RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 P2RX5Q93086 422 aa18.83■□□□□ 0.61
SSPN-201ENST00000242729 ZMYND12Q9H0C1 365 aa18.83■□□□□ 0.61
SSPN-201ENST00000242729 KIAA1551Q9HCM1 1747 aa18.83■□□□□ 0.61
SSPN-201ENST00000242729 GSTO1P78417 241 aa18.83■□□□□ 0.6
SSPN-201ENST00000242729 ENOX2Q16206 610 aaKnown RBP18.83■□□□□ 0.6
SSPN-201ENST00000242729 DPP8Q6V1X1 898 aaPredicted RBP18.83■□□□□ 0.6
SSPN-201ENST00000242729 PYM1Q9BRP8 204 aaKnown RBP18.83■□□□□ 0.6
SSPN-201ENST00000242729 SEMA6BQ9H3T3 888 aa18.83■□□□□ 0.6
SSPN-201ENST00000242729 MPHOSPH10O00566 681 aaKnown RBP18.82■□□□□ 0.6
SSPN-201ENST00000242729 DNA2P51530 1060 aa18.82■□□□□ 0.6
SSPN-201ENST00000242729 KCNK18Q7Z418 384 aa18.82■□□□□ 0.6
SSPN-201ENST00000242729 NHEJ1Q9H9Q4 299 aaPredicted RBP18.82■□□□□ 0.6
SSPN-201ENST00000242729 VPS18Q9P253 973 aa18.82■□□□□ 0.6
SSPN-201ENST00000242729 AKR1B1P15121 316 aa18.82■□□□□ 0.6
SSPN-201ENST00000242729 KCTD19Q17RG1 926 aaPredicted RBP18.82■□□□□ 0.6
SSPN-201ENST00000242729 CCSER1Q9C0I3 900 aa18.82■□□□□ 0.6
SSPN-201ENST00000242729 PLEKHA4Q9H4M7 779 aa18.82■□□□□ 0.6
SSPN-201ENST00000242729 MMRN2Q9H8L6 949 aa18.82■□□□□ 0.6
SSPN-201ENST00000242729 POLD4Q9HCU8 107 aa18.82■□□□□ 0.6
SSPN-201ENST00000242729 SMARCAL1Q9NZC9 954 aa18.82■□□□□ 0.6
SSPN-201ENST00000242729 LRWD1Q9UFC0 647 aa18.82■□□□□ 0.6
SSPN-201ENST00000242729 LEMD3Q9Y2U8 911 aa18.82■□□□□ 0.6
SSPN-201ENST00000242729 PDS5AQ29RF7 1337 aaKnown RBP18.82■□□□□ 0.6
SSPN-201ENST00000242729 MYMKA6NI61 221 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 APBA1Q02410 837 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 SKIDA1Q1XH10 827 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 BEND6Q5SZJ8 279 aaPredicted RBP18.81■□□□□ 0.6
SSPN-201ENST00000242729 KCTD1Q719H9 257 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 GGA1Q9UJY5 639 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 TNRC6CQ9HCJ0 1690 aaKnown RBP18.81■□□□□ 0.6
SSPN-201ENST00000242729 LDHCP07864 332 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 LMAN1P49257 510 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 CACNB3P54284 484 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 RHBDL3P58872 404 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 CALCRLQ16602 461 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 C16orf86Q6ZW13 317 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 CCDC102AQ96A19 550 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 JAKMIP2Q96AA8 810 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 CDK5RAP3Q96JB5 506 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 CAPN11Q9UMQ6 739 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 SNED1Q8TER0 1413 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 CCDC151A5D8V7 595 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 TAL1P17542 331 aaPredicted RBP18.81■□□□□ 0.6
SSPN-201ENST00000242729 EEF1GP26641 437 aaKnown RBP18.81■□□□□ 0.6
SSPN-201ENST00000242729 MATR3P43243 847 aaKnown RBP eCLIP18.81■□□□□ 0.6
SSPN-201ENST00000242729 DOK7Q18PE1 504 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 THAP9Q9H5L6 903 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 JADE2Q9NQC1 790 aa18.81■□□□□ 0.6
SSPN-201ENST00000242729 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.81■□□□□ 0.6
SSPN-201ENST00000242729 CXCR5P32302 372 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 CYP2C19P33261 490 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 SNAP25P60880 206 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 KRT25Q7Z3Z0 450 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 ANKS1AQ92625 1134 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 TANGO6Q9C0B7 1094 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 COL5A3P25940 1745 aaPredicted RBP18.8■□□□□ 0.6
SSPN-201ENST00000242729 DLEC1Q9Y238 1755 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 MARCH6O60337 910 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 CCNE1P24864 410 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 TNNT3P45378 269 aaPredicted RBP18.8■□□□□ 0.6
SSPN-201ENST00000242729 HNRNPH2P55795 449 aaKnown RBP18.8■□□□□ 0.6
SSPN-201ENST00000242729 GRB10Q13322 594 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 TRIM14Q14142 442 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 KCNB1Q14721 858 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 MIIPQ5JXC2 388 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 C2CD5Q86YS7 1000 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 NEDD1Q8NHV4 660 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 CAGE1Q8TC20 777 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 CALML4Q96GE6 196 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 DNAJC7Q99615 494 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 DDX4Q9NQI0 724 aaKnown RBP18.8■□□□□ 0.6
SSPN-201ENST00000242729 EHD2Q9NZN4 543 aa18.8■□□□□ 0.6
SSPN-201ENST00000242729 RREB1Q92766 1687 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 SRGNP10124 158 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 PDHBP11177 359 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 FECHP22830 423 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 GNA11P29992 359 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 DNM2P50570 870 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 PPP4CP60510 307 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 AMPD2Q01433 879 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 ECM1Q16610 540 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 CCDC96Q2M329 555 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 RC3H1Q5TC82 1133 aaKnown RBP18.79■□□□□ 0.6
SSPN-201ENST00000242729 TMED8Q6PL24 325 aaPredicted RBP18.79■□□□□ 0.6
SSPN-201ENST00000242729 MLXIPQ9HAP2 919 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 USP21Q9UK80 565 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 NRAPQ86VF7 1730 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 ZNF263O14978 683 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 SNX29Q8TEQ0 813 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 BLOC1S4Q9NUP1 217 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 ZNHIT6Q9NWK9 470 aaKnown RBP18.79■□□□□ 0.6
SSPN-201ENST00000242729 PCDHAC2Q9Y5I4 1007 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 CCDC88AQ3V6T2 1871 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 COL22A1Q8NFW1 1626 aaPredicted RBP18.79■□□□□ 0.6
SSPN-201ENST00000242729 LAMB1P07942 1786 aa18.79■□□□□ 0.6
SSPN-201ENST00000242729 GPR75-ASB3A0A0A6YYF3 556 aa18.78■□□□□ 0.6
SSPN-201ENST00000242729 FAM193AP78312 1265 aa18.78■□□□□ 0.6
SSPN-201ENST00000242729 SV2BQ7L1I2 683 aa18.78■□□□□ 0.6
SSPN-201ENST00000242729 DAGLBQ8NCG7 672 aa18.78■□□□□ 0.6
SSPN-201ENST00000242729 PNMA5Q96PV4 448 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms