RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 SBF2Q86WG5 1849 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 PPP1R3GB7ZBB8 358 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 AFMP43652 599 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 HLFQ16534 295 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 CREG2Q8IUH2 290 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 RASSF8Q8NHQ8 419 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 HOOK2Q96ED9 719 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 CCDC43Q96MW1 224 aaKnown RBP14.56□□□□□ -0.08
NUP54-201ENST00000264883 OSBPL7Q9BZF2 842 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 CNNM1Q9NRU3 951 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 STIM2Q9P246 746 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 CTNND2Q9UQB3 1225 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 LRP5O75197 1615 aa14.56□□□□□ -0.08
NUP54-201ENST00000264883 LRRC10BA6NIK2 292 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 ZNF233A6NK53 670 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 PDE8BO95263 885 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 ITGA6P23229 1130 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 MATR3P43243 847 aaKnown RBP eCLIP14.55□□□□□ -0.081e-9■■■■□ 19.8
NUP54-201ENST00000264883 ITIH3Q06033 890 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 DPYDQ12882 1025 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 TSR1Q2NL82 804 aaKnown RBP14.55□□□□□ -0.08
NUP54-201ENST00000264883 PAGE5Q96GU1 130 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 MYL10Q9BUA6 226 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 PPANQ9NQ55 473 aaKnown RBP14.55□□□□□ -0.08
NUP54-201ENST00000264883 PNPLA7Q6ZV29 1317 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 COBLO75128 1261 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 TNFRSF8P28908 595 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 SSR1P43307 286 aaKnown RBP14.55□□□□□ -0.08
NUP54-201ENST00000264883 PPARAQ07869 468 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 SPRED3Q2MJR0 410 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 FKBP15Q5T1M5 1219 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 SEPT12Q8IYM1 358 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 IQCKQ8N0W5 287 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 SPATA4Q8NEY3 305 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 TTLL11Q8NHH1 800 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 KCNJ14Q9UNX9 436 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 MYH3P11055 1940 aa14.55□□□□□ -0.08
NUP54-201ENST00000264883 TTC26A0AVF1 554 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 OPLAHO14841 1288 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 MGRN1O60291 552 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 PEX19P40855 299 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 SCTRP47872 440 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 CTSWP56202 376 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 UBXN1Q04323 297 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 XRCC4Q13426 336 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 PUM3Q15397 648 aaKnown RBP14.54□□□□□ -0.08
NUP54-201ENST00000264883 ACCSLQ4AC99 568 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 PPP4R3AQ6IN85 833 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 ZNF572Q7Z3I7 529 aaPredicted RBP14.54□□□□□ -0.08
NUP54-201ENST00000264883 LMBR1Q8WVP7 490 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 LPIN2Q92539 896 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 ATP6V1G3Q96LB4 118 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 LACRTQ9GZZ8 138 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 EPB41L4AQ9HCS5 686 aaPredicted RBP14.54□□□□□ -0.08
NUP54-201ENST00000264883 SNX12Q9UMY4 172 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 CASP1P29466 404 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 KRT2P35908 639 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 VAV2P52735 878 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 NBPF9Q3BBW0 867 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 CDCA2Q69YH5 1023 aaPredicted RBP14.54□□□□□ -0.08
NUP54-201ENST00000264883 USP49Q70CQ1 688 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 DZIP3Q86Y13 1208 aaKnown RBP14.54□□□□□ -0.08
NUP54-201ENST00000264883 FANCBQ8NB91 859 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 FAM89AQ96GI7 184 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 BSDC1Q9NW68 430 aaPredicted RBP14.54□□□□□ -0.08
NUP54-201ENST00000264883 RWDD2AQ9UIY3 292 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 LUC7L2Q9Y383 392 aaKnown RBP14.54□□□□□ -0.08
NUP54-201ENST00000264883 MROH5Q6ZUA9 1318 aa14.54□□□□□ -0.08
NUP54-201ENST00000264883 MACROD2A1Z1Q3 448 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 RCCD1A6NED2 376 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 HMGB1P1B2RPK0 211 aaPredicted RBP14.53□□□□□ -0.08
NUP54-201ENST00000264883 GUCY1A2P33402 732 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 SEMA3FQ13275 785 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 HAUS3Q68CZ6 603 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 NLRP10Q86W26 655 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 CD302Q8IX05 232 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 C3orf20Q8ND61 904 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 NKX2-3Q8TAU0 364 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 MICAL1Q8TDZ2 1067 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 TBC1D31Q96DN5 1066 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 SAAL1Q96ER3 474 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 DNAJC7Q99615 494 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 CABP5Q9NP86 173 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 RMND1Q9NWS8 449 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 GMNCA6NCL1 334 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 KCNJ18B7U540 433 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 BUB1BO60566 1050 aaPredicted RBP14.53□□□□□ -0.08
NUP54-201ENST00000264883 MBD4O95243 580 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 IPO7O95373 1038 aaKnown RBP14.53□□□□□ -0.08
NUP54-201ENST00000264883 ATP6V1G2O95670 118 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 RXRBP28702 533 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 CYLC1P35663 651 aaPredicted RBP14.53□□□□□ -0.08
NUP54-201ENST00000264883 ITGB3BPQ13352 177 aaPredicted RBP14.53□□□□□ -0.08
NUP54-201ENST00000264883 KCNJ12Q14500 433 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 GLE1Q53GS7 698 aaKnown RBP14.53□□□□□ -0.08
NUP54-201ENST00000264883 TCP11X2Q5H9J9 407 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 FAM182BQ5T319 152 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 WDR59Q6PJI9 974 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 ZNF654Q8IZM8 581 aa14.53□□□□□ -0.08
NUP54-201ENST00000264883 CCDC26Q8TAB7 109 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms