RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 FAM169AQ9Y6X4 670 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 SMCO2A6NFE2 343 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 ERLIN2O94905 339 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 ZBED6P86452 979 aa18.74■□□□□ 0.59
SGPP1-201ENST00000247225 POTEMA6NI47 508 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 AGPSO00116 658 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 MCM3P25205 808 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 GUCY1A3Q02108 690 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 NKX1-1Q15270 411 aaPredicted RBP18.73■□□□□ 0.59
SGPP1-201ENST00000247225 ODF2Q5BJF6 829 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 TTI2Q6NXR4 508 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 WDR93Q6P2C0 686 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 PPM1EQ8WY54 764 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 KRT12Q99456 494 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 RBM12Q9NTZ6 932 aaKnown RBP18.73■□□□□ 0.59
SGPP1-201ENST00000247225 TRAF5O00463 557 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 EEF1GP26641 437 aaKnown RBP18.73■□□□□ 0.59
SGPP1-201ENST00000247225 ALS2CR12Q96Q35 445 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 CCDC87Q9NVE4 849 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 PCDHA6Q9UN73 950 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 PCDHA8Q9Y5H6 950 aa18.73■□□□□ 0.59
SGPP1-201ENST00000247225 KLRF2D3W0D1 207 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 SLC1A4P43007 532 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 CARSP49589 748 aaKnown RBP18.72■□□□□ 0.59
SGPP1-201ENST00000247225 RAPGEF1Q13905 1077 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 IQCEQ6IPM2 695 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 PPANQ9NQ55 473 aaKnown RBP18.72■□□□□ 0.59
SGPP1-201ENST00000247225 SLAIN2Q9P270 581 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 ARHGAP20Q9P2F6 1191 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 CAPN7Q9Y6W3 813 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 EPS15P42566 896 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 TNNI2P48788 182 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 CLEC10AQ8IUN9 316 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 COA7Q96BR5 231 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 OSBPL9Q96SU4 736 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 DNAJC7Q99615 494 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 TRIM31Q9BZY9 425 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 MINPP1Q9UNW1 487 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 RASSF10A6NK89 507 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 DDAH1O94760 285 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 SRGNP10124 158 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 IL6STP40189 918 aaPredicted RBP18.72■□□□□ 0.59
SGPP1-201ENST00000247225 VAV2P52735 878 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 SEC24CP53992 1094 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 SAMD1Q6SPF0 538 aaPredicted RBP18.72■□□□□ 0.59
SGPP1-201ENST00000247225 CALML4Q96GE6 196 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 SALL4Q9UJQ4 1053 aa18.72■□□□□ 0.59
SGPP1-201ENST00000247225 FAM153BP0C7A2 387 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 HIBADHP31937 336 aaKnown RBP18.71■□□□□ 0.59
SGPP1-201ENST00000247225 FAM153CQ494X1 144 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 CFAP58Q5T655 872 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 SPTY2D1Q68D10 685 aaPredicted RBP18.71■□□□□ 0.59
SGPP1-201ENST00000247225 ADAT2Q7Z6V5 191 aaKnown RBP18.71■□□□□ 0.59
SGPP1-201ENST00000247225 FAM153AQ9UHL3 310 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 MST1RQ04912 1400 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 TMCO5BA8MYB1 307 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 KIAA0754O94854 1291 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 CCNE1P24864 410 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 ZNF507Q8TCN5 953 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 TRIM9Q9C026 710 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 FAM184BQ9ULE4 1060 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 SNX12Q9UMY4 172 aa18.71■□□□□ 0.59
SGPP1-201ENST00000247225 KLRC4O43908 158 aa18.71■□□□□ 0.58
SGPP1-201ENST00000247225 CORO7P57737 925 aa18.71■□□□□ 0.58
SGPP1-201ENST00000247225 POLR2FP61218 127 aaKnown RBP18.71■□□□□ 0.58
SGPP1-201ENST00000247225 OR2W6PQ8NHA6 318 aa18.71■□□□□ 0.58
SGPP1-201ENST00000247225 TBCKQ8TEA7 893 aa18.71■□□□□ 0.58
SGPP1-201ENST00000247225 NDST4Q9H3R1 872 aa18.71■□□□□ 0.58
SGPP1-201ENST00000247225 GPCPD1Q9NPB8 672 aa18.71■□□□□ 0.58
SGPP1-201ENST00000247225 PRPF6O94906 941 aaKnown RBP18.7■□□□□ 0.58
SGPP1-201ENST00000247225 INPP5BP32019 993 aa18.7■□□□□ 0.58
SGPP1-201ENST00000247225 PPP2R5BQ15173 497 aa18.7■□□□□ 0.58
SGPP1-201ENST00000247225 PAPD7Q5XG87 772 aaKnown RBP18.7■□□□□ 0.58
SGPP1-201ENST00000247225 ICE2Q659A1 982 aa18.7■□□□□ 0.58
SGPP1-201ENST00000247225 NSUN4Q96CB9 384 aaKnown RBP18.7■□□□□ 0.58
SGPP1-201ENST00000247225 SCN11AQ9UI33 1791 aa18.7■□□□□ 0.58
SGPP1-201ENST00000247225 PLEKHG2Q9H7P9 1386 aa18.7■□□□□ 0.58
SGPP1-201ENST00000247225 F8W031 263 aaPredicted RBP18.7■□□□□ 0.58
SGPP1-201ENST00000247225 HEXIM1O94992 359 aaKnown RBP18.7■□□□□ 0.58
SGPP1-201ENST00000247225 NNTQ13423 1086 aa18.7■□□□□ 0.58
SGPP1-201ENST00000247225 TADA2BQ86TJ2 420 aa18.7■□□□□ 0.58
SGPP1-201ENST00000247225 CREG2Q8IUH2 290 aa18.7■□□□□ 0.58
SGPP1-201ENST00000247225 TRIM58Q8NG06 486 aa18.7■□□□□ 0.58
SGPP1-201ENST00000247225 SEMA6BQ9H3T3 888 aa18.7■□□□□ 0.58
SGPP1-201ENST00000247225 THAP9Q9H5L6 903 aa18.7■□□□□ 0.58
SGPP1-201ENST00000247225 KCNQ2O43526 872 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 CYTH3O43739 400 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 KRT18P05783 430 aaKnown RBP18.69■□□□□ 0.58
SGPP1-201ENST00000247225 TUBBP07437 444 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 OR52Z1P0C646 297 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 GIMAP8Q8ND71 665 aaPredicted RBP18.69■□□□□ 0.58
SGPP1-201ENST00000247225 SH3RF3Q8TEJ3 882 aaPredicted RBP18.69■□□□□ 0.58
SGPP1-201ENST00000247225 IL17RBQ9NRM6 502 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 ADAMTS1Q9UHI8 967 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 BICDL2A1A5D9 508 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 TUBB4BP68371 445 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 SV2BQ7L1I2 683 aa18.69■□□□□ 0.58
SGPP1-201ENST00000247225 DDX42Q86XP3 938 aaKnown RBP eCLIP18.69■□□□□ 0.58
SGPP1-201ENST00000247225 PIGSQ96S52 555 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms