCR9 933 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 SUGT1Q9Y2Z0 365 aa11.13□□□□□ -0.63
HMGCR-201ENST00000287936 FAM205AQ6ZU69 1335 aa11.12□□□□□ -0.63
HMGCR-201ENST00000287936 LRRC10BA6NIK2 292 aa11.12□□□□□ -0.63
HMGCR-201ENST00000287936 EPB41P11171 864 aaKnown RBP11.12□□□□□ -0.63
HMGCR-201ENST00000287936 TNNC1P63316 161 aa11.12□□□□□ -0.63
HMGCR-201ENST00000287936 TMEM139Q8IV31 216 aa11.12□□□□□ -0.63
HMGCR-201ENST00000287936 PROM2Q8N271 834 aa11.12□□□□□ -0.63
HMGCR-201ENST00000287936 RAD54LQ92698 747 aa11.12□□□□□ -0.63
HMGCR-201ENST00000287936 EXOC4Q96A65 974 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms