RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 GREM2Q9H772 168 aa17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 EEF1GP26641 437 aaKnown RBP17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 ADCY1Q08828 1119 aa17.99■□□□□ 0.47
SH3RF1-201ENST00000284637 DDAH1O94760 285 aa17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 IRX1P78414 480 aaPredicted RBP17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 MFSD14BQ5SR56 506 aa17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 RAB20Q9NX57 234 aa17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 SUN1O94901 812 aa17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 FMNL1O95466 1100 aaPredicted RBP17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 LRRC41Q15345 812 aa17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 TAF11Q15544 211 aa17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 ALS2CLQ60I27 953 aa17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 GRK7Q8WTQ7 553 aa17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 NOP53Q9NZM5 478 aaKnown RBP17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 NOP56O00567 594 aaKnown RBP17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 MIER3Q7Z3K6 550 aa17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 GBP7Q8N8V2 638 aaPredicted RBP17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 ENOX1Q8TC92 643 aaKnown RBP17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 ATP2A3Q93084 1043 aa17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 CYP27A1Q02318 531 aa17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 DPP8Q6V1X1 898 aaPredicted RBP17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 RABGAP1Q9Y3P9 1069 aa17.98■□□□□ 0.47
SH3RF1-201ENST00000284637 CFAP61Q8NHU2 1237 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 MAGOHBQ96A72 148 aaKnown RBP17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 METTL14Q9HCE5 456 aaKnown RBP17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 KDM5DQ9BY66 1539 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 POLE2P56282 527 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 FAM102BQ5T8I3 360 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 PI16Q6UXB8 463 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 P2RX5Q93086 422 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 USP40Q9NVE5 1235 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 KIAA1024Q9UPX6 916 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 ATP8A1Q9Y2Q0 1164 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 KDM5AP29375 1690 aaKnown RBP17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 OPHN1O60890 802 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 PDE8BO95263 885 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 FTCDO95954 541 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 PCCAP05165 728 aaPredicted RBP17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 GTF2IP78347 998 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 NNTQ13423 1086 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 MESDQ14696 234 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 LLGL1Q15334 1064 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 KLHL29Q96CT2 875 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 K7ENM7 598 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 GIPC1O14908 333 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 SH3BP5O60239 455 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 ATF2P15336 505 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 RNF26Q9BY78 433 aaPredicted RBP17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 SCOCQ9UIL1 159 aa17.97■□□□□ 0.47
SH3RF1-201ENST00000284637 MOCS3O95396 460 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 NECTIN1Q15223 517 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 ZNF148Q9UQR1 794 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 USH1CQ9Y6N9 552 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 PRAMEF22A3QJZ6 481 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 COG7P83436 770 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 PDE1CQ14123 709 aaPredicted RBP17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 GALNT17Q6IS24 598 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 PLA2G4DQ86XP0 818 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 AFAP1L2Q8N4X5 818 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 COL4A3BPQ9Y5P4 624 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 PLXNC1O60486 1568 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 ZWINTO95229 277 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 DLATP10515 647 aaKnown RBP17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 PHBP35232 272 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 KAZNQ674X7 775 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 PASKQ96RG2 1323 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 PLTPP55058 493 aa17.96■□□□□ 0.47
SH3RF1-201ENST00000284637 POC1B-GALNT4F8VUJ3 575 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 OSBP2Q969R2 916 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 DHTKD1Q96HY7 919 aaPredicted RBP17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 ERVV-2B6SEH9 535 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 PPFIA2O75334 1257 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 PDE6CP51160 858 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 DIXDC1Q155Q3 683 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 ZNF710Q8N1W2 664 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 SMCR8Q8TEV9 937 aaPredicted RBP17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 LARP4BQ92615 738 aaKnown RBP17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 PICK1Q9NRD5 415 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 NR2F2P24468 414 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 HSPA2P54652 639 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 IRX4P78413 519 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 SLC7A5Q01650 507 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 TMCO4Q5TGY1 634 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 LRRC8CQ8TDW0 803 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 IWS1Q96ST2 819 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 NDUFA10O95299 355 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 MMP1P03956 469 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 NR1D1P20393 614 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 CACNB1Q02641 598 aaPredicted RBP17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 CHRNDQ07001 517 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 HSP90AA5PQ58FG0 334 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 ZNF658Q5TYW1 1059 aaPredicted RBP17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 SCYL2Q6P3W7 929 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 GSDMBQ8TAX9 411 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 GPHNQ9NQX3 736 aaPredicted RBP17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 TYW1Q9NV66 732 aaKnown RBP17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 PCDHB6Q9Y5E3 794 aa17.95■□□□□ 0.46
SH3RF1-201ENST00000284637 CTNND1O60716 968 aaKnown RBP17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 MRPS25P82663 173 aaKnown RBP17.94■□□□□ 0.46
SH3RF1-201ENST00000284637 TAF12Q16514 161 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms