RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 ACVR2BQ13705 512 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 SLC30A10Q6XR72 485 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 TMTC3Q6ZXV5 915 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 TEX2Q8IWB9 1127 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 ARRDC4Q8NCT1 418 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 MYL10Q9BUA6 226 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 HTATIP2Q9BUP3 242 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 ZSWIM6Q9HCJ5 1215 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 VAT1LQ9HCJ6 419 aa20.19■□□□□ 0.82
MRPL28-201ENST00000199706 CEP290O15078 2479 aa20.18■□□□□ 0.82
MRPL28-201ENST00000199706 ZBTB43O43298 467 aa20.18■□□□□ 0.82
MRPL28-201ENST00000199706 RARBP10826 455 aa20.18■□□□□ 0.82
MRPL28-201ENST00000199706 ALDH5A1P51649 535 aaPredicted RBP20.18■□□□□ 0.82
MRPL28-201ENST00000199706 HSD17B4P51659 736 aa20.18■□□□□ 0.82
MRPL28-201ENST00000199706 EVCP57679 992 aa20.18■□□□□ 0.82
MRPL28-201ENST00000199706 MICU3Q86XE3 530 aa20.18■□□□□ 0.82
MRPL28-201ENST00000199706 RRP36Q96EU6 259 aaKnown RBP20.18■□□□□ 0.82
MRPL28-201ENST00000199706 PIGSQ96S52 555 aa20.18■□□□□ 0.82
MRPL28-201ENST00000199706 VTA1Q9NP79 307 aa20.18■□□□□ 0.82
MRPL28-201ENST00000199706 FAM184BQ9ULE4 1060 aa20.18■□□□□ 0.82
MRPL28-201ENST00000199706 PCDHA1Q9Y5I3 950 aa20.18■□□□□ 0.82
MRPL28-201ENST00000199706 OPLAHO14841 1288 aa20.17■□□□□ 0.82
MRPL28-201ENST00000199706 CASTP20810 708 aaKnown RBP20.17■□□□□ 0.82
MRPL28-201ENST00000199706 NKX3-2P78367 333 aa20.17■□□□□ 0.82
MRPL28-201ENST00000199706 PRAMEF19Q5SWL8 479 aa20.17■□□□□ 0.82
MRPL28-201ENST00000199706 RUFY3Q7L099 469 aa20.17■□□□□ 0.82
MRPL28-201ENST00000199706 SEC63Q9UGP8 760 aaKnown RBP20.17■□□□□ 0.82
MRPL28-201ENST00000199706 DUSP11O75319 330 aaKnown RBP20.16■□□□□ 0.82
MRPL28-201ENST00000199706 FGD1P98174 961 aa20.16■□□□□ 0.82
MRPL28-201ENST00000199706 HOMER1Q86YM7 354 aa20.16■□□□□ 0.82
MRPL28-201ENST00000199706 SRBD1Q8N5C6 995 aaKnown RBP20.16■□□□□ 0.82
MRPL28-201ENST00000199706 SYTL5Q8TDW5 730 aaPredicted RBP20.16■□□□□ 0.82
MRPL28-201ENST00000199706 PAWRQ96IZ0 340 aaKnown RBP20.16■□□□□ 0.82
MRPL28-201ENST00000199706 TCEANC2Q96MN5 208 aa20.16■□□□□ 0.82
MRPL28-201ENST00000199706 ZHX1Q9UKY1 873 aaPredicted RBP20.16■□□□□ 0.82
MRPL28-201ENST00000199706 BRPF3Q9ULD4 1205 aa20.16■□□□□ 0.82
MRPL28-201ENST00000199706 DNAH12Q6ZR08 3092 aa20.16■□□□□ 0.82
MRPL28-201ENST00000199706 KLF18A0A0U1RQI7 1052 aa20.15■□□□□ 0.82
MRPL28-201ENST00000199706 CCDC196A0A1B0GTZ2 297 aa20.15■□□□□ 0.82
MRPL28-201ENST00000199706 PLEKHA8P1O95397 391 aa20.15■□□□□ 0.82
MRPL28-201ENST00000199706 CALML3P27482 149 aa20.15■□□□□ 0.82
MRPL28-201ENST00000199706 RTN1Q16799 776 aa20.15■□□□□ 0.82
MRPL28-201ENST00000199706 Q6ZUG5 572 aa20.15■□□□□ 0.82
MRPL28-201ENST00000199706 IWS1Q96ST2 819 aa20.15■□□□□ 0.82
MRPL28-201ENST00000199706 C11orf49Q9H6J7 331 aa20.15■□□□□ 0.82
MRPL28-201ENST00000199706 CYP46A1Q9Y6A2 500 aa20.15■□□□□ 0.82
MRPL28-201ENST00000199706 ALPK3Q96L96 1907 aa20.15■□□□□ 0.82
MRPL28-201ENST00000199706 CST5P28325 142 aaPredicted RBP20.14■□□□□ 0.81
MRPL28-201ENST00000199706 FUT2Q10981 343 aa20.14■□□□□ 0.81
MRPL28-201ENST00000199706 CCDC144BQ3MJ40 725 aa20.14■□□□□ 0.81
MRPL28-201ENST00000199706 NSUN6Q8TEA1 469 aaKnown RBP20.14■□□□□ 0.81
MRPL28-201ENST00000199706 DIS3LQ8TF46 1054 aaKnown RBP20.14■□□□□ 0.81
MRPL28-201ENST00000199706 UPF3AQ9H1J1 476 aaKnown RBP20.14■□□□□ 0.81
MRPL28-201ENST00000199706 XPNPEP3Q9NQH7 507 aa20.14■□□□□ 0.81
MRPL28-201ENST00000199706 CNTNAP5Q8WYK1 1306 aa20.13■□□□□ 0.81
MRPL28-201ENST00000199706 RBM47A0AV96 593 aaKnown RBP20.13■□□□□ 0.81
MRPL28-201ENST00000199706 KBTBD13C9JR72 458 aa20.13■□□□□ 0.81
MRPL28-201ENST00000199706 hCG_1984214I3L0E3 225 aa20.13■□□□□ 0.81
MRPL28-201ENST00000199706 ADAMTS4O75173 837 aa20.13■□□□□ 0.81
MRPL28-201ENST00000199706 RXRAP19793 462 aa20.13■□□□□ 0.81
MRPL28-201ENST00000199706 IQSEC1Q6DN90 963 aa20.13■□□□□ 0.81
MRPL28-201ENST00000199706 RNF180Q86T96 592 aa20.13■□□□□ 0.81
MRPL28-201ENST00000199706 ZNF713Q8N859 430 aaPredicted RBP20.13■□□□□ 0.81
MRPL28-201ENST00000199706 BRF1Q92994 677 aa20.13■□□□□ 0.81
MRPL28-201ENST00000199706 TSEN34Q9BSV6 310 aaKnown RBP20.13■□□□□ 0.81
MRPL28-201ENST00000199706 Q9Y3F1 56 aa20.13■□□□□ 0.81
MRPL28-201ENST00000199706 KIAA1217Q5T5P2 1943 aa20.13■□□□□ 0.81
MRPL28-201ENST00000199706 FRMPD4Q14CM0 1322 aa20.12■□□□□ 0.81
MRPL28-201ENST00000199706 SYNRGQ9UMZ2 1314 aa20.12■□□□□ 0.81
MRPL28-201ENST00000199706 GOLGA8AA7E2F4 631 aa20.12■□□□□ 0.81
MRPL28-201ENST00000199706 GOLGA8BA8MQT2 603 aa20.12■□□□□ 0.81
MRPL28-201ENST00000199706 PIK3CDO00329 1044 aa20.12■□□□□ 0.81
MRPL28-201ENST00000199706 CPA1P15085 419 aa20.12■□□□□ 0.81
MRPL28-201ENST00000199706 LRRC41Q15345 812 aa20.12■□□□□ 0.81
MRPL28-201ENST00000199706 PRPF38BQ5VTL8 546 aaKnown RBP20.12■□□□□ 0.81
MRPL28-201ENST00000199706 TAPT1Q6NXT6 567 aa20.12■□□□□ 0.81
MRPL28-201ENST00000199706 PURBQ96QR8 312 aaKnown RBP20.12■□□□□ 0.81
MRPL28-201ENST00000199706 ALDH8A1Q9H2A2 487 aaPredicted RBP20.12■□□□□ 0.81
MRPL28-201ENST00000199706 COL20A1Q9P218 1284 aa20.12■□□□□ 0.81
MRPL28-201ENST00000199706 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
MRPL28-201ENST00000199706 GCOM1H8Y6P7 765 aaPredicted RBP20.11■□□□□ 0.81
MRPL28-201ENST00000199706 CFBP00751 764 aa20.11■□□□□ 0.81
MRPL28-201ENST00000199706 POLR2MP0CAP2 368 aa20.11■□□□□ 0.81
MRPL28-201ENST00000199706 METAP2P50579 478 aaKnown RBP eCLIP20.11■□□□□ 0.81
MRPL28-201ENST00000199706 GJA9P57773 515 aa20.11■□□□□ 0.81
MRPL28-201ENST00000199706 PDE4DQ08499 809 aa20.11■□□□□ 0.81
MRPL28-201ENST00000199706 PPP1R18Q6NYC8 613 aa20.11■□□□□ 0.81
MRPL28-201ENST00000199706 KLHDC9Q8NEP7 349 aa20.11■□□□□ 0.81
MRPL28-201ENST00000199706 RMDN3Q96TC7 470 aa20.11■□□□□ 0.81
MRPL28-201ENST00000199706 SPC25Q9HBM1 224 aa20.11■□□□□ 0.81
MRPL28-201ENST00000199706 FAM217BQ9NTX9 383 aaPredicted RBP20.11■□□□□ 0.81
MRPL28-201ENST00000199706 PHF24Q9UPV7 400 aa20.11■□□□□ 0.81
MRPL28-201ENST00000199706 GNEQ9Y223 722 aaKnown RBP20.11■□□□□ 0.81
MRPL28-201ENST00000199706 ADCY6O43306 1168 aa20.1■□□□□ 0.81
MRPL28-201ENST00000199706 TNFAIP2Q03169 654 aa20.1■□□□□ 0.81
MRPL28-201ENST00000199706 APOBRQ0VD83 1088 aa20.1■□□□□ 0.81
MRPL28-201ENST00000199706 SNX17Q15036 470 aa20.1■□□□□ 0.81
MRPL28-201ENST00000199706 C1orf53Q5VUE5 145 aa20.1■□□□□ 0.81
MRPL28-201ENST00000199706 FBXO16Q8IX29 292 aaPredicted RBP20.1■□□□□ 0.81
MRPL28-201ENST00000199706 SCFD2Q8WU76 684 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms