RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 CEP350Q5VT06 3117 aa12.73□□□□□ -0.37
CTSC-201ENST00000227266 MYH6P13533 1939 aa12.73□□□□□ -0.37
CTSC-201ENST00000227266 MEIS2O14770 477 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 CA12O43570 354 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 TLR2O60603 784 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 SLC25A27O95847 323 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 CCNA1P78396 465 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 FAM173BQ6P4H8 233 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 PIK3AP1Q6ZUJ8 805 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 FCHSD1Q86WN1 690 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 CCAR1Q8IX12 1150 aaKnown RBP12.72□□□□□ -0.37
CTSC-201ENST00000227266 CHST13Q8NET6 341 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 PGBD1Q96JS3 809 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 R3HDMLQ9H3Y0 253 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 ZSCAN16Q9H4T2 348 aaPredicted RBP12.72□□□□□ -0.37
CTSC-201ENST00000227266 MORF4L1Q9UBU8 362 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 CCDC194A0A1B0GVG4 234 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 FAM205CA6NFA0 338 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 M0R2N6 131 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
CTSC-201ENST00000227266 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 EARS2Q5JPH6 523 aaKnown RBP12.72□□□□□ -0.37
CTSC-201ENST00000227266 BRAPQ7Z569 592 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 TNFRSF25Q93038 417 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 PORCNQ9H237 461 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 FBXO40Q9UH90 709 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 ADGRA2Q96PE1 1338 aa12.72□□□□□ -0.37
CTSC-201ENST00000227266 PARP14Q460N5 1801 aa12.71□□□□□ -0.37
CTSC-201ENST00000227266 COPB2P35606 906 aa12.71□□□□□ -0.37
CTSC-201ENST00000227266 SLC30A10Q6XR72 485 aa12.71□□□□□ -0.37
CTSC-201ENST00000227266 RNF207Q6ZRF8 634 aa12.71□□□□□ -0.37
CTSC-201ENST00000227266 ANKRD35Q8N283 1001 aa12.71□□□□□ -0.37
CTSC-201ENST00000227266 CHAMP1Q96JM3 812 aa12.71□□□□□ -0.37
CTSC-201ENST00000227266 EFCC1Q9HA90 598 aa12.71□□□□□ -0.37
CTSC-201ENST00000227266 SPDYE3A6NKU9 549 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 PIK3CDO00329 1044 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 BCRP11274 1271 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 ATP2B1P20020 1258 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 CLK2P49760 499 aaKnown RBP12.7□□□□□ -0.38
CTSC-201ENST00000227266 HSD17B4P51659 736 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 RPS6P62753 249 aaKnown RBP12.7□□□□□ -0.38
CTSC-201ENST00000227266 BAATQ14032 418 aaPredicted RBP12.7□□□□□ -0.38
CTSC-201ENST00000227266 C17orf99Q6UX52 265 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 KRT25Q7Z3Z0 450 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 MROH8Q9H579 483 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 A1CFQ9NQ94 594 aaKnown RBP12.7□□□□□ -0.38
CTSC-201ENST00000227266 ATP6V1DQ9Y5K8 247 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 A0A0G2JMZ2 1700 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 TRPA1O75762 1119 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 TBC1D8O95759 1140 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 NONOQ15233 471 aaKnown RBP eCLIP12.7□□□□□ -0.38
CTSC-201ENST00000227266 INF2Q27J81 1249 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 SHCBP1Q8NEM2 672 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 SYTL5Q8TDW5 730 aaPredicted RBP12.7□□□□□ -0.38
CTSC-201ENST00000227266 RNF186Q9NXI6 227 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 CYP39A1Q9NYL5 469 aa12.7□□□□□ -0.38
CTSC-201ENST00000227266 FOSP01100 380 aaPredicted RBP12.69□□□□□ -0.38
CTSC-201ENST00000227266 NCLP19338 710 aaKnown RBP12.69□□□□□ -0.38
CTSC-201ENST00000227266 DNM1Q05193 864 aaKnown RBP12.69□□□□□ -0.38
CTSC-201ENST00000227266 AP3B2Q13367 1082 aa12.69□□□□□ -0.38
CTSC-201ENST00000227266 KCTD2Q14681 263 aa12.69□□□□□ -0.38
CTSC-201ENST00000227266 MYSM1Q5VVJ2 828 aa12.69□□□□□ -0.38
CTSC-201ENST00000227266 TBCKQ8TEA7 893 aa12.69□□□□□ -0.38
CTSC-201ENST00000227266 PURBQ96QR8 312 aaKnown RBP12.69□□□□□ -0.38
CTSC-201ENST00000227266 ANO3Q9BYT9 981 aa12.69□□□□□ -0.38
CTSC-201ENST00000227266 COL20A1Q9P218 1284 aa12.69□□□□□ -0.38
CTSC-201ENST00000227266 FCER1AP12319 257 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 MCM4P33991 863 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 GHRHRQ02643 423 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 L1TD1Q5T7N2 865 aaKnown RBP12.68□□□□□ -0.38
CTSC-201ENST00000227266 MCTP2Q6DN12 878 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 TEX2Q8IWB9 1127 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 GBP4Q96PP9 640 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 MMP19Q99542 508 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 MAP3K20Q9NYL2 800 aaKnown RBP12.68□□□□□ -0.38
CTSC-201ENST00000227266 NOL7Q9UMY1 257 aaKnown RBP12.68□□□□□ -0.38
CTSC-201ENST00000227266 IVNS1ABPQ9Y6Y0 642 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 PFASO15067 1338 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 COL11A1P12107 1806 aaPredicted RBP12.68□□□□□ -0.38
CTSC-201ENST00000227266 SMCHD1A6NHR9 2005 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 PGK2P07205 417 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 MAPK4P31152 587 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 UBXN2AP68543 259 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 CEBPZQ03701 1054 aaKnown RBP12.68□□□□□ -0.38
CTSC-201ENST00000227266 RILPL1Q5EBL4 403 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 SAMD3Q8N6K7 520 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 TAAR1Q96RJ0 339 aa12.68□□□□□ -0.38
CTSC-201ENST00000227266 FTOQ9C0B1 505 aaKnown RBP eCLIP12.68□□□□□ -0.38
CTSC-201ENST00000227266 TFIP11Q9UBB9 837 aaKnown RBP12.68□□□□□ -0.38
CTSC-201ENST00000227266 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
CTSC-201ENST00000227266 TOB1P50616 345 aaPredicted RBP12.67□□□□□ -0.38
CTSC-201ENST00000227266 CNTN2Q02246 1040 aa12.67□□□□□ -0.38
CTSC-201ENST00000227266 LETM2Q2VYF4 491 aa12.67□□□□□ -0.38
CTSC-201ENST00000227266 GPR142Q7Z601 462 aa12.67□□□□□ -0.38
CTSC-201ENST00000227266 ZNF396Q96N95 335 aaPredicted RBP12.67□□□□□ -0.38
CTSC-201ENST00000227266 RMDN3Q96TC7 470 aa12.67□□□□□ -0.38
CTSC-201ENST00000227266 EHMT1Q9H9B1 1298 aa12.67□□□□□ -0.38
CTSC-201ENST00000227266 EIF2AK2P19525 551 aaKnown RBP12.66□□□□□ -0.38
CTSC-201ENST00000227266 ARHGAP4P98171 946 aa12.66□□□□□ -0.38
CTSC-201ENST00000227266 ARHGEF16Q5VV41 709 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms